FC868508
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: DRS1_DEBHA (ATP-dependent RNA helicase DRS1 OS=Debaryomyces hansenii GN=DRS1 PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.070e-19 Identity = 54/180 (30.00%), Postives = 102/180 (56.67%), Query Frame = 3 Query: 144 TTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTV---DTSSREVQALILSPTRELATQTEKVVLAIGDFI-NIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRK-TLRTRAIKLLVLDESDEMLSRGFKDQIYDV 668 TT + T+F ++ + +L+G+ Q G+ KPS IQ + + G+D++A A +G+GKT+ + + + + + ++L+PTRELA Q V IG F+ N+ VGG ++ + ++L+ +V TPGR+ D I+ + ++++LV+DE+D ML GF+ ++ ++ Sbjct: 250 TTAKKQLHTTFQSLQLSRPVLKGLSQLGYTKPSPIQSACIPIALLGKDIVAGAVTGSGKTAAYMIPIIERLLYKPAKISSTRVIVLAPTRELAIQVCDVGKKIGQFVNNLNFGLAVGGLNLRQQEQQLKTRPDIVIATPGRLIDHIRNSPSFSIDSLEVLVIDEADRMLDEGFQAELTEI 429
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: DED1_VANPO (ATP-dependent RNA helicase DED1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=DED1 PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.070e-19 Identity = 64/189 (33.86%), Postives = 96/189 (50.79%), Query Frame = 3 Query: 147 TEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQT--------VDTSSREV-------QALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDV 668 T+ EAIT F + + LL I F KP+ +Q+ +V + +GRD++A AQ+G+GKT V + S+R+ AL+L+PTRELATQ ++ GG +G IR L G ++ TPGR+ D+++R + +K LVLDE+D ML GF+ QI + Sbjct: 153 TDVPEAITEFTSPPLDALLLENIILARFTKPTPVQKYSVPIVSRGRDLMACAQTGSGKTGGFLFPVLSESFKNGPSPMPESARKSFVKKAYPTALVLAPTRELATQIYDEAKKFTYRSWVRPTVVYGGSDIGSQIRDLSRGCDLLVATPGRLSDLLERGRVSLANVKYLVLDEADRMLDMGFEPQIRQI 341
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: DBP2_SCLS1 (ATP-dependent RNA helicase dbp2 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=dbp2 PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.070e-19 Identity = 62/174 (35.63%), Postives = 89/174 (51.15%), Query Frame = 3 Query: 165 ITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVC--QTVDTSSREVQA-------LILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQI 659 + +FD G ++ + GF P+ IQ + + GRDV+ A++G+GKT LT C V +++ + A L+L+PTRELA Q ++ + G I+ GG G IR L GV V TPGR+ DMI+ R + LVLDE+D ML GF+ QI Sbjct: 148 VETFDEAGFPAYVMTEVKAQGFPAPTPIQSQGWPMALSGRDVVGIAETGSGKT----LTYCLPAIVHINAQPLLAPGDGPIVLVLAPTRELAVQIQQEITKFGKSSRIRNTCVYGGVPKGGQIRDLAKGVEVCIATPGRLIDMIESGKTNLRRVTYLVLDEADRMLDMGFEPQI 317
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: DBP2_CHAGB (ATP-dependent RNA helicase DBP2 OS=Chaetomium globosum GN=DBP2 PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.070e-19 Identity = 61/174 (35.06%), Postives = 89/174 (51.15%), Query Frame = 3 Query: 165 ITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVC--QTVDTSSREVQA-------LILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQI 659 + +FD G ++ + GF P+AIQ + + GRDV+ A++G+GKT LT C V +++ + A L+L+PTRELA Q ++ + G I+ GG G R L GV V TPGR+ DM++ R + LVLDE+D ML GF+ QI Sbjct: 135 VETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRDVVGIAETGSGKT----LTYCLPAIVHINAQPLLAPGDGPIVLVLAPTRELAVQIQQEITKFGKSSRIRNTCVYGGVPKGPQTRDLSRGVEVCIATPGRLIDMLESGRTNLRRVTYLVLDEADRMLDMGFEPQI 304
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: DBP2_BOTFB (ATP-dependent RNA helicase dbp2 OS=Botryotinia fuckeliana (strain B05.10) GN=dbp2 PE=3 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 2.070e-19 Identity = 62/174 (35.63%), Postives = 89/174 (51.15%), Query Frame = 3 Query: 165 ITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVC--QTVDTSSREVQA-------LILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQI 659 + +FD G ++ + GF P+ IQ + + GRDV+ A++G+GKT LT C V +++ + A L+L+PTRELA Q ++ + G I+ GG G IR L GV V TPGR+ DMI+ R + LVLDE+D ML GF+ QI Sbjct: 101 VETFDEAGFPAYVMTEVKAQGFPAPTPIQSQGWPMALSGRDVVGIAETGSGKT----LTYCLPAIVHINAQPLLAPGDGPIVLVLAPTRELAVQIQQEITKFGKSSRIRNTCVYGGVPKGGQIRDLAKGVEVCIATPGRLIDMIESGKTNLRRVTYLVLDEADRMLDMGFEPQI 270
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: RHLB_VIBHB (ATP-dependent RNA helicase rhlB OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=rhlB PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.703e-19 Identity = 57/174 (32.76%), Postives = 93/174 (53.45%), Query Frame = 3 Query: 174 FDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKT-SMIALTVCQTVDTSSRE------VQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYR 674 F +G+K + G+ + GFE + IQ A+ ++ G+D+ QAQ+GTGKT + + T + T E +A+I++PTRELA Q + ++A GG+S + + KL+ GV ++ GT GR+ D K++ I+ +VLDE+D M GF I ++R Sbjct: 11 FADLGLKPQVTEGLEKKGFEYCTPIQALALPVLLTGQDIAGQAQTGTGKTLAFLTATFNHLLTTPEHEGRKPTQPRAIIMAPTRELAIQIFNDAAPLIASTGLKAALAYGGESYDKQLAKLQDGVDILIGTTGRIIDFYKQRVFNLNNIQAVVLDEADRMFDLGFIKDIRFLFR 184
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: RH5_ORYSJ (DEAD-box ATP-dependent RNA helicase 5 OS=Oryza sativa subsp. japonica GN=Os07g0301200 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.703e-19 Identity = 59/152 (38.82%), Postives = 79/152 (51.97%), Query Frame = 3 Query: 225 GFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQA-------LILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQI 659 GFE+PS IQ A ++ GRD I A +G+GKT + V E A L+LSPTRELA Q V+ G I + GG S G I L+ GV +V GTPGR+ D+I+ R + +VLDE+D ML GF+ ++ Sbjct: 111 GFERPSPIQAYAWPYLLDGRDFIGIAATGSGKTIAFGVPALMHVRRKMGEKSAKKGVPRVLVLSPTRELAQQIADVLCEAGAPCGISSVCLYGGTSKGPQISALKSGVDIVIGTPGRMKDLIEMGICRLNDVSFVVLDEADRMLDMGFEPEV 262
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: RH10_ARATH (DEAD-box ATP-dependent RNA helicase 10 OS=Arabidopsis thaliana GN=RH10 PE=2 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 2.703e-19 Identity = 58/183 (31.69%), Postives = 101/183 (55.19%), Query Frame = 3 Query: 159 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTV-----DTSSREVQ-------ALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCD-MIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDV 668 E + +F +G++++L++ + G++ PS IQ A+ ++G+DVI AQ+G+GKT A+ + Q + D+ ++ + A +LSPTRELA Q + A+G I+++ VGG + L HV+ TPGR+ D M K +++K LVLDE+D +L+ F+ + + Sbjct: 6 EVVKTFAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTGAFAIPILQALLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRCAVLVGGIDRMQQTIALGKRPHVIVATPGRLWDHMSDTKGFSLKSLKYLVLDEADRLLNEDFEKSLNQI 188
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: DRS1_PHANO (ATP-dependent RNA helicase DRS1 OS=Phaeosphaeria nodorum GN=DRS1 PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.703e-19 Identity = 57/177 (32.20%), Postives = 95/177 (53.67%), Query Frame = 3 Query: 150 EGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREV---QALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCD-MIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDV 668 +G ++I SF AM + + +G+ GF +P+ IQ +A+ ++G+DV+ A++G+GKT+ + + + + ++V + I PTRELA Q V + F +I GG S E L+ VV TPGR D M + +++LVLDE+D ML GF+ Q+ ++ Sbjct: 279 KGAKSIGSFHAMSLSRPIQKGLAAIGFTEPTPIQAKAIPIAMQGKDVVGGAETGSGKTAAFLIPILERLLYRPKKVPTTRVAIFMPTRELAVQCFNVATKLASFTDITFALLAGGFSSREQEVMLKTRPDVVIATPGRFIDHMHNTAAFQVEHLEILVLDEADRMLEEGFETQLNEI 455
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: DRS1_MAGGR (ATP-dependent RNA helicase DRS1 OS=Magnaporthe grisea GN=DRS1 PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.703e-19 Identity = 54/170 (31.76%), Postives = 93/170 (54.71%), Query Frame = 3 Query: 171 SFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREV---QALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRK-TLRTRAIKLLVLDESDEMLSRGFKDQIYDV 668 SF +M + +LRG+ GF KP+ IQ + + + G+DV+ A +G+GKT+ + + + + ++V + +IL+PTRELA Q V + +I+ VGG S+ +L V+ TPGR D ++ + +++LVLDE+D ML GF D++ ++ Sbjct: 256 SFQSMSLSRPILRGLTSVGFAKPTPIQSKTIPIALMGKDVVGGAVTGSGKTAAFVVPILERLLYRPKKVPTSRVVILAPTRELAIQCHAVATKLASHTDIKFCLAVGGLSLKVQESELRLRPDVIIATPGRFIDHMRNSASFAVDTVEILVLDEADRMLEDGFADELNEI 425 The following BLAST results are available for this feature:
BLAST of FC868508 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868508 ID=FC868508; Name=FC868508; organism=Citrus clementina; type=EST; length=677bpback to top |