FC868510

Overview
NameFC868510
Unique NameFC868510
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length685
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9341 contig Ccv1_Contig9341:1..686. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868510 vs. ExPASy Swiss-Prot
Match: WAKLL_ARATH (Putative wall-associated receptor kinase-like 13 OS=Arabidopsis thaliana GN=WAKL13 PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.922e-20
Identity = 56/177 (31.64%), Postives = 99/177 (55.93%), Query Frame = 2
Query:  122 RSILRKSKNREDRETTNNSKTENMLRNGASVLKELIASSNGNYNPYRIFSAQELKLATNNYDQKNVITEDWGCILYKGFWQE-RLISVMRFRESNRDEHGSCINNIVYAAQMSHNHILKLIGCCLETQIPILAFESVEYGNLRDRILSASQPQIEPLLMKHRLKIAMDIAHALAYLH 649
            R +LRK +         N K +   RNG  +L++ + ++ G     ++FS++EL+ AT+N++   VI +     +YKG   + R ++V +    + D+    IN ++  +Q++H H++KL+GCCLET++PIL +E +  GNL   +           L   R++IA+DI+ A +YLH
Sbjct:  401 RKLLRKRR-------MTNRKRKFFKRNGGLLLQQQLNTTQGRVEKTKLFSSRELEKATDNFNDNRVIGQGGQGTVYKGMLVDGRSVAVKKSNVVDEDKLQEFINEVIILSQINHRHVVKLLGCCLETEVPILVYEFIPNGNLFQHLHEEFDDY--TALWGVRMRIAVDISGAFSYLH 568          
BLAST of FC868510 vs. ExPASy Swiss-Prot
Match: WAKLH_ARATH (Wall-associated receptor kinase-like 9 OS=Arabidopsis thaliana GN=WAKL9 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.922e-20
Identity = 54/160 (33.75%), Postives = 94/160 (58.75%), Query Frame = 2
Query:  173 NSKTENMLRNGASVLKELIASSNGNYNPYRIFSAQELKLATNNYDQKNVITEDWGCILYKGFWQE-RLISVMRFRESNRDEHGSCINNIVYAAQMSHNHILKLIGCCLETQIPILAFESVEYGNLRDRILSASQPQIEPLLMKHRLKIAMDIAHALAYLH 649
            N K +   RNG  +L++ + S+ G      +FS++EL+ AT N+    ++ +     +YKG   + R+++V + +  + D+    IN +V  +Q++H +I+KL+GCCLET++P+L +E +  GNL + +       I       RL+IA+DIA AL+YLH
Sbjct:  404 NQKKKFFKRNGGLLLQQQLISTVGMVEKTIVFSSRELEKATENFSSNRILGQGGQGTVYKGMLVDGRIVAVKKSKVVDEDKLEEFINEVVILSQINHRNIVKLLGCCLETKVPVLVYEFIPNGNLFEHLHDEFDENI-MATWNIRLRIAIDIAGALSYLH 562          
BLAST of FC868510 vs. ExPASy Swiss-Prot
Match: WAKLN_ARATH (Wall-associated receptor kinase-like 18 OS=Arabidopsis thaliana GN=WAKL18 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.282e-20
Identity = 53/152 (34.87%), Postives = 90/152 (59.21%), Query Frame = 2
Query:  197 RNGASVLKELIASSNGNYNPYRIFSAQELKLATNNYDQKNVITEDWGCILYKGFWQE-RLISVMRFRESNRDEHGSCINNIVYAAQMSHNHILKLIGCCLETQIPILAFESVEYGNLRDRILSASQPQIEPLLMKHRLKIAMDIAHALAYLH 649
            RNG  +L + + +  G     R+F+++EL+ AT N+ +  V+       +YKG   + R ++V + +  + D+    IN +V  +Q++H H++KL+GCCLET++P+L +E +  GNL   I    +     +L   RL+IA+DIA AL+YLH
Sbjct:  418 RNGGLLLLQELNTREGYVEKTRVFNSRELEKATENFSENRVLGHGGQGTVYKGMLVDGRTVAVKKSKVIDEDKLQEFINEVVILSQINHRHVVKLLGCCLETEVPMLVYEFIINGNLFKHI-HEEESDDYTMLWGMRLRIAVDIAGALSYLH 568          
BLAST of FC868510 vs. ExPASy Swiss-Prot
Match: WAKLC_ARATH (Wall-associated receptor kinase-like 3 OS=Arabidopsis thaliana GN=WAKL3 PE=2 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 2.776e-19
Identity = 52/152 (34.21%), Postives = 94/152 (61.84%), Query Frame = 2
Query:  197 RNGASVLKELIASSNGNYNPYRIFSAQELKLATNNYDQKNVITEDWGCILYKGFWQE-RLISVMRFRESNRDEHGSCINNIVYAAQMSHNHILKLIGCCLETQIPILAFESVEYGNLRDRILSASQPQIEPLLMKHRLKIAMDIAHALAYLH 649
            RNG  +LK+ + + +G+    +IFS++EL+ AT+N+    V+ +     +YK    +  +++V R +  + D+    IN IV  +Q++H +I+KL+GCCLET++PIL +E +  G+L  R+       +  +  + RL+IA++IA AL+Y+H
Sbjct:  393 RNGGLLLKQQLTTKDGSVEMSKIFSSRELEKATDNFSIDRVLGQGGQGTVYKRMLVDGSIVAVKRSKVVDEDKMEEFINEIVLLSQINHRNIVKLLGCCLETEVPILVYEYIPNGDLFKRLHDEYDDYM--MTWEVRLRIAVEIAGALSYMH 542          
BLAST of FC868510 vs. ExPASy Swiss-Prot
Match: WAK5_ARATH (Wall-associated receptor kinase 5 OS=Arabidopsis thaliana GN=WAK5 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.625e-19
Identity = 50/180 (27.78%), Postives = 105/180 (58.33%), Query Frame = 2
Query:  113 LDMRSILRKSKNREDRETTNNSKTENMLRNGASVLKELIASSNGNYNPYRIFSAQELKLATNNYDQKNVITEDWGCILYKGFWQER-LISVMRFRESNRDEHGSCINNIVYAAQMSHNHILKLIGCCLETQIPILAFESVEYGNLRDRILSASQPQIEPLLMKHRLKIAMDIAHALAYLH 649
            L +  I +K ++R++ E     + +   +NG  +L + ++ +  +    +IF+ + +K AT+ Y++  ++ +     +YKG  Q+  ++++ + R  +R +    IN ++  +Q++H +++KL+GCCLET++P+L +E +  G L D +  +       L  +HRL+IA+++A  LAYLH
Sbjct:  349 LTISYIQQKMRHRKNTEL----RQQFFEQNGGGMLIQRLSGAGPSNVDVKIFTEEGMKEATDGYNESRILGQGGQGTVYKGILQDNSIVAIKKARLGDRSQVEQFINEVLVLSQINHRNVVKLLGCCLETEVPLLVYEFISSGTLFDHLHGSMFD--SSLTWEHRLRIAIEVAGTLAYLH 522          
BLAST of FC868510 vs. ExPASy Swiss-Prot
Match: WAK4_ARATH (Wall-associated receptor kinase 4 OS=Arabidopsis thaliana GN=WAK4 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.734e-19
Identity = 51/180 (28.33%), Postives = 101/180 (56.11%), Query Frame = 2
Query:  113 LDMRSILRKSKNREDRETTNNSKTENMLRNGASVLKELIASSNGNYNPYRIFSAQELKLATNNYDQKNVITEDWGCILYKGFWQER-LISVMRFRESNRDEHGSCINNIVYAAQMSHNHILKLIGCCLETQIPILAFESVEYGNLRDRILSASQPQIEPLLMKHRLKIAMDIAHALAYLH 649
            L +  I  K KN +D E     + +   +NG  +L + ++ +  +    +IF+ + +K AT+ YD+  ++ +     +YKG   +  ++++ + R  +  +    IN ++  +Q++H +++KL+GCCLET++P+L +E +  G L D +  +       L  +HRL++A++IA  LAYLH
Sbjct:  351 LAISCIEHKMKNTKDTEL----RQQFFEQNGGGMLMQRLSGAGPSNVDVKIFTEEGMKEATDGYDENRILGQGGQGTVYKGILPDNSIVAIKKARLGDNSQVEQFINEVLVLSQINHRNVVKLLGCCLETEVPLLVYEFISSGTLFDHLHGSMFD--SSLTWEHRLRMAVEIAGTLAYLH 524          
BLAST of FC868510 vs. ExPASy Swiss-Prot
Match: WAK2_ARATH (Wall-associated receptor kinase 2 OS=Arabidopsis thaliana GN=WAK2 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.734e-19
Identity = 50/180 (27.78%), Postives = 103/180 (57.22%), Query Frame = 2
Query:  113 LDMRSILRKSKNREDRETTNNSKTENMLRNGASVLKELIASSNGNYNPYRIFSAQELKLATNNYDQKNVITEDWGCILYKGFWQER-LISVMRFRESNRDEHGSCINNIVYAAQMSHNHILKLIGCCLETQIPILAFESVEYGNLRDRILSASQPQIEPLLMKHRLKIAMDIAHALAYLH 649
            L +  + +K K+R++ E     + +   +NG  +L + ++ +  +    +IF+ + +K ATN Y +  ++ +     +YKG   +  ++++ + R  NR +    IN ++  +Q++H +++K++GCCLET++P+L +E +  G L D +  +       L  +HRL+IA ++A +LAYLH
Sbjct:  345 LGISCLQQKIKHRKNTEL----RQKFFEQNGGGMLIQRVSGAGPSNVDVKIFTEKGMKEATNGYHESRILGQGGQGTVYKGILPDNSIVAIKKARLGNRSQVEQFINEVLVLSQINHRNVVKVLGCCLETEVPLLVYEFINSGTLFDHLHGSLYD--SSLTWEHRLRIATEVAGSLAYLH 518          
BLAST of FC868510 vs. ExPASy Swiss-Prot
Match: WAKLG_ARATH (Wall-associated receptor kinase-like 8 OS=Arabidopsis thaliana GN=WAKL8 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.055e-18
Identity = 47/152 (30.92%), Postives = 96/152 (63.16%), Query Frame = 2
Query:  197 RNGASVLKELIASSNGNYNPYRIFSAQELKLATNNYDQKNVITEDWGCILYKGFWQERLISVMRFRESNRDEH-GSCINNIVYAAQMSHNHILKLIGCCLETQIPILAFESVEYGNLRDRILSASQPQIEPLLMKHRLKIAMDIAHALAYLH 649
            RNG  +L++  +  +G+ N  ++FS+ +L+ AT+ ++   ++ +     +YKG  ++ +I  ++  ++ ++E+    IN I+  +Q++H +++K++GCCLET++PIL +E +   NL D + + S+    P+  + RL IA ++A AL+YLH
Sbjct:  355 RNGGLLLQQQTSFLHGSVNRTKVFSSNDLENATDRFNASRILGQGGQGTVYKGMLEDGMIVAVKKSKALKEENLEEFINEIILLSQINHRNVVKILGCCLETEVPILVYEFIPNRNLFDHLHNPSED--FPMSWEVRLCIACEVADALSYLH 504          
BLAST of FC868510 vs. ExPASy Swiss-Prot
Match: WAK1_ARATH (Wall-associated receptor kinase 1 OS=Arabidopsis thaliana GN=WAK1 PE=1 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 5.235e-18
Identity = 45/152 (29.61%), Postives = 88/152 (57.89%), Query Frame = 2
Query:  197 RNGASVLKELIASSNGNYNPYRIFSAQELKLATNNYDQKNVITEDWGCILYKGFWQER-LISVMRFRESNRDEHGSCINNIVYAAQMSHNHILKLIGCCLETQIPILAFESVEYGNLRDRILSASQPQIEPLLMKHRLKIAMDIAHALAYLH 649
            +NG  +L + ++ +  +    +IF+   +K ATN Y +  ++ +     +YKG   +  ++++ + R  +  +    IN ++  +Q++H +++KL+GCCLET++P+L +E +  G L D +  +       L  +HRLKIA+++A  LAYLH
Sbjct:  374 QNGGGMLTQRLSGAGPSNVDVKIFTEDGMKKATNGYAESRILGQGGQGTVYKGILPDNSIVAIKKARLGDSSQVEQFINEVLVLSQINHRNVVKLLGCCLETEVPLLVYEFITNGTLFDHLHGSMID--SSLTWEHRLKIAIEVAGTLAYLH 523          
BLAST of FC868510 vs. ExPASy Swiss-Prot
Match: WAK3_ARATH (Wall-associated receptor kinase 3 OS=Arabidopsis thaliana GN=WAK3 PE=2 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 8.929e-18
Identity = 43/152 (28.29%), Postives = 92/152 (60.53%), Query Frame = 2
Query:  197 RNGASVLKELIASSNGNYNPYRIFSAQELKLATNNYDQKNVITEDWGCILYKGFWQER-LISVMRFRESNRDEHGSCINNIVYAAQMSHNHILKLIGCCLETQIPILAFESVEYGNLRDRILSASQPQIEPLLMKHRLKIAMDIAHALAYLH 649
            +NG  +L + ++ +  +   ++IF+ + +K ATN YD+  ++ +     +YKG   +  ++++ + R ++  +    I+ ++  +Q++H +++K++GCCLET++P+L +E +  G L D +  +       L  +HRL+IA+++A  LAYLH
Sbjct:  380 QNGGGMLIQRLSGAGLSNIDFKIFTEEGMKEATNGYDESRILGQGGQGTVYKGILPDNTIVAIKKARLADSRQVDQFIHEVLVLSQINHRNVVKILGCCLETEVPLLVYEFITNGTLFDHLHGSIFD--SSLTWEHRLRIAIEVAGTLAYLH 529          
The following BLAST results are available for this feature:
BLAST of FC868510 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
WAKLL_ARATH1.922e-2031.64Putative wall-associated receptor kinase-like 13 O... [more]
WAKLH_ARATH1.922e-2033.75Wall-associated receptor kinase-like 9 OS=Arabidop... [more]
WAKLN_ARATH4.282e-2034.87Wall-associated receptor kinase-like 18 OS=Arabido... [more]
WAKLC_ARATH2.776e-1934.21Wall-associated receptor kinase-like 3 OS=Arabidop... [more]
WAK5_ARATH3.625e-1927.78Wall-associated receptor kinase 5 OS=Arabidopsis t... [more]
WAK4_ARATH4.734e-1928.33Wall-associated receptor kinase 4 OS=Arabidopsis t... [more]
WAK2_ARATH4.734e-1927.78Wall-associated receptor kinase 2 OS=Arabidopsis t... [more]
WAKLG_ARATH1.055e-1830.92Wall-associated receptor kinase-like 8 OS=Arabidop... [more]
WAK1_ARATH5.235e-1829.61Wall-associated receptor kinase 1 OS=Arabidopsis t... [more]
WAK3_ARATH8.929e-1828.29Wall-associated receptor kinase 3 OS=Arabidopsis t... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC31001C07EF AbioticL1 Citrus clementina cDNA clone C31001C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868510 ID=FC868510; Name=FC868510; organism=Citrus clementina; type=EST; length=685bp
ATATGTGTTTTGAAGTTCCAGCAACAATTTTTAGTTTTGTACACACACAA
ATATGATTCATTTGCTGTGTTCAAGTATATAAACTAATTATATTTTAATT
GATTTCTACTTTTTAGATATGAGGTCCATTTTGAGAAAATCCAAGAATAG
GGAGGACAGAGAGACTACCAATAATAGTAAAACAGAAAATATGTTGAGAA
ATGGCGCGAGTGTGCTAAAAGAGTTGATAGCGTCTTCTAATGGTAACTAT
AATCCTTATCGTATCTTCTCTGCTCAAGAACTCAAGCTAGCAACTAACAA
CTATGACCAGAAAAACGTTATAACTGAAGACTGGGGGTGTATATTGTACA
AGGGATTTTGGCAGGAGCGCCTAATTTCTGTTATGAGGTTTCGAGAATCT
AATCGTGATGAACACGGAAGTTGTATTAACAACATTGTCTATGCAGCACA
AATGAGCCACAATCATATTTTAAAGCTAATTGGATGCTGCTTAGAGACTC
AAATTCCCATTCTAGCTTTTGAATCTGTGGAGTATGGGAATCTTCGTGAT
CGTATTTTAAGTGCTTCTCAACCTCAGATTGAACCATTACTAATGAAACA
TAGGTTAAAGATTGCAATGGATATTGCACATGCACTTGCTTATCTTCACT
TTGGATTTCCAGGCCAATCGTTTATAGAGATTTCA
back to top