FC868508

Overview
NameFC868508
Unique NameFC868508
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length677
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig13756 contig Ccv1_Contig13756:35..711. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: FAL1_ASPCL (ATP-dependent RNA helicase fal1 OS=Aspergillus clavatus GN=fal1 PE=3 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 2.495e-65
Identity = 113/183 (61.75%), Postives = 153/183 (83.61%), Query Frame = 3
Query:  129 KMVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRY 677
            ++ F T++ V    +F+ M +K+ LLRGIY YG+E PSA+Q RA++ I KGRD IAQAQSGTGKT+  ++++ Q +DT+ RE QAL+LSPTRELATQ + V++A+GD++N+Q HAC+GG ++GEDIRKL++G HVVSGTPGRV DMI+R+ LRTR IK+LVLDE+DE+L+RGF++QIYDVYRY
Sbjct:   12 RLEFSTSKEVTVAPTFEDMHLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISILQVIDTAVRETQALVLSPTRELATQIQSVIMALGDYMNVQCHACIGGTNIGEDIRKLDYGQHVVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNRGFREQIYDVYRY 194          
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: FAL1_MAGGR (ATP-dependent RNA helicase FAL1 OS=Magnaporthe grisea GN=FAL1 PE=3 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 3.259e-65
Identity = 113/183 (61.75%), Postives = 154/183 (84.15%), Query Frame = 3
Query:  129 KMVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRY 677
            +M F T++ V    +F++M +K+ LLRGIY YG+E PSA+Q RA++ + KGRD IAQAQSGTGKT+  ++++ Q +DT+ RE QAL+LSPTRELATQ + VV+A+GD++N+Q HAC+GG +VGEDIRKL++G H+VSGTPGRV DMI+R+ LRTR IK+LVLDE+DE+L++GF++QIYDVYRY
Sbjct:   14 RMEFTTSKEVTVHPTFESMALKESLLRGIYAYGYESPSAVQSRAIVQVCKGRDTIAQAQSGTGKTATFSISMLQVIDTAVRETQALVLSPTRELATQIQSVVMALGDYMNVQCHACIGGTNVGEDIRKLDYGQHIVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNQGFREQIYDVYRY 196          
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: FAL1_ASPOR (ATP-dependent RNA helicase fal1 OS=Aspergillus oryzae GN=fal1 PE=3 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 4.256e-65
Identity = 114/183 (62.30%), Postives = 152/183 (83.06%), Query Frame = 3
Query:  129 KMVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRY 677
            +M F T++ V    +F+ M +K+ LLRGIY YG+E PSA+Q RA++ I KGRD IAQAQSGTGKT+  ++++ Q +DT  RE QAL+LSPTRELATQ + V++A+GD++N+Q HAC+GG ++GEDIRKL++G HVVSGTPGRV DMI+R+ LRTR IK+LVLDE+DE+L+RGF++QIYDVYRY
Sbjct:   11 RMEFNTSKEVTVAPTFEDMHLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISILQVIDTVVRESQALVLSPTRELATQIQSVIMALGDYMNVQCHACIGGTNIGEDIRKLDYGQHVVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNRGFREQIYDVYRY 193          
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: FAL1_ASPNC (ATP-dependent RNA helicase fal1 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=fal1 PE=3 SV=2)

HSP 1 Score: 247.669 bits (631), Expect = 4.256e-65
Identity = 114/183 (62.30%), Postives = 152/183 (83.06%), Query Frame = 3
Query:  129 KMVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRY 677
            +M F T++ V    +F+ M +K+ LLRGIY YG+E PSA+Q RA++ I KGRD IAQAQSGTGKT+  ++++ Q +DT  RE QAL+LSPTRELATQ + V++A+GD++N+Q HAC+GG ++GEDIRKL++G HVVSGTPGRV DMI+R+ LRTR IK+LVLDE+DE+L+RGF++QIYDVYRY
Sbjct:   12 RMEFNTSKEVTVAPTFEDMHLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISILQVIDTVVRESQALVLSPTRELATQIQSVIMALGDYMNVQCHACIGGTNIGEDIRKLDYGQHVVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNRGFREQIYDVYRY 194          
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: FAL1_NEOFI (ATP-dependent RNA helicase fal1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=fal1 PE=3 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 5.559e-65
Identity = 113/183 (61.75%), Postives = 152/183 (83.06%), Query Frame = 3
Query:  129 KMVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRY 677
            ++ F T++ V    +F+ M +K+ LLRGIY YG+E PSA+Q RA++ I KGRD IAQAQSGTGKT+  ++++ Q +DT  RE QAL+LSPTRELATQ + V++A+GD++N+Q HAC+GG ++GEDIRKL++G HVVSGTPGRV DMI+R+ LRTR IK+LVLDE+DE+L+RGF++QIYDVYRY
Sbjct:   12 RLEFSTSKEVTVAPTFEDMHLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISILQVIDTVVRETQALVLSPTRELATQIQSVIMALGDYMNVQCHACIGGTNIGEDIRKLDYGQHVVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNRGFREQIYDVYRY 194          
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: FAL1_ASPFU (ATP-dependent RNA helicase fal1 OS=Aspergillus fumigatus GN=fal1 PE=3 SV=2)

HSP 1 Score: 246.128 bits (627), Expect = 1.238e-64
Identity = 113/183 (61.75%), Postives = 151/183 (82.51%), Query Frame = 3
Query:  129 KMVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRY 677
            ++ F T++ V    +F+ M +K+ LLRGIY YG+E PSA+Q RA++ I KGRD IAQAQSGTGKT+  ++ + Q +DT  RE QAL+LSPTRELATQ + V++A+GD++N+Q HAC+GG ++GEDIRKL++G HVVSGTPGRV DMI+R+ LRTR IK+LVLDE+DE+L+RGF++QIYDVYRY
Sbjct:   11 RLEFSTSKEVTVAPTFEDMHLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSIGILQVIDTVVRETQALVLSPTRELATQIQSVIMALGDYMNVQCHACIGGTNIGEDIRKLDYGQHVVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNRGFREQIYDVYRY 193          
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: IF4A_DICDI (Eukaryotic initiation factor 4A OS=Dictyostelium discoideum GN=tifA PE=3 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 4.404e-62
Identity = 114/178 (64.04%), Postives = 146/178 (82.02%), Query Frame = 3
Query:  144 TTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRY 677
            T+  VE   +F++MG++++LLRGI+ YGFEKPSAIQQRA++PIIKGRD IAQAQSGTGKT+  ++   Q V+ + R  Q LILSPTRELA Q +KV LA+ +F+NIQ HACVGGK++ +D++KLE GVH+VSGTPGRV DMI RK+L TR IK+++LDE+DEMLS GF+ QI DVYRY
Sbjct:   24 TSSEVEVKPTFESMGLREELLRGIFNYGFEKPSAIQQRAILPIIKGRDTIAQAQSGTGKTATFSIGALQCVEVNVRSPQVLILSPTRELAQQIQKVALALSEFMNIQVHACVGGKNLSDDVKKLETGVHIVSGTPGRVLDMITRKSLPTRHIKMMILDEADEMLSLGFQQQINDVYRY 201          
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: FAL1_YARLI (ATP-dependent RNA helicase FAL1 OS=Yarrowia lipolytica GN=FAL1 PE=3 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 4.404e-62
Identity = 108/183 (59.02%), Postives = 150/183 (81.97%), Query Frame = 3
Query:  129 KMVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRY 677
            ++ F+T++ V+   +F++M +KDDLLRGIY YGFE PSAIQ RA+  IIKGRD IAQAQSGTGKT+  ++++ + +DT  RE QA++LSPTRELATQ + V+LA+GD++N+Q HAC+GG S+  D++KLE G  VVSGTPGR  DMIK+  LRT+ +K+L+LDE+DE+L++GF++QIYD+YRY
Sbjct:   11 ELEFKTSKDVDVTPTFESMDLKDDLLRGIYAYGFEAPSAIQSRAITQIIKGRDTIAQAQSGTGKTATFSISMLEVIDTKHRETQAMVLSPTRELATQIQSVILALGDYMNVQCHACIGGTSLSVDMKKLEAGQQVVSGTPGRCLDMIKKGCLRTKNLKMLILDEADELLNKGFQEQIYDIYRY 193          
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: IF4A_DROME (Eukaryotic initiation factor 4A OS=Drosophila melanogaster GN=eIF-4a PE=2 SV=3)

HSP 1 Score: 234.187 bits (596), Expect = 4.870e-61
Identity = 112/172 (65.12%), Postives = 142/172 (82.56%), Query Frame = 3
Query:  159 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYR 674
            E   +FD M ++++LLRGIY YGFEKPSAIQQRA++P ++GRDVIAQAQSGTGKT+  ++ + Q +DTS RE QALIL+PTRELATQ ++VV+A+G+++ + +HAC+GG +V ED R LE G HVV GTPGRV DMI RK LRT+ IKL VLDE+DEMLSRGFKDQI DV++
Sbjct:   27 EVYDNFDDMNLREELLRGIYGYGFEKPSAIQQRAIIPCVRGRDVIAQAQSGTGKTATFSIAILQQIDTSIRECQALILAPTRELATQIQRVVMALGEYMKVHSHACIGGTNVREDARILESGCHVVVGTPGRVYDMINRKVLRTQYIKLFVLDEADEMLSRGFKDQIQDVFK 198          
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: FAL1_CANAL (ATP-dependent RNA helicase FAL1 OS=Candida albicans GN=FAL1 PE=3 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 3.156e-60
Identity = 105/179 (58.66%), Postives = 147/179 (82.12%), Query Frame = 3
Query:  141 ETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRY 677
            ++T+G++   +F++M +K DLL+GIY YGFE PSAIQ RA+M II GRD IAQAQSGTGKT+  ++ + + +DT S+E QALILSPTRELA Q + VV  +GD++NI  HAC+GGK+VGED++KL+ G  +VSGTPGRV D+IKR+ L+TR IK+L+LDE+DE+ ++GFK+QIY++Y++
Sbjct:   17 KSTKGIKVHRTFESMNLKPDLLKGIYAYGFETPSAIQSRAIMQIISGRDTIAQAQSGTGKTATFSIGMLEVIDTKSKECQALILSPTRELAIQIQNVVKHLGDYMNIHTHACIGGKNVGEDVKKLQQGQQIVSGTPGRVIDVIKRRNLQTRNIKVLILDEADELFTKGFKEQIYEIYKH 195          
The following BLAST results are available for this feature:
BLAST of FC868508 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FAL1_ASPCL2.495e-6561.75ATP-dependent RNA helicase fal1 OS=Aspergillus cla... [more]
FAL1_MAGGR3.259e-6561.75ATP-dependent RNA helicase FAL1 OS=Magnaporthe gri... [more]
FAL1_ASPOR4.256e-6562.30ATP-dependent RNA helicase fal1 OS=Aspergillus ory... [more]
FAL1_ASPNC4.256e-6562.30ATP-dependent RNA helicase fal1 OS=Aspergillus nig... [more]
FAL1_NEOFI5.559e-6561.75ATP-dependent RNA helicase fal1 OS=Neosartorya fis... [more]
FAL1_ASPFU1.238e-6461.75ATP-dependent RNA helicase fal1 OS=Aspergillus fum... [more]
IF4A_DICDI4.404e-6264.04Eukaryotic initiation factor 4A OS=Dictyostelium d... [more]
FAL1_YARLI4.404e-6259.02ATP-dependent RNA helicase FAL1 OS=Yarrowia lipoly... [more]
IF4A_DROME4.870e-6165.12Eukaryotic initiation factor 4A OS=Drosophila mela... [more]
FAL1_CANAL3.156e-6058.66ATP-dependent RNA helicase FAL1 OS=Candida albican... [more]

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Properties
Property NameValue
Genbank descriptionC31001C05EF AbioticL1 Citrus clementina cDNA clone C31001C05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868508 ID=FC868508; Name=FC868508; organism=Citrus clementina; type=EST; length=677bp
GCTCACCTGGAAGAGGAAACTCTCATTGATTCTTTGATTTCGAAGAGTAA
TTGTTGCGAATTTCGTGCGAGATGGCGGCGGCGACGGCTATGCGGAGGAG
AGGAGGGGGCGGCGGAATGGATGACGACAAGATGGTGTTCGAAACAACGG
AAGGAGTGGAGGCAATCACGAGCTTCGACGCAATGGGAATAAAAGACGAT
CTGTTGCGTGGAATTTATCAGTACGGATTCGAGAAGCCATCGGCCATACA
ACAGAGGGCCGTTATGCCGATTATAAAGGGCCGTGATGTAATTGCACAGG
CCCAGTCTGGTACTGGCAAGACCTCTATGATTGCCCTAACTGTTTGCCAG
ACGGTCGATACTTCTAGCAGAGAGGTGCAGGCGTTGATTTTGTCACCTAC
GAGGGAGCTGGCGACGCAGACAGAGAAAGTGGTTTTGGCAATTGGTGATT
TTATTAACATACAAGCACATGCGTGTGTTGGAGGCAAAAGTGTCGGGGAA
GATATTAGGAAGTTAGAGCATGGAGTTCATGTGGTGTCTGGAACTCCGGG
TAGAGTCTGTGATATGATTAAGAGGAAAACTTTGCGTACTAGAGCTATTA
AATTATTGGTGCTTGATGAGTCTGATGAGATGCTGAGCAGAGGGTTCAAG
GATCAAATTTATGATGTGTACCGTTAT
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