FC868508
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: DBP10_YARLI (ATP-dependent RNA helicase DBP10 OS=Yarrowia lipolytica GN=DBP10 PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.170e-20 Identity = 52/174 (29.89%), Postives = 100/174 (57.47%), Query Frame = 3 Query: 153 GVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREV--QALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDV 668 G ++ SF +G+ +L+ I + GF++P+ IQ++ + +++G+DV+ A++G+GKT+ L + + + S +V +A+ILSP+RELA QT KVV +++ VGG S+ E + + ++ TPGR + L +++ + DE+D + GF +Q+ ++ Sbjct: 97 GKKSSGSFAGLGLSQLVLKNIARKGFKQPTPIQRKTIPLVLEGKDVVGMARTGSGKTAAFVLPMLEKLKVHSAKVGARAVILSPSRELALQTLKVVKDFSAGTDLRLAMLVGGDSLEEQFKMMMSNPDIIIATPGRFLHLKVEMELSLASVEYICFDEADRLFELGFGEQMNEL 270
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: DBP10_SCLS1 (ATP-dependent RNA helicase dbp10 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=dbp10 PE=3 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 4.170e-20 Identity = 55/167 (32.93%), Postives = 93/167 (55.69%), Query Frame = 3 Query: 174 FDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREV--QALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDV 668 F AMG+ LL+ I + GF P+ IQ++ + ++ +DV+ A++G+GKT+ + + + + S V +ALI+SP+RELA QT KVV G +++ VGG S+ E + +V TPGR + +L ++K +V DE+D + GF Q+ ++ Sbjct: 90 FQAMGLNSHLLKAISRKGFNVPTPIQRKTIPLVLDNQDVVGMARTGSGKTAAFVIPMIEKLRAHSVRVGARALIMSPSRELALQTLKVVKEFGRGTDLKCVLLVGGDSLEEQFGFMAANPDIVIATPGRFLHLKVEMSLDLSSMKYVVFDEADRLFEMGFAAQLGEI 256
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: DBP10_CANAL (ATP-dependent RNA helicase DBP10 OS=Candida albicans GN=DBP10 PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.170e-20 Identity = 55/169 (32.54%), Postives = 97/169 (57.40%), Query Frame = 3 Query: 171 SFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSRE---VQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDV 668 SF + G+ +L I + G+++P+ IQ++ + I++GRDV+ A++G+GKT+ L + + + SR+ V+A+ILSP+RELA QT K V N+Q+ +GG S+ ED K+ ++ TPGR + ++ +V DE+D + GF +Q+ ++ Sbjct: 100 SFASFGLTKFILANIAKKGYKQPTPIQRKTIPLIMEGRDVVGMARTGSGKTAAFVLPLIERL--KSRQPGGVRAVILSPSRELALQTYKQVKEFSHGTNLQSIVLIGGDSLEEDFSKMMTKPDIIVCTPGRFLHLKVEMQYDLMTVQYIVFDEADRLFEMGFAEQLNEL 266
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: DBP10_AJECN (ATP-dependent RNA helicase DBP10 OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=DBP10 PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.170e-20 Identity = 52/167 (31.14%), Postives = 96/167 (57.49%), Query Frame = 3 Query: 174 FDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREV--QALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDV 668 F ++G+ LL+ I + GF P+ IQ++ + ++ +DV+ A++G+GKT+ + + + + + S + +ALILSP+RELA QT KVV +G ++++ VGG S+ E + ++ TPGR + +L +I+ +V DE+D + GF Q+ ++ Sbjct: 88 FQSLGLNAALLKAITRKGFSVPTPIQRKTIPLVLDDQDVVGMARTGSGKTAAFVIPMIEKLKSHSAKFGSRALILSPSRELALQTLKVVKELGRGTDLKSVLLVGGDSLEEQFEYMASNPDIIIATPGRFLHLKVEMSLDLSSIRYVVFDEADRLFEMGFATQLTEI 254
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: RH53_ORYSJ (DEAD-box ATP-dependent RNA helicase 53 OS=Oryza sativa subsp. japonica GN=Os07g0143700 PE=2 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 5.447e-20 Identity = 55/165 (33.33%), Postives = 92/165 (55.76%), Query Frame = 3 Query: 183 MGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTV------DTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQI 659 +GI ++ + G + IQ+ + P ++G+D+I +A++GTGKT + + + + S R A+IL+PTRELA Q EK + + + GG + +R L +GV VV GTPGR+ D+++R L I+ +VLDE+D+ML+ GF + + Sbjct: 89 LGISPWIVERLAARGITRLFPIQRAVLDPAMQGKDMIGRARTGTGKTLAFGIPIMDRILRHNEKNGSGRNPLAIILAPTRELARQVEK---EFKESAPLDSLCVYGGVPISHQMRALNYGVDVVVGTPGRIIDLLRRGVLNLSEIQFVVLDEADQMLAVGFDEDV 250
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: RH52B_ORYSJ (DEAD-box ATP-dependent RNA helicase 52B OS=Oryza sativa subsp. japonica GN=PL10B PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.447e-20 Identity = 59/173 (34.10%), Postives = 93/173 (53.76%), Query Frame = 3 Query: 171 SFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTS--------SREVQ--ALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQI 659 +F + + D L I + + KP+ +Q+ A+ I GRD++A AQ+G+GKT+ + + S SR ALILSPTREL+ Q + ++ GG + + +R+LE GV ++ TPGR+ D+++R + + IK L LDE+D ML GF+ QI Sbjct: 170 TFAEIDLGDALNENIRRCKYVKPTPVQRYAIPISIAGRDLMACAQTGSGKTAAFCFPIISGIMRSRPPPRSRGSRTAYPLALILSPTRELSVQIHEEARKFAYQTGVKVVVAYGGAPITQQLRELERGVEILVATPGRLMDLLERARVSLQMIKYLALDEADRMLDMGFEPQI 342
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: DBP5_COCIM (ATP-dependent RNA helicase DBP5 OS=Coccidioides immitis GN=DBP5 PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.447e-20 Identity = 61/172 (35.47%), Postives = 101/172 (58.72%), Query Frame = 3 Query: 162 AITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGR---DVIAQAQSGTGKTSMIALTVCQTVDTS---SREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEML-SRGFKDQ 656 +I SF+ +G+ + + G+ + F +PS IQ+RA +P++ ++IAQ+QSGTGKT+ L + ++ + + QAL+L+P+RELA Q V+ A+G F+ A + + R +V GTPG V D+IK++ T+ +++LVLDE+D ML +G DQ Sbjct: 90 SIKSFEELGLAEPIQMGLSKMNFRRPSKIQERA-LPLLMANPPTNMIAQSQSGTGKTAAFVLNILSRLELTPEKQKSPQALVLAPSRELARQIVGVIQAMGTFVEGLFVATAVPMEMNRNQRV---EASIVVGTPGTVQDLIKKRLFNTQHLRVLVLDEADNMLDQQGLGDQ 257
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: DBP2_NEUCR (ATP-dependent RNA helicase dbp-2 OS=Neurospora crassa GN=dbp-2 PE=3 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 5.447e-20 Identity = 63/174 (36.21%), Postives = 90/174 (51.72%), Query Frame = 3 Query: 165 ITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVC--QTVDTSSREVQA-------LILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQI 659 + +FD G ++ + GF P+AIQ + + GRDV+ A++G+GKT LT C V +++ + A LIL+PTRELA Q ++ + G I+ GG G IR L GV V TPGR+ DM++ R + LVLDE+D ML GF+ QI Sbjct: 131 VETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRDVVGIAETGSGKT----LTYCLPAIVHINAQPLLAPGDGPIVLILAPTRELAVQIQQEISKFGKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLESGKTNLRRVTYLVLDEADRMLDMGFEPQI 300
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: DBP2_MAGGR (ATP-dependent RNA helicase DBP2 OS=Magnaporthe grisea GN=DBP2 PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.447e-20 Identity = 64/185 (34.59%), Postives = 94/185 (50.81%), Query Frame = 3 Query: 132 MVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVC--QTVDTSSREVQA-------LILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQI 659 M + ++ + + +FD G ++ + GF P+AIQ + + GRDV+ A++G+GKT LT C V +++ + A LIL+PTRELA Q + + G I+ GG G IR L GV V TPGR+ DM++ R + LVLDE+D ML GF+ QI Sbjct: 113 MAVQGSDVPKPVETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRDVVGIAETGSGKT----LTYCLPAIVHINAQPLLAPGDGPIVLILAPTRELAVQIQAEISKFGKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLESGKTNLRRVTYLVLDEADRMLDMGFEPQI 293
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: DBP2_ENCCU (ATP-dependent RNA helicase DBP2 OS=Encephalitozoon cuniculi GN=DBP2 PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.447e-20 Identity = 61/182 (33.52%), Postives = 92/182 (50.55%), Query Frame = 3 Query: 129 KMVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKT-SMIALTVCQTVDTSSREVQ----ALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQI 659 +M+ + T I F+ G +++ + + GF +P+AIQ + + GRD++ AQ+G+GKT S I + D L+L+PTREL Q +KVV N+++ A GG S IR L G VV TPGR+ D+ + + LVLDE+D ML GF+ Q+ Sbjct: 74 EMIVKGTNVPHPIQKFEEAGFSSEVVSSLVEKGFSEPTAIQGQGWPMALSGRDMVGIAQTGSGKTLSFILPALVHAKDQQPLRRGDGPIVLVLAPTRELVMQIKKVVDEFCGMFNLRSTAVYGGASSQPQIRALHEGAEVVIATPGRLIDLHDQGHAPLSRVTFLVLDEADRMLDMGFEPQL 255 The following BLAST results are available for this feature:
BLAST of FC868508 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868508 ID=FC868508; Name=FC868508; organism=Citrus clementina; type=EST; length=677bpback to top |