FC868508
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: IF4A1_MACFA (Eukaryotic initiation factor 4A-I OS=Macaca fascicularis GN=EIF4A1 PE=2 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 5.766e-54 Identity = 99/173 (57.23%), Postives = 134/173 (77.46%), Query Frame = 3 Query: 159 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLE-HGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYR 674 E + SFD M + + LLRGIY YGFEKPSAIQQRA++P IKG DVIAQAQSGTGKT+ A+++ Q ++ + QAL+L+PTRELA Q +KVV+A+GD++ HAC+GG +V +++KL+ H++ GTPGRV DM+ R+ L + IK+ VLDE+DEMLSRGFKDQIYD+++ Sbjct: 29 EIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQ 201
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: IF4A1_HUMAN (Eukaryotic initiation factor 4A-I OS=Homo sapiens GN=EIF4A1 PE=1 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 5.766e-54 Identity = 99/173 (57.23%), Postives = 134/173 (77.46%), Query Frame = 3 Query: 159 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLE-HGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYR 674 E + SFD M + + LLRGIY YGFEKPSAIQQRA++P IKG DVIAQAQSGTGKT+ A+++ Q ++ + QAL+L+PTRELA Q +KVV+A+GD++ HAC+GG +V +++KL+ H++ GTPGRV DM+ R+ L + IK+ VLDE+DEMLSRGFKDQIYD+++ Sbjct: 29 EIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQ 201
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: IF4A1_BOVIN (Eukaryotic initiation factor 4A-I OS=Bos taurus GN=EIF4A1 PE=2 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 5.766e-54 Identity = 99/173 (57.23%), Postives = 134/173 (77.46%), Query Frame = 3 Query: 159 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLE-HGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYR 674 E + SFD M + + LLRGIY YGFEKPSAIQQRA++P IKG DVIAQAQSGTGKT+ A+++ Q ++ + QAL+L+PTRELA Q +KVV+A+GD++ HAC+GG +V +++KL+ H++ GTPGRV DM+ R+ L + IK+ VLDE+DEMLSRGFKDQIYD+++ Sbjct: 29 EIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQ 201
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: FAL1_ASHGO (ATP-dependent RNA helicase FAL1 OS=Ashbya gossypii GN=FAL1 PE=3 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 2.861e-53 Identity = 100/183 (54.64%), Postives = 142/183 (77.60%), Query Frame = 3 Query: 129 KMVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSR--GFKDQIYDVY 671 K+ +T+ + +F++M ++++LLRGIY YGFE PSAIQ RA+ II+G+DVIAQAQSGTGKT+ + + Q +D+SS+++QAL+LSPTRELA Q +VV +GD++N+ A AC GGK++ +DI K+ G HV+SGTPGRV DMIKR+ + TR +K+LVLDE+DE+LS GFK Q+YD++ Sbjct: 10 KLKVKTSSKLPVSPTFESMKLQENLLRGIYGYGFEAPSAIQSRAITQIIRGKDVIAQAQSGTGKTATFTIGMLQVIDSSSKDLQALVLSPTRELAAQISQVVRNLGDYMNVVALACTGGKALQQDISKVNKGCHVMSGTPGRVLDMIKRRIINTRHVKMLVLDEADELLSETLGFKQQLYDIF 192
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: IF4A2_MACFA (Eukaryotic initiation factor 4A-II OS=Macaca fascicularis GN=EIF4A2 PE=2 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 3.737e-53 Identity = 99/173 (57.23%), Postives = 135/173 (78.03%), Query Frame = 3 Query: 159 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLE-HGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYR 674 E + +FD M +K+ LLRGIY YGFEKPSAIQQRA++P IKG DVIAQAQSGTGKT+ A+++ Q ++ +E QAL+L+PTRELA Q +KV+LA+GD++ HAC+GG +V +++KL+ H+V GTPGRV DM+ R+ L + IK+ VLDE+D MLSRGFKDQIY++++ Sbjct: 31 EIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADGMLSRGFKDQIYEIFQ 203
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: FAL1_YEAST (ATP-dependent RNA helicase FAL1 OS=Saccharomyces cerevisiae GN=FAL1 PE=1 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 8.325e-53 Identity = 100/184 (54.35%), Postives = 144/184 (78.26%), Query Frame = 3 Query: 129 KMVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLE-HGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSR--GFKDQIYDVY 671 K+ F+T++ ++ ++F++M +KDDLLRGIY YGFE PS+IQ RA+ II G+DVIAQAQSGTGKT+ + + Q +D +++QALILSPTRELA+Q +VV +GD++N+ A A GGK++ +D++K++ HG VSGTPGRV DMIK++ L+TR +++LVLDE+DE+LS GFK QIYD++ Sbjct: 10 KLKFKTSKKLKVSSTFESMNLKDDLLRGIYSYGFEAPSSIQSRAITQIISGKDVIAQAQSGTGKTATFTIGLLQAIDLRKKDLQALILSPTRELASQIGQVVKNLGDYMNVNAFAITGGKTLKDDLKKMQKHGCQAVSGTPGRVLDMIKKQMLQTRNVQMLVLDEADELLSETLGFKQQIYDIF 193
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: FAL1_YEAS7 (ATP-dependent RNA helicase FAL1 OS=Saccharomyces cerevisiae (strain YJM789) GN=FAL1 PE=3 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 8.325e-53 Identity = 100/184 (54.35%), Postives = 144/184 (78.26%), Query Frame = 3 Query: 129 KMVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLE-HGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSR--GFKDQIYDVY 671 K+ F+T++ ++ ++F++M +KDDLLRGIY YGFE PS+IQ RA+ II G+DVIAQAQSGTGKT+ + + Q +D +++QALILSPTRELA+Q +VV +GD++N+ A A GGK++ +D++K++ HG VSGTPGRV DMIK++ L+TR +++LVLDE+DE+LS GFK QIYD++ Sbjct: 10 KLKFKTSKKLKVSSTFESMNLKDDLLRGIYSYGFEAPSSIQSRAITQIISGKDVIAQAQSGTGKTATFTIGLLQAIDLRKKDLQALILSPTRELASQIGQVVKNLGDYMNVNAFAITGGKTLKDDLKKMQKHGCQAVSGTPGRVLDMIKKQMLQTRNVQMLVLDEADELLSETLGFKQQIYDIF 193
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: IF4A1_PONAB (Eukaryotic initiation factor 4A-I OS=Pongo abelii GN=EIF4A1 PE=2 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 2.422e-52 Identity = 97/173 (56.07%), Postives = 132/173 (76.30%), Query Frame = 3 Query: 159 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLE-HGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYR 674 E + S D M + + LLRGIY YGFEKPSAIQQRA++ IKG DVIAQAQSGTGKT+ A+++ Q ++ + QAL+L+PTRELA Q +KVV+A+GD++ HAC+GG +V +++KL+ H++ GTPGRV DM+ R+ L + IK+ VLDE+DEMLSRGFKDQIYD+++ Sbjct: 29 EIVDSLDDMNLSESLLRGIYAYGFEKPSAIQQRAILSCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQ 201
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: FAL1_PHANO (ATP-dependent RNA helicase FAL1 OS=Phaeosphaeria nodorum GN=FAL1 PE=3 SV=3) HSP 1 Score: 205.297 bits (521), Expect = 2.422e-52 Identity = 98/183 (53.55%), Postives = 134/183 (73.22%), Query Frame = 3 Query: 129 KMVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRY 677 KM F T++ V +F+AM +K++LLRGIY YG+E PSA+Q RA++ + KGRD IAQAQSGTGKT+ ++++ Q+V ++ +GD++N+Q HAC+GG +VGEDIRKL++G HVVSGTPGRV DMI+R+ LRTR IK+LVLDE+DE+L+RGF++QIYDVYRY Sbjct: 12 KMEFSTSKEVTVAPTFEAMHLKENLLRGIYAYGYESPSAVQSRAIVQVCKGRDTIAQAQSGTGKTATFSISILQSV-------------------------IMGLGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVSGTPGRVADMIRRRNLRTRNIKMLVLDEADELLNRGFREQIYDVYRY 169
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: FAL1_CANGA (ATP-dependent RNA helicase FAL1 OS=Candida glabrata GN=FAL1 PE=3 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 7.048e-52 Identity = 98/184 (53.26%), Postives = 142/184 (77.17%), Query Frame = 3 Query: 129 KMVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLE-HGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLS--RGFKDQIYDVY 671 K+ F++++ ++ +F++M +K+ LLRGIY YGFE PSAIQ RA+ II G+DVIAQAQSGTGKT+ + + Q +D ++QAL+LSPTRELA Q KVV +GD++N++A+A GGK++ +D++K++ HG V+SGTPGRV DMIKR+ + TR +++LVLDE+DE+LS GFK QIYD++ Sbjct: 10 KLKFKSSKKLKISATFESMDLKEGLLRGIYSYGFEAPSAIQSRAITQIISGKDVIAQAQSGTGKTATFTIGMLQAIDLKKHDLQALVLSPTRELAAQIGKVVTNLGDYMNVKAYAMTGGKTMKDDLKKIQKHGCQVISGTPGRVLDMIKRRLIETRHVQILVLDEADELLSDTLGFKHQIYDIF 193 The following BLAST results are available for this feature:
BLAST of FC868508 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868508 ID=FC868508; Name=FC868508; organism=Citrus clementina; type=EST; length=677bpback to top |