FC868508
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: IF4A2_ARATH (Eukaryotic initiation factor 4A-2 OS=Arabidopsis thaliana GN=TIF4A-2 PE=1 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 4.717e-56 Identity = 108/172 (62.79%), Postives = 135/172 (78.49%), Query Frame = 3 Query: 159 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYR 674 E SFDAMG++++LLRGIY YGFEKPSAIQQR ++P KG DVI QAQSGTGKT+ V Q +D + + QAL+L+PTRELA Q EKV+ A+GD+ ++ HACVGG SV ED R L+ GVHVV GTPGRV DM++R++LR IK+ VLDE+DEMLSRGFKDQIYD+++ Sbjct: 36 EVHESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYALLQCQALVLAPTRELAQQIEKVMRALGDYQGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDCIKMFVLDEADEMLSRGFKDQIYDIFQ 207
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: IF4A_ASPOR (ATP-dependent RNA helicase eIF4A OS=Aspergillus oryzae GN=tif1 PE=3 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 8.045e-56 Identity = 106/172 (61.63%), Postives = 136/172 (79.07%), Query Frame = 3 Query: 159 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYR 674 E SFDAM +K +LLRG+Y YGFE+PSAIQQRA+ PIIKG DVIAQAQSGTGKT+ +++ Q +D + + QALIL+PTRELA Q +KVV+AIGDF+NI HAC+GG +V ED++ L G VV GTPGRV DMI+R+ L+T +K +LDE+DEMLSRGF +QIYD+++ Sbjct: 45 EITDSFDAMELKPELLRGVYAYGFERPSAIQQRAIKPIIKGSDVIAQAQSGTGKTATFSISALQKLDPNVKGCQALILAPTRELAQQIQKVVVAIGDFMNITCHACIGGTAVREDMKALGEGPEVVVGTPGRVHDMIQRRVLKTDHLKQFILDEADEMLSRGFTEQIYDIFQ 216
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: IF4A_MAIZE (Eukaryotic initiation factor 4A OS=Zea mays PE=2 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 1.051e-55 Identity = 106/168 (63.10%), Postives = 133/168 (79.17%), Query Frame = 3 Query: 171 SFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYR 674 SFD+MG++++LLRGIY YGFEKPSAIQQR ++P KG DVI QAQSGTGKT+ + Q +D E QAL+L+PTRELA Q EKV+ A+GD++ ++ HACVGG SV ED R L GVHVV GTPGRV DM++R++LR IK+ VLDE+DEMLSRGFKDQIYD+++ Sbjct: 38 SFDSMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILASGVHVVVGTPGRVFDMLRRQSLRPDNIKMFVLDEADEMLSRGFKDQIYDIFQ 205
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: IF4A1_ORYSJ (Eukaryotic initiation factor 4A-1 OS=Oryza sativa subsp. japonica GN=Os06g0701100 PE=2 SV=2) HSP 1 Score: 216.083 bits (549), Expect = 1.372e-55 Identity = 107/172 (62.21%), Postives = 134/172 (77.91%), Query Frame = 3 Query: 159 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYR 674 E SFD MG++++LLRGIY YGFEKPSAIQQR ++P KG DVI QAQSGTGKT+ + Q +D + E QAL+L+PTRELA Q EKV+ A+GD++ ++ HACVGG SV ED R L GVHVV GTPGRV DM++R++LR IK+ VLDE+DEMLSRGFKDQIYD+++ Sbjct: 38 EVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYAVVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILASGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQ 209
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: IF4A3_ORYSJ (Eukaryotic initiation factor 4A-3 OS=Oryza sativa subsp. japonica GN=Os02g0146600 PE=2 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 1.792e-55 Identity = 106/172 (61.63%), Postives = 133/172 (77.33%), Query Frame = 3 Query: 159 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYR 674 E SFD MG++++LLRGIY YGFEKPSAIQQR ++P KG DVI QAQSGTGKT+ + Q +D E Q+L+L+PTRELA Q EKV+ A+GD++ ++ HACVGG SV ED R L GVHVV GTPGRV DM++R++LR IK+ VLDE+DEMLSRGFKDQIYD+++ Sbjct: 38 EVFESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQSLVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILASGVHVVVGTPGRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIFQ 209
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: IF4A_ASPNC (ATP-dependent RNA helicase eIF4A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=tif1 PE=3 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 2.341e-55 Identity = 102/172 (59.30%), Postives = 135/172 (78.49%), Query Frame = 3 Query: 159 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYR 674 E SFD+M +K +LLRG+Y YGFE+PSAIQQRA+ PII G DVIAQAQSGTGKT+ +++ Q +D + QALI++PTRELA Q +KVV+AIGDF+NI+ HAC+GG +V +D+ L G VV GTPGR+ DMI+R+ L+T +KL +LDE+DEMLSRGF +QIYD+++ Sbjct: 22 EVTDSFDSMDLKPELLRGVYAYGFERPSAIQQRAIKPIIAGHDVIAQAQSGTGKTATFSISALQKIDQELKACQALIVAPTRELAQQIQKVVVAIGDFMNIECHACIGGTNVRDDMNALRAGPQVVVGTPGRIHDMIERRVLKTDQMKLFILDEADEMLSRGFTEQIYDIFQ 193
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: IF4A8_TOBAC (Eukaryotic initiation factor 4A-8 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 3.057e-55 Identity = 104/172 (60.47%), Postives = 134/172 (77.91%), Query Frame = 3 Query: 159 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYR 674 E SFDAMG++++LLRGIY YGFEKPSAIQQR ++P KG DVI QAQSGTGKT+ + Q +D + QAL+L+PTRELA Q EKV+ A+GD++ ++ HACVGG SV ED R L GVHV+ GTPGRV DM++R++LR +++ VLDE+DEMLSRGFKDQIYD+++ Sbjct: 37 EVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILAAGVHVIVGTPGRVFDMLRRQSLRPDYLRMFVLDEADEMLSRGFKDQIYDIFQ 208
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: IF4A_WHEAT (Eukaryotic initiation factor 4A OS=Triticum aestivum PE=2 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 3.993e-55 Identity = 106/172 (61.63%), Postives = 133/172 (77.33%), Query Frame = 3 Query: 159 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYR 674 E SFD MG++++LLRGIY YGFEKPSAIQQR ++P KG DVI QAQSGTGKT+ + Q +D E QAL+L+PTRELA Q EKV+ A+GD++ ++ HACVGG SV ED R L GVHVV GTPGRV D+++R++LR IK+ VLDE+DEMLSRGFKDQIYD+++ Sbjct: 38 EVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILASGVHVVVGTPGRVFDIVRRQSLRPDNIKMFVLDEADEMLSRGFKDQIYDIFQ 209
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: IF4A_CAEEL (Eukaryotic initiation factor 4A OS=Caenorhabditis elegans GN=inf-1 PE=2 SV=1) HSP 1 Score: 213.772 bits (543), Expect = 6.811e-55 Identity = 102/172 (59.30%), Postives = 135/172 (78.49%), Query Frame = 3 Query: 159 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYR 674 + + SFD M +K++LLRGIY +GFEKPSAIQ+RA++P G+DVIAQAQSGTGKT+ ++++ Q +D VQAL+++PTRELA Q +KV+ A+G+++N+ C+GG SV +D RKLE G+HVV GTPGRV DMI R L T IK+ VLDE+DEMLSRGFKDQIY+V+R Sbjct: 26 QVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRDDQRKLEAGIHVVVGTPGRVGDMINRNALDTSRIKMFVLDEADEMLSRGFKDQIYEVFR 197
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: FAL1_KLULA (ATP-dependent RNA helicase FAL1 OS=Kluyveromyces lactis GN=FAL1 PE=3 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 8.895e-55 Identity = 102/183 (55.74%), Postives = 141/183 (77.05%), Query Frame = 3 Query: 129 KMVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSR--GFKDQIYDVY 671 K+ F+T++ ++ +F++M +K DLLRGIY YGFE PS+IQ RA+ II G+DVIAQAQSGTGKT+ + + Q +D+ S+E+QAL+LSPTRELA+Q+E V+ +GD++N+ AHAC GGK++ +DI+K+ VVSGTPGRV DMIKR+ L R K+LVLDE+DE+L GFK QIYD++ Sbjct: 10 KLKFKTSKKLKVSATFESMNLKPDLLRGIYFYGFEYPSSIQSRAISQIISGKDVIAQAQSGTGKTATFTIGLLQAIDSKSKELQALVLSPTRELASQSESVISNLGDYLNVTAHACTGGKALQQDIKKVSKNCQVVSGTPGRVLDMIKRQVLNVRNCKILVLDEADELLGETLGFKQQIYDIF 192 The following BLAST results are available for this feature:
BLAST of FC868508 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868508 ID=FC868508; Name=FC868508; organism=Citrus clementina; type=EST; length=677bpback to top |