FC868508
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: IF413_TOBAC (Eukaryotic initiation factor 4A-13 (Fragment) OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 2.501e-57 Identity = 110/172 (63.95%), Postives = 136/172 (79.07%), Query Frame = 3 Query: 159 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYR 674 E SFDAMG++++LLRGIY YGFEKPSAIQQR ++P KG DVI QAQSGTGKT+ V Q +D S E QAL+L+PTRELA Q EKV+ A+GD++ ++ HACVGG SV ED R L+ GVHVV GTPGRV DM++R++LR IK+ VLDE+DEMLSRGFKDQIYD+++ Sbjct: 37 EVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYSLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGTPGRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIFQ 208
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: IF410_TOBAC (Eukaryotic initiation factor 4A-10 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 2.501e-57 Identity = 110/172 (63.95%), Postives = 136/172 (79.07%), Query Frame = 3 Query: 159 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYR 674 E SFDAMG++++LLRGIY YGFEKPSAIQQR ++P KG DVI QAQSGTGKT+ V Q +D S E QAL+L+PTRELA Q EKV+ A+GD++ ++ HACVGG SV ED R L+ GVHVV GTPGRV DM++R++LR IK+ VLDE+DEMLSRGFKDQIYD+++ Sbjct: 37 EVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYSLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGTPGRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIFQ 208
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: IF411_TOBAC (Eukaryotic initiation factor 4A-11 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 221.476 bits (563), Expect = 3.266e-57 Identity = 109/172 (63.37%), Postives = 136/172 (79.07%), Query Frame = 3 Query: 159 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYR 674 E SFDAMG++++LLRGIY YGFEKPSAIQQR ++P KG DVI QAQSGTGKT+ + Q +D S E QAL+L+PTRELA Q EKV+ A+GD++ ++ HACVGG SV ED R L+ GVHVV GTPGRV DM++R++LR IK+ VLDE+DEMLSRGFKDQIYD+++ Sbjct: 37 EVYESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYSLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGTPGRVFDMLRRQSLRPDNIKMFVLDEADEMLSRGFKDQIYDIFQ 208
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: IF4A_CRYNE (ATP-dependent RNA helicase eIF4A OS=Cryptococcus neoformans GN=TIF1 PE=3 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 5.571e-57 Identity = 101/172 (58.72%), Postives = 137/172 (79.65%), Query Frame = 3 Query: 159 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYR 674 E + +FD M +K +LLRGIY YGFE+PSAIQQRA+MPI+ GRD IAQAQSGTGKT+ ++++ Q +DT+ ++ QAL+L+PTRELA Q +KVV+A+GD++N+ HACVGG +V EDI +L G H+V GTPGRV DMI R L+T A+ + LDE+DEMLS GFK+ IY++++ Sbjct: 25 EVVDNFDDMKLKGELLRGIYAYGFERPSAIQQRAIMPIVTGRDCIAQAQSGTGKTATFSVSILQRIDTTVKKTQALVLAPTRELAQQIQKVVIALGDYLNVDCHACVGGTAVREDIARLNEGPHIVVGTPGRVFDMINRGALKTEAVMMFCLDEADEMLSTGFKESIYEIFQ 196
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: IF4A1_ARATH (Eukaryotic initiation factor 4A-1 OS=Arabidopsis thaliana GN=TIF4A-1 PE=1 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 5.571e-57 Identity = 109/168 (64.88%), Postives = 135/168 (80.36%), Query Frame = 3 Query: 171 SFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYR 674 SFDAMG++++LLRGIY YGFEKPSAIQQR ++P KG DVI QAQSGTGKT+ V Q +D S + QAL+L+PTRELA Q EKV+ A+GD++ ++ HACVGG SV ED R L+ GVHVV GTPGRV DM+KR++LR IK+ VLDE+DEMLSRGFKDQIYD+++ Sbjct: 40 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDFSLIQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQ 207
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: IF4A9_TOBAC (Eukaryotic initiation factor 4A-9 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 1.241e-56 Identity = 108/172 (62.79%), Postives = 134/172 (77.91%), Query Frame = 3 Query: 159 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYR 674 E SFDAMG+K++LLRGIY YGFEKPSAIQQR ++P KG DVI QAQSGTGKT+ + Q +D + QAL+L+PTRELA Q EKV+ A+GD++ ++ HACVGG SV ED R L GVHVV GTPGRV DM++R++LR IK+ VLDE+DEMLSRGFKDQIYD+++ Sbjct: 37 EVYHSFDAMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYELLDCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIFQ 208
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: IF4A3_ARATH (Eukaryotic initiation factor 4A-3 OS=Arabidopsis thaliana GN=TIF4A-3 PE=1 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 1.621e-56 Identity = 109/172 (63.37%), Postives = 135/172 (78.49%), Query Frame = 3 Query: 159 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYR 674 E SFDAM ++ DLLRGIY YGFEKPSAIQQR ++P KG DVI QAQSGTGKT+ V Q +D S + QAL+L+PTRELA Q EKV+ A+GD++ ++A ACVGG SV ED R L+ GVHVV GTPGRV D+++R++LR AIK+ VLDE+DEMLSRGFKDQIYD+++ Sbjct: 38 EVCDSFDAMELQPDLLRGIYAYGFEKPSAIQQRGIIPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDISLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKAQACVGGTSVREDQRVLQSGVHVVVGTPGRVFDLLRRQSLRADAIKMFVLDEADEMLSRGFKDQIYDIFQ 209
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: IF4A_EMENI (ATP-dependent RNA helicase eIF4A OS=Emericella nidulans GN=tif1 PE=3 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 2.765e-56 Identity = 101/172 (58.72%), Postives = 138/172 (80.23%), Query Frame = 3 Query: 159 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYR 674 E SFD+M +K +LLRG+Y YGFE+PSAIQQRA++PI+KG DVIAQAQSGTGKT+ +++ Q +D + + QALI++PTRELA Q +KVV+AIGDF+NIQ HAC+GG +V +D+ L G +V GTPGR+ DMI+R+ L+T +K+ +LDE+DEMLSRGF +QIYD+++ Sbjct: 45 EITDSFDSMELKPELLRGVYAYGFERPSAIQQRAILPIVKGNDVIAQAQSGTGKTATFSISALQKLDPNVKACQALIVAPTRELAQQIQKVVIAIGDFMNIQCHACIGGTAVRDDMNALREGPQIVVGTPGRIHDMIQRRVLKTDQMKMFILDEADEMLSRGFTEQIYDIFQ 216
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: IF4A_ASPTN (ATP-dependent RNA helicase eIF4A OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=tif1 PE=3 SV=2) HSP 1 Score: 218.394 bits (555), Expect = 2.765e-56 Identity = 101/168 (60.12%), Postives = 138/168 (82.14%), Query Frame = 3 Query: 171 SFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYR 674 SFD+M +K +LLRG+Y YGFE+PSAIQQRA+MPIIKG DVIAQAQSGTGKT+ +++ Q +D + + QALI++PTRELA Q +KVV+AIGDF+NI HAC+GG ++ +D++ L+ G +V GTPGR+ DMI+R+ L+T +KL +LDE+DEMLSRGF +QIYD+++ Sbjct: 24 SFDSMELKAELLRGVYAYGFERPSAIQQRAIMPIIKGNDVIAQAQSGTGKTATFSISALQKIDPNLKACQALIVAPTRELAQQIQKVVVAIGDFMNINCHACIGGTAIRDDMKALQEGPPIVVGTPGRIQDMIQRRVLKTDQMKLFILDEADEMLSRGFTEQIYDIFQ 191
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: IF4A_USTMA (ATP-dependent RNA helicase eIF4A OS=Ustilago maydis GN=TIF1 PE=3 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 3.611e-56 Identity = 102/170 (60.00%), Postives = 135/170 (79.41%), Query Frame = 3 Query: 165 ITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYR 674 I +FD M +K++LLRG+Y YGFE+PSAIQ RA++P+IKG DVIAQAQSGTGKT+ ++ + Q +D S + VQALIL+PTRELA Q +KVV+A+GD++ I HAC+GG +V ED+ KL G VV GTPGRV DMI R+ +T +K+ LDE+DEMLSRGFKDQ+Y+V++ Sbjct: 37 IDNFDNMELKEELLRGVYAYGFERPSAIQARAIVPVIKGHDVIAQAQSGTGKTATFSIAILQRIDPSIKAVQALILAPTRELAQQIQKVVIALGDYMKIDCHACIGGTNVREDMAKLNEGAQVVVGTPGRVYDMINRRAFKTDQLKMFCLDEADEMLSRGFKDQMYEVFQ 206 The following BLAST results are available for this feature:
BLAST of FC868508 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868508 ID=FC868508; Name=FC868508; organism=Citrus clementina; type=EST; length=677bpback to top |