FC868508
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: IF4A_COCIM (ATP-dependent RNA helicase eIF4A OS=Coccidioides immitis GN=TIF1 PE=3 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 2.262e-58 Identity = 107/173 (61.85%), Postives = 141/173 (81.50%), Query Frame = 3 Query: 159 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRY 677 E SFDAM ++ +LLRG+Y YGFE+PSAIQQRA+MP+IKG DVIAQAQSGTGKT+ +++ Q VDT+ + QALIL+PTRELA Q +KVV+AIGDF++++ HAC+GG +V EDI+ L G VV GTPGRV DMI+R+ L+T +K+ VLDE+DEMLSRGF +QIYD++++ Sbjct: 22 EITDSFDAMNLRAELLRGVYAYGFERPSAIQQRAIMPVIKGSDVIAQAQSGTGKTATFSISALQKVDTNLKACQALILAPTRELAQQIQKVVVAIGDFMSVECHACIGGTNVREDIKALNDGPQVVVGTPGRVHDMIQRRVLKTDQMKMFVLDEADEMLSRGFTEQIYDIFQF 194
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: FAL1_LODEL (ATP-dependent RNA helicase FAL1 OS=Lodderomyces elongisporus GN=FAL1 PE=3 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 2.954e-58 Identity = 102/179 (56.98%), Postives = 147/179 (82.12%), Query Frame = 3 Query: 141 ETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRY 677 ++T+GV+ +F++M +K +LL+GIY YGFE PSAIQ RA+M II GRD IAQAQSGTGKT+ ++ + + +D+ S+E QAL+LSPTRELATQ + V+ +GD++NIQ +AC+GGK+VG DI++L+ G +VSGTPGRV D+IKR+ L TR IK+L+LDE+DE+ ++GFK+QIY++Y++ Sbjct: 17 KSTKGVKVHRTFESMRLKPELLKGIYAYGFEAPSAIQSRAIMQIISGRDTIAQAQSGTGKTATFSIGMLEVLDSKSKECQALVLSPTRELATQIQNVIKHLGDYMNIQTYACIGGKNVGTDIKRLQQGQQIVSGTPGRVLDVIKRRNLSTRHIKMLILDEADELFTKGFKEQIYEIYKH 195
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: IF4A_ASPFU (ATP-dependent RNA helicase eIF4A OS=Aspergillus fumigatus GN=tif1 PE=3 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 5.039e-58 Identity = 107/172 (62.21%), Postives = 140/172 (81.40%), Query Frame = 3 Query: 159 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYR 674 E SFDAM +K +LLRG+Y YGFE+PSAIQQRA++PIIKG DVIAQAQSGTGKT+ +++ Q +D + + QALIL+PTRELA Q +KVV+AIGDF+NI+ HAC+GG +V ED++ L+ G VV GTPGRV DMI+R+ LRT +K+ +LDE+DEMLSRGF +QIYD+++ Sbjct: 22 EITDSFDAMDLKPELLRGVYAYGFERPSAIQQRAILPIIKGNDVIAQAQSGTGKTATFSISALQKLDPNVKGCQALILAPTRELAQQIQKVVVAIGDFMNIECHACIGGTNVREDMKALQEGPQVVVGTPGRVQDMIQRRVLRTDNLKMFILDEADEMLSRGFTEQIYDIFQ 193
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: IF4A_AJECN (ATP-dependent RNA helicase eIF4A OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=TIF1 PE=3 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 8.596e-58 Identity = 107/173 (61.85%), Postives = 141/173 (81.50%), Query Frame = 3 Query: 159 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRY 677 E SFDAM ++ +LLRG+Y YGFE+PSAIQQRA+MP+IKG DVIAQAQSGTGKT+ +++ Q VDT+ + QALIL+PTRELA Q +KVV+AIGDF++I+ HAC+GG SV ED++ L+ G VV GTPGRV DMI+R+ L+T +K+ VLDE+DEMLS GF +QIYD++++ Sbjct: 22 EITDSFDAMNLRAELLRGVYAYGFERPSAIQQRAIMPVIKGSDVIAQAQSGTGKTATFSISALQKVDTNLKACQALILAPTRELAQQIQKVVVAIGDFMSIECHACIGGISVREDMKALQDGPQVVVGTPGRVHDMIQRRVLKTDHMKMFVLDEADEMLSHGFTEQIYDIFQF 194
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: IF4A_NEOFI (ATP-dependent RNA helicase eIF4A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=tif1 PE=3 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 1.123e-57 Identity = 107/172 (62.21%), Postives = 140/172 (81.40%), Query Frame = 3 Query: 159 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYR 674 E SFD+M +K +LLRGIY YGFE+PSAIQQRA++PIIKG DVIAQAQSGTGKT+ +++ Q +D + + QALIL+PTRELA Q +KVV+AIGDF+NI+ HAC+GG +V ED++ L+ G VV GTPGRV DMI+R+ LRT +K+ +LDE+DEMLSRGF +QIYD+++ Sbjct: 22 EITDSFDSMELKPELLRGIYAYGFERPSAIQQRAILPIIKGNDVIAQAQSGTGKTATFSISALQKLDPNVKGCQALILAPTRELAQQIQKVVVAIGDFMNIECHACIGGTNVREDMKALQEGPQVVVGTPGRVQDMIQRRVLRTDNLKMFILDEADEMLSRGFTEQIYDIFQ 193
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: IF4A_ASPCL (ATP-dependent RNA helicase eIF4A OS=Aspergillus clavatus GN=tif1 PE=3 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 1.123e-57 Identity = 107/172 (62.21%), Postives = 140/172 (81.40%), Query Frame = 3 Query: 159 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYR 674 E SFD+M +K +LLRGIY YGFE+PSAIQQRA+MPIIKG DVIAQAQSGTGKT+ +++ Q +D + + QALIL+PTRELA Q +KVV+AIGDF++++ HAC+GG +V ED++ L+ G VV GTPGRV DMI+R+ LRT +KL +LDE+DEMLSRGF +QIYD+++ Sbjct: 22 EITDSFDSMDLKPELLRGIYAYGFERPSAIQQRAIMPIIKGSDVIAQAQSGTGKTATFSISALQKIDPNLKACQALILAPTRELAQQIQKVVVAIGDFMSLECHACIGGTNVREDMKALQDGPQVVVGTPGRVQDMIQRRVLRTDQMKLFILDEADEMLSRGFTEQIYDIFQ 193
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: IF4A_PHANO (ATP-dependent RNA helicase eIF4A OS=Phaeosphaeria nodorum GN=TIF1 PE=3 SV=1) HSP 1 Score: 222.246 bits (565), Expect = 1.915e-57 Identity = 105/172 (61.05%), Postives = 140/172 (81.40%), Query Frame = 3 Query: 159 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYR 674 E SFDAM +K +LLRG+Y YGFE+PSAIQQRA+MP+IKG DVIAQAQSGTGKT+ +++ Q +D++ + QALIL+PTRELA Q +KVV+AIGDF+++ HAC+GG SV +D++ L+ G VV GTPGRV DMI+R+ L+T +K+ VLDE+DEMLSRGF +QIYD+++ Sbjct: 20 ETTDSFDAMNLKAELLRGVYAYGFERPSAIQQRAIMPVIKGHDVIAQAQSGTGKTATFSISTLQKIDSNVKACQALILAPTRELAQQIQKVVVAIGDFMDVACHACIGGTSVRDDMKALQDGPQVVVGTPGRVHDMIQRRVLKTDHMKMFVLDEADEMLSRGFTEQIYDIFQ 191
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: IF4A7_TOBAC (Eukaryotic initiation factor 4A-7 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 2.501e-57 Identity = 110/172 (63.95%), Postives = 136/172 (79.07%), Query Frame = 3 Query: 159 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYR 674 E SFDAMG++++LLRGIY YGFEKPSAIQQR ++P KG DVI QAQSGTGKT+ V Q +D S E QAL+L+PTRELA Q EKV+ A+GD++ ++ HACVGG SV ED R L+ GVHVV GTPGRV DM++R++LR IK+ VLDE+DEMLSRGFKDQIYD+++ Sbjct: 37 EVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYSLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGTPGRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIFQ 208
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: IF4A2_NICPL (Eukaryotic initiation factor 4A-2 OS=Nicotiana plumbaginifolia PE=2 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 2.501e-57 Identity = 110/172 (63.95%), Postives = 136/172 (79.07%), Query Frame = 3 Query: 159 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYR 674 E SFDAMG++++LLRGIY YGFEKPSAIQQR ++P KG DVI QAQSGTGKT+ V Q +D S E QAL+L+PTRELA Q EKV+ A+GD++ ++ HACVGG SV ED R L+ GVHVV GTPGRV DM++R++LR IK+ VLDE+DEMLSRGFKDQIYD+++ Sbjct: 37 EVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYSLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGTPGRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIFQ 208
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: IF414_TOBAC (Eukaryotic initiation factor 4A-14 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 2.501e-57 Identity = 110/172 (63.95%), Postives = 136/172 (79.07%), Query Frame = 3 Query: 159 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYR 674 E SFDAMG++++LLRGIY YGFEKPSAIQQR ++P KG DVI QAQSGTGKT+ V Q +D S E QAL+L+PTRELA Q EKV+ A+GD++ ++ HACVGG SV ED R L+ GVHVV GTPGRV DM++R++LR IK+ VLDE+DEMLSRGFKDQIYD+++ Sbjct: 37 EVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYSLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGTPGRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIFQ 208 The following BLAST results are available for this feature:
BLAST of FC868508 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868508 ID=FC868508; Name=FC868508; organism=Citrus clementina; type=EST; length=677bpback to top |