FC868508
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: IF4A_MAGGR (ATP-dependent RNA helicase eIF4A OS=Magnaporthe grisea GN=TIF1 PE=3 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 5.384e-60 Identity = 109/172 (63.37%), Postives = 143/172 (83.14%), Query Frame = 3 Query: 159 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYR 674 E + SFD M +K +LLRGIY YGFE+PSAIQQRA+MP+IKG DVIAQAQSGTGKT+ +++V Q +DT+ ++ QALIL+PTRELA Q +KVV+AIGDF+NI+ HAC+GG SV +D++ L+ G VV GTPGRV DMI+R+ L+T +K+ VLDE+DEMLSRGF +QIYD+++ Sbjct: 20 ETVDSFDEMNLKSELLRGIYAYGFERPSAIQQRAIMPVIKGHDVIAQAQSGTGKTATFSISVLQKIDTNVKQCQALILAPTRELAQQIQKVVVAIGDFMNIECHACIGGTSVRDDMKALQDGPQVVVGTPGRVHDMIQRRFLKTDGMKMFVLDEADEMLSRGFTEQIYDIFQ 191
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: IF4A_YARLI (ATP-dependent RNA helicase eIF4A OS=Yarrowia lipolytica GN=TIF1 PE=3 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 1.566e-59 Identity = 106/176 (60.23%), Postives = 142/176 (80.68%), Query Frame = 3 Query: 144 TTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVY 671 TT E +TSFD +G+KD+LLRGIY YGFE PS+IQQRA++P+IKG DV+AQAQSGTGKT+ +++ Q +D ++ QALI++PTRELA Q +KVVLA G+++ I+ HAC+GG SV EDIR ++ GVHV+ GTPGR+ DMI+R+ L+T IK+ +LDE+DEMLSR FKD IYD++ Sbjct: 14 TTNYDEVVTSFDDLGLKDELLRGIYGYGFENPSSIQQRAILPVIKGNDVLAQAQSGTGKTATFSISALQNIDEKIKKPQALIIAPTRELAHQIQKVVLAFGEYMKIECHACIGGTSVAEDIRVIQEGVHVIVGTPGRIHDMIERRILKTDLIKMFILDEADEMLSREFKDPIYDIF 189
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: IF4A_NEUCR (ATP-dependent RNA helicase eIF4A OS=Neurospora crassa GN=tif-1 PE=3 SV=2) HSP 1 Score: 228.409 bits (581), Expect = 2.672e-59 Identity = 109/172 (63.37%), Postives = 142/172 (82.56%), Query Frame = 3 Query: 159 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYR 674 E + SFD M +K +LLRGIY YGFE+PSAIQQRA+MP+IKG DVIAQAQSGTGKT+ +++V Q +D S + QALIL+PTRELA Q +KVV+AIGDF+NI+ HAC+GG SV +D++ L+ G VV GTPGRV DMI+R+ L+T ++K+ VLDE+DEMLSRGF +QIYD+++ Sbjct: 21 ETVDSFDEMNLKPELLRGIYAYGFERPSAIQQRAIMPVIKGHDVIAQAQSGTGKTATFSISVLQKIDPSLKACQALILAPTRELAQQIQKVVVAIGDFMNIECHACIGGTSVRDDMKALQDGPQVVVGTPGRVHDMIQRRFLKTDSMKMFVLDEADEMLSRGFTEQIYDIFQ 192
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: FAL1_DEBHA (ATP-dependent RNA helicase FAL1 OS=Debaryomyces hansenii GN=FAL1 PE=3 SV=1) HSP 1 Score: 228.024 bits (580), Expect = 3.490e-59 Identity = 103/179 (57.54%), Postives = 144/179 (80.45%), Query Frame = 3 Query: 141 ETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRY 677 ++T+ ++ +F++M +K DLL+GIY YGFE PSAIQ RA+M II G+D IAQAQSGTGKT+ ++ + + +DT S++ QALILSPTRELA Q + VV +GD++N+ HAC+GG VGEDI+KL+ G +VSGTPGRV DMIKR+ L TR IK+++LDE+DE++++GFK+QIY++YRY Sbjct: 17 KSTKNIKVHATFESMNLKTDLLKGIYGYGFEAPSAIQSRAIMQIISGKDTIAQAQSGTGKTATFSIGMLEVIDTKSKDCQALILSPTRELAQQIQSVVKHLGDYMNVHTHACIGGTHVGEDIKKLQQGQQIVSGTPGRVVDMIKRRNLATRNIKMMILDEADELMTKGFKEQIYEIYRY 195
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: IF4A_SCLS1 (ATP-dependent RNA helicase eIF4A OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=tif1 PE=3 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 5.953e-59 Identity = 106/172 (61.63%), Postives = 143/172 (83.14%), Query Frame = 3 Query: 159 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYR 674 E + SFD M +K +LLRG+Y YGFE+PSAIQQRA+MP+IKG DVIAQAQSGTGKT+ +++V Q +D + ++ QALIL+PTRELA Q +KVV+AIGDF+N++ HAC+GG SV +D++ L+ G VV GTPGRV DMI+R+ L+T ++K+ VLDE+DEMLSRGF +QIYD+++ Sbjct: 22 ETVDSFDTMNLKPELLRGVYAYGFERPSAIQQRAIMPVIKGHDVIAQAQSGTGKTATFSISVLQKLDPNVKQCQALILAPTRELAQQIQKVVVAIGDFMNVECHACIGGTSVRDDMKALQDGPQVVVGTPGRVHDMIQRRFLKTDSMKMFVLDEADEMLSRGFTEQIYDIFQ 193
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: IF4A_SCHPO (ATP-dependent RNA helicase eIF4A OS=Schizosaccharomyces pombe GN=tif1 PE=1 SV=2) HSP 1 Score: 227.254 bits (578), Expect = 5.953e-59 Identity = 108/172 (62.79%), Postives = 142/172 (82.56%), Query Frame = 3 Query: 159 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYR 674 E I +FD M +K +LLRGIY YGFE+PSAIQQRA+MPI+ RDV+AQAQSGTGKT+ +++V Q +DTS ++ QALIL+PTRELA Q +KVV+A+GD +N++ HAC+GG V +D+ L+ GVHVV GTPGRV DMI+R+ L T A+++ VLDE+DEMLSRGFKDQIYD+++ Sbjct: 16 EVIDTFDDMNLKPELLRGIYAYGFERPSAIQQRAIMPILGERDVLAQAQSGTGKTATFSISVLQKIDTSLKQCQALILAPTRELAQQIQKVVVALGDLMNVECHACIGGTLVRDDMAALQAGVHVVVGTPGRVHDMIQRRALPTDAVQMFVLDEADEMLSRGFKDQIYDIFQ 187
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: IF4A_CHAGB (ATP-dependent RNA helicase eIF4A OS=Chaetomium globosum GN=TIF1 PE=3 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 5.953e-59 Identity = 107/172 (62.21%), Postives = 141/172 (81.98%), Query Frame = 3 Query: 159 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYR 674 E + SFD M +K +LLRGIY YGFE+PSAIQQRA+MP+IKG DVIAQAQSGTGKT+ +++V Q +D + + QALIL+PTRELA Q +KVV+AIGDF+NI+ HAC+GG SV +D++ L+ G V+ GTPGRV DMI+R+ L+T +K+ VLDE+DEMLSRGF +QIYD+++ Sbjct: 21 ETVDSFDDMNLKSELLRGIYAYGFERPSAIQQRAIMPVIKGHDVIAQAQSGTGKTATFSISVLQKIDPTVKSCQALILAPTRELAQQIQKVVIAIGDFMNIECHACIGGTSVRDDMKALQDGPQVIVGTPGRVHDMIQRRILKTDQMKMFVLDEADEMLSRGFTEQIYDIFQ 192
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: IF4A_BOTFB (ATP-dependent RNA helicase eIF4A OS=Botryotinia fuckeliana (strain B05.10) GN=tif1 PE=3 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 5.953e-59 Identity = 106/172 (61.63%), Postives = 143/172 (83.14%), Query Frame = 3 Query: 159 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYR 674 E + SFD M +K +LLRG+Y YGFE+PSAIQQRA+MP+IKG DVIAQAQSGTGKT+ +++V Q +D + ++ QALIL+PTRELA Q +KVV+AIGDF+N++ HAC+GG SV +D++ L+ G VV GTPGRV DMI+R+ L+T ++K+ VLDE+DEMLSRGF +QIYD+++ Sbjct: 22 ETVDSFDTMNLKPELLRGVYAYGFERPSAIQQRAIMPVIKGHDVIAQAQSGTGKTATFSISVLQKLDPNVKQCQALILAPTRELAQQIQKVVVAIGDFMNVECHACIGGTSVRDDMKALQDGPQVVVGTPGRVHDMIQRRFLKTDSMKMFVLDEADEMLSRGFTEQIYDIFQ 193
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: FAL1_PICST (ATP-dependent RNA helicase FAL1 OS=Pichia stipitis GN=FAL1 PE=3 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 5.953e-59 Identity = 105/179 (58.66%), Postives = 144/179 (80.45%), Query Frame = 3 Query: 141 ETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRY 677 ++T+ V+ +F++M +K DLL+GIY YGFE PSAIQ RA+M II GRD IAQAQSGTGKT+ ++ + Q +DT++++ QALILSPTRELA Q + VV +GD++NI HAC+GG VG+DI+KL+ G +VSGTPGRV DM+KR+ L TR IK+L+LDE+DE+ ++GFK+QIY+VY+Y Sbjct: 17 KSTKNVKVHATFESMNLKPDLLKGIYGYGFEAPSAIQSRAIMQIINGRDTIAQAQSGTGKTATFSIGMLQAIDTNAKDCQALILSPTRELAVQIQNVVKHLGDYMNIHTHACIGGTHVGDDIKKLKQGQQIVSGTPGRVVDMVKRQQLSTRNIKMLILDEADELFTKGFKEQIYEVYKY 195
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: FAL1_PICGU (ATP-dependent RNA helicase FAL1 OS=Pichia guilliermondii GN=FAL1 PE=3 SV=2) HSP 1 Score: 227.254 bits (578), Expect = 5.953e-59 Identity = 100/178 (56.18%), Postives = 146/178 (82.02%), Query Frame = 3 Query: 141 ETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYR 674 ++T+ V+ +F++M +K +LL+GIY YGFE PSAIQ RA+M II+GRD IAQAQSGTGKT+ ++ + ++DT S++ QAL+LSPTRELA Q E V+ +GD++N+++HAC+GG VGED++KL+ G H++SGTPGRV DMIKR+ + R +K+LVLDE+DE+L++GFK+QIY++Y+ Sbjct: 15 KSTKKVKIYPTFESMNLKPELLKGIYNYGFEAPSAIQSRAIMQIIRGRDTIAQAQSGTGKTATFSIGILSSIDTKSKDCQALVLSPTRELAQQIENVIEHLGDYMNVRSHACIGGTQVGEDVKKLQQGQHIISGTPGRVLDMIKRRNIMPRHVKMLVLDEADELLTKGFKEQIYEIYK 192 The following BLAST results are available for this feature:
BLAST of FC868508 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC868508 ID=FC868508; Name=FC868508; organism=Citrus clementina; type=EST; length=677bpback to top |