FC868508
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: DRS1_CANAL (ATP-dependent RNA helicase DRS1 OS=Candida albicans GN=DRS1 PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.703e-19 Identity = 54/180 (30.00%), Postives = 101/180 (56.11%), Query Frame = 3 Query: 138 FETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQ-TVDTSSREVQALILSPTRELATQTEKVVLAIGDFI-NIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRK-TLRTRAIKLLVLDESDEMLSRGFKDQIYDV 668 +E + + TSF + + +L+GI + F KP+ IQ ++ + G+D++A AQ+G+GKT + + + + S + +IL+PTRELA Q + + + N+ VGG ++ + +L+ +V TPGR+ D I+ + + I++LV+DE+D ML GF+D++ ++ Sbjct: 120 YEESSPQQTHTSFQTLQLSRPVLKGIAELKFTKPTPIQSASIPIALLGKDIVAGAQTGSGKTGAYMIPIIERLLYKPSTSTKVIILTPTRELALQVYEFGKKLSHHVNNLNIGLAVGGLNLRQQEEQLKTRPDIVIATPGRLIDHIRNSPSFSVQDIQVLVIDEADRMLEEGFQDELTEI 299
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: DED1_ASHGO (ATP-dependent RNA helicase DED1 OS=Ashbya gossypii GN=DED1 PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.703e-19 Identity = 62/181 (34.25%), Postives = 96/181 (53.04%), Query Frame = 3 Query: 159 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTV---------CQTVDTSSREVQ-----ALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQI 659 + IT F + + + LL I F KP+ +Q+ +V + KGRD++A AQ+G+GKT V T D S ++ A++L+PTRELATQ ++ GG + + IR+LE G ++ TPGR+ D+++R + ++K LVLDE+D ML GF+ QI Sbjct: 143 DPITEFTSPPLDELLLENIKLARFTKPTPVQKYSVPIVAKGRDLMACAQTGSGKTGGFLFPVLSQSFSNGPASTPDESGYYMRKAYPTAVVLAPTRELATQIFDEAKKFTYRSWVKPCVVYGGADIRQQIRELERGCDLIVATPGRLNDLLERGKISLCSVKYLVLDEADRMLDMGFEPQI 323
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: DDX27_BOVIN (Probable ATP-dependent RNA helicase DDX27 OS=Bos taurus GN=DDX27 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.703e-19 Identity = 58/183 (31.69%), Postives = 93/183 (50.82%), Query Frame = 3 Query: 138 FETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSRE---VQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKR-KTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYR 674 FE + SF M + LL+ I GF++P+ IQ+ + + G+D+ A A +GTGKT+ AL V + + R+ + L+L PTREL Q V + F +I VGG V L ++ TPGR+ D + + +I++L+LDE+D ML F++Q+ ++ R Sbjct: 177 FEDASQYDENLSFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTKQLAQFCSITTCLAVGGLDVKSQEAALRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEIIR 359
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: DBP4_PICST (ATP-dependent RNA helicase DBP4 OS=Pichia stipitis GN=DBP4 PE=3 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 2.703e-19 Identity = 57/175 (32.57%), Postives = 99/175 (56.57%), Query Frame = 3 Query: 159 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTV----DTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKT-LRTRAIKLLVLDESDEMLSRGFKDQIYDV 668 ++I+ F + I + LRG+ + F + IQ++ + +KG D++ A++G+GKT + V +++ T + ALI+SPTRELA QT +V+ IG + A GGK V + ++ ++++ GTPGR+ + + T +++LVLDE+D L GFK QI ++ Sbjct: 44 KSISQFSDLPITQETLRGLNESSFMSLTDIQKKTIPIALKGEDLMGTARTGSGKTLAFLIPVVESLIRNKITEHDGLAALIVSPTRELAVQTFEVLTKIGKYNTFSAGLVTGGKDVQYEKERVSR-MNILVGTPGRISQHLNEAVGMETSNLQVLVLDEADRCLDMGFKKQIDNI 217
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: DBP3_LODEL (ATP-dependent RNA helicase DBP3 OS=Lodderomyces elongisporus GN=DBP3 PE=3 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 2.703e-19 Identity = 56/166 (33.73%), Postives = 95/166 (57.23%), Query Frame = 3 Query: 165 ITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTS-SREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQI 659 I SFD + ++ D+ + + F KP+ IQ + ++ G+DV+ A++G+GKT + + TS ++++ L +SPTRELA Q + + ++ A GG S + I+K+ +G +VV TPGR+ D+I + +I LVLDE+D ML +GF++ I Sbjct: 127 ILSFDQIKLQKDVSSKLTK--FPKPTPIQSVSWPFLLDGKDVVGVAETGSGKTFAFGVPAINNIITSKNKDLSVLCISPTRELALQIYDNLEDLTRGTDVSCVAIYGGVSKDDQIKKIRNGANVVVATPGRLVDLINDGAVDLSSINYLVLDEADRMLEKGFEEDI 290
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: SUB2_PHANO (ATP-dependent RNA helicase SUB2 OS=Phaeosphaeria nodorum GN=SUB2 PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.530e-19 Identity = 59/176 (33.52%), Postives = 92/176 (52.27%), Query Frame = 3 Query: 168 TSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSRE--VQALILSPTRELATQTEKVVLAIGDFI-NIQAHACVGGKSVGEDIRKLEH---GVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSR-GFKDQIYDVYR 674 T F +KD+L+R I GFE PS +QQ + I G DV+ QA+SG GKT++ L Q +D L++ TRELA Q F+ +++ GG V +DI L + H++ GTPGR+ +++ + LR +K VLDE D+ML + ++ + ++R Sbjct: 52 TGFRDFLLKDELVRAITDCGFEHPSEVQQVTIPQAILGNDVLCQAKSGLGKTAVFVLATLQQMDEKPEPGVASILVMCHTRELAYQIRNEYNRFAKFLPDVKVGVFYGGTPVAKDIELLSNKDTHPHIIVGTPGRINALVRDRHLRLANLKHFVLDECDKMLDQPDMRNDVQAIFR 227
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: SRMB_ECOLI (ATP-dependent RNA helicase srmB OS=Escherichia coli (strain K12) GN=srmB PE=1 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.530e-19 Identity = 55/169 (32.54%), Postives = 82/169 (48.52%), Query Frame = 3 Query: 165 ITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQA----LILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQI 659 +T+F + + + LL + GF +P+AIQ A+ P + GRDV+ A +GTGKT+ L Q + R+ LIL+PTRELA Q + ++ GG + +V T GR+ IK + RA++ L+LDE+D ML GF I Sbjct: 3 VTTFSELELDESLLEALQDKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAYLLPALQHLLDFPRKKSGPPRILILTPTRELAMQVSDHARELAKHTHLDIATITGGVAYMNHAEVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDI 171
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: RRP3_USTMA (ATP-dependent rRNA helicase RRP3 OS=Ustilago maydis GN=RRP3 PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.530e-19 Identity = 52/159 (32.70%), Postives = 87/159 (54.72%), Query Frame = 3 Query: 174 FDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKR-KTLRTRAIKLLVLDESDEMLSRGF 647 F +G+ ++ GF+ P+ IQ +A+ ++ RDVI AQ+G+GKT+ + + Q + + + A +L+PTRELA Q + V A+G I +++ VGG + L HV+ TPGR+ D ++ K R ++ LV+DE+D +L F Sbjct: 106 FSDLGVIPQIVEACTNMGFKHPTPIQVKAIPEALQARDVIGLAQTGSGKTAAFTIPILQALWDNPKPFFACVLAPTRELAYQISQQVEALGSTIGVRSATIVGGMDMMSQSIALSKRPHVIVATPGRLQDHLENTKGFSLRGLQYLVMDEADRLLDMDF 264
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: RRP3_PHANO (ATP-dependent rRNA helicase RRP3 OS=Phaeosphaeria nodorum GN=RRP3 PE=3 SV=2) HSP 1 Score: 95.1301 bits (235), Expect = 3.530e-19 Identity = 50/169 (29.59%), Postives = 92/169 (54.44%), Query Frame = 3 Query: 171 SFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKR-KTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYR 674 +F +G++++L G++ + IQ ++ + G+D+I A++G+GKT+ L + Q + + LI++PTRELA Q + V A+G IN++ VGG + L H++ +PGR+ D ++ K + +K LVLDE+D +L F D + +++ Sbjct: 116 TFADLGVREELCDACENLGYKTATPIQTESIPLALAGKDIIGLAETGSGKTAAFVLPILQALLDKPQAYFGLIMAPTRELAYQISQQVDALGSIINVKCATLVGGMDMVPQAIALSKRPHIIVASPGRLLDHLENTKGFSLKHLKYLVLDEADRLLDLDFGDSLDKIFK 284
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: RHLB_VIBVY (ATP-dependent RNA helicase rhlB OS=Vibrio vulnificus (strain YJ016) GN=rhlB PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.530e-19 Identity = 58/174 (33.33%), Postives = 94/174 (54.02%), Query Frame = 3 Query: 174 FDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKT-SMIALTVCQTVDTSSRE------VQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYR 674 F +G+ ++ G+ + GFE + IQ A+ ++ G+D+ QAQ+GTGKT + + T + T + E +A+I++PTRELA Q + I+A GG+S + + KL+ GV V+ GT GR+ D K++ I+ +VLDE+D M GF I ++R Sbjct: 11 FADLGLNPQVVEGLEKKGFEFCTPIQALALPVLLSGQDIAGQAQTGTGKTLAFLTATFNHLLTTHAHEGRQPTQPRAIIMAPTRELAIQIYNDAEPLIASTGIKAALAYGGESYDKQLAKLQGGVDVLIGTTGRIIDFYKQRVFNLNNIQAVVLDEADRMFDLGFIKDIRFLFR 184 The following BLAST results are available for this feature:
BLAST of FC868508 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868508 ID=FC868508; Name=FC868508; organism=Citrus clementina; type=EST; length=677bpback to top |