FC868508
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: PRP5_NEOFI (Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=prp5 PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.611e-19 Identity = 56/177 (31.64%), Postives = 95/177 (53.67%), Query Frame = 3 Query: 165 ITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQ------ALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRT---RAIKLLVLDESDEMLSRGFKDQIYDV 668 + + G+ L I++ G+E P++IQ +A+ I+ GRDVI A++G+GKT + + + + R ++ LI++PTRELATQ K +N++A GG + + I +L+ G +V TPGR+ D++ R R + +VLDE+D M GF+ Q+ + Sbjct: 556 VMKWSQCGLGVQTLDVIHRLGYENPTSIQSQAIPAIMSGRDVIGVAKTGSGKTIAFLIPMFRHI-RDQRPLENMEGPIGLIMTPTRELATQIHKDCKPFLKALNLRAVCAYGGAPIKDQIAELKRGAEIVVCTPGRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKI 731
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: PRP5_COCIM (Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Coccidioides immitis GN=PRP5 PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.611e-19 Identity = 56/177 (31.64%), Postives = 96/177 (54.24%), Query Frame = 3 Query: 165 ITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQ------ALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRT---RAIKLLVLDESDEMLSRGFKDQIYDV 668 + + G+ L I + G+E+P++IQ +A+ I+ GRDVI A++G+GKT L + + + R ++ LI++PTRELATQ K +N++A GG + + I +L+ G ++ TPGR+ D++ + R R + +VLDE+D M GF+ Q+ + Sbjct: 558 VQKWSQCGLGVQTLDVIRKLGYEQPTSIQSQAIPAIMSGRDVIGVAKTGSGKTIAFLLPMFRHIK-DQRPLENMEGPVGLIMTPTRELATQIHKECKPFLKALNLRAVCAYGGAPIKDQIAELKRGAEIIVCTPGRMIDLLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKI 733
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: MAK5_EMENI (ATP-dependent RNA helicase mak5 OS=Emericella nidulans GN=mak5 PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.611e-19 Identity = 60/186 (32.26%), Postives = 102/186 (54.84%), Query Frame = 3 Query: 165 ITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQ---------TVDTSSREVQ---ALILSPTRELATQTEKVVLAI---GDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKR---KTLRTRAIKLLVLDESDEMLSRGFKDQIYDV 668 I++++ +G+ + L + + F P+++Q+ + PI+ G DVI +A +G+GKT L + + T+D+ + + ALILSPTRELA Q +K + + +N + GG SV + R LE +V GTPGRV ++++ R + IK LV+DE+D +LS G ++ D+ Sbjct: 196 ISAWEPLGLSPETLTSLSKLKFSTPTSVQKSCIPPILDGHDVIGKASTGSGKTLAFGLPILEHYLERERRKTIDSEEEKEKIPIALILSPTRELAHQLQKHIYGLISNAPGVNARTALLTGGLSVQKQQRLLE-TADIVIGTPGRVWEVLRTGQGLIRRMQGIKFLVIDEADRLLSEGHFKEVEDI 380
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: DDX3Y_PONAB (ATP-dependent RNA helicase DDX3Y OS=Pongo abelii GN=DDX3Y PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.611e-19 Identity = 62/184 (33.70%), Postives = 97/184 (52.72%), Query Frame = 3 Query: 165 ITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKG-RDVIAQAQSGTGKTSMIALTVCQTVDTSS---------------REVQ---ALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQI 659 I +F + + + ++ I + +P+ +Q+ A+ PIIKG RD++A AQ+G+GKT+ L + + T R Q +L+L+PTRELA Q + ++ GG +G+ IR LE G H++ TPGR+ DM++R + K LVLDE+D ML GF+ QI Sbjct: 177 IENFSDIDMGEIIMGNIELTRYTRPTPVQKHAI-PIIKGKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQI 359
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: DDX3Y_PANTR (ATP-dependent RNA helicase DDX3Y OS=Pan troglodytes GN=DDX3Y PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.611e-19 Identity = 62/184 (33.70%), Postives = 97/184 (52.72%), Query Frame = 3 Query: 165 ITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKG-RDVIAQAQSGTGKTSMIALTVCQTVDTSS---------------REVQ---ALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQI 659 I +F + + + ++ I + +P+ +Q+ A+ PIIKG RD++A AQ+G+GKT+ L + + T R Q +L+L+PTRELA Q + ++ GG +G+ IR LE G H++ TPGR+ DM++R + K LVLDE+D ML GF+ QI Sbjct: 177 IENFGDIDMGEIIMGNIQLTRYTRPTPVQKHAI-PIIKGKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQI 359
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: DDX3Y_HUMAN (ATP-dependent RNA helicase DDX3Y OS=Homo sapiens GN=DDX3Y PE=1 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 4.611e-19 Identity = 62/184 (33.70%), Postives = 97/184 (52.72%), Query Frame = 3 Query: 165 ITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKG-RDVIAQAQSGTGKTSMIALTVCQTVDTSS---------------REVQ---ALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQI 659 I +F + + + ++ I + +P+ +Q+ A+ PIIKG RD++A AQ+G+GKT+ L + + T R Q +L+L+PTRELA Q + ++ GG +G+ IR LE G H++ TPGR+ DM++R + K LVLDE+D ML GF+ QI Sbjct: 177 IENFSDIDMGEIIMGNIELTRYTRPTPVQKHAI-PIIKGKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQI 359
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: DBP10_VANPO (ATP-dependent RNA helicase DBP10 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=DBP10 PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.611e-19 Identity = 47/168 (27.98%), Postives = 96/168 (57.14%), Query Frame = 3 Query: 171 SFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREV--QALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDV 668 SF + G +L +++ GF +P+ IQ++ + I++ RD++ A++G+GKT+ L + + + + S ++ +A+ILSP+RELA QT +V ++++ GG S+ + + V+ TPGR + +L + ++ +V DE+D + GF++Q+ ++ Sbjct: 122 SFPSFGFSKLILSNVHKKGFRQPTPIQRKTIPLILQKRDIVGMARTGSGKTAAFVLPMIEKLKSHSSKIGARAVILSPSRELALQTHRVFKEFSKGTHLRSVLLTGGDSLEDQFSMMMSNPDVIVATPGRFLHLKVEMSLDLKTVEYVVFDEADRLFEMGFQEQLNEL 289
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: DBP10_PICST (ATP-dependent RNA helicase DBP10 OS=Pichia stipitis GN=DBP10 PE=3 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 4.611e-19 Identity = 52/168 (30.95%), Postives = 92/168 (54.76%), Query Frame = 3 Query: 171 SFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREV--QALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDV 668 SF + G+ +L I + G+ +P+ IQ++ + I+ RDV+ A++G+GKT+ L V + + S V +A+ILSP+RELA QT K V +++A GG S+ + + +V TPGR + L + ++ +V DE+D + +GF +Q+ ++ Sbjct: 100 SFQSFGLSKLVLTNIAKKGYRQPTPIQRKTIPLIMANRDVVGMARTGSGKTAAFTLPVIEKLKGHSARVGIRAIILSPSRELALQTYKQVKEFSKGSDLRAIVLTGGDSLEDQFSSMVSNPDIVIATPGRFLHLQVEMQLDLKTVEYIVFDEADHLFEQGFAEQLNEL 267
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: SUB2_ASPNC (ATP-dependent RNA helicase sub2 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=sub2 PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.022e-19 Identity = 57/174 (32.76%), Postives = 93/174 (53.45%), Query Frame = 3 Query: 168 TSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFI-NIQAHACVGGKSVGEDIRKL---EHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSR-GFKDQIYDVYR 674 T F +K++LLR I GFE PS +QQ + I DV+ QA+SG GKT++ LT ++ E L++ TRELA Q + ++ +++ GG + +D+ L E ++V GTPGR+ +++ K L R +K VLDE D+ML + + + +++R Sbjct: 57 TGFRDFLLKEELLRAITDCGFEHPSEVQQVCIPTAILNVDVLCQAKSGLGKTAVFVLTTLHQLEPVPGECSILVMCHTRELAYQIKNEYARFSKYLPDVKTAVFYGGTPIQKDVELLSNKESYPNIVVGTPGRLNALVRDKKLSLRNVKAFVLDECDKMLDQIDMRRDVQEIFR 230
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: RH52_ARATH (DEAD-box ATP-dependent RNA helicase 52 OS=Arabidopsis thaliana GN=RH52 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.022e-19 Identity = 56/175 (32.00%), Postives = 93/175 (53.14%), Query Frame = 3 Query: 165 ITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSS-----REVQ-----ALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQI 659 + +F + + + L I + + KP+ +Q+ A+ + GRD++A AQ+G+GKT+ + + R V+ A+ILSPTRELA Q ++ GG V + IR+LE GV ++ TPGR+ D+++R + + ++ L LDE+D ML GF+ QI Sbjct: 145 VNTFAEIDLGEALNLNIQRCKYVKPTPVQRNAIPILAAGRDLMACAQTGSGKTAAFCFPIISGIMKDQHIERPRGVRGVYPLAVILSPTRELACQIHDEARKFSYQTGVKVVVAYGGTPVNQQIRELERGVDILVATPGRLNDLLERGRVSLQMVRFLALDEADRMLDMGFEPQI 319 The following BLAST results are available for this feature:
BLAST of FC868508 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868508 ID=FC868508; Name=FC868508; organism=Citrus clementina; type=EST; length=677bpback to top |