FC868510

Overview
NameFC868510
Unique NameFC868510
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length685
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9341 contig Ccv1_Contig9341:1..686. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868510 vs. ExPASy Swiss-Prot
Match: WAKLQ_ARATH (Wall-associated receptor kinase-like 20 OS=Arabidopsis thaliana GN=WAKL20 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.417e-15
Identity = 42/145 (28.97%), Postives = 79/145 (54.48%), Query Frame = 2
Query:  218 KELIASSNGNYNPYRIFSAQELKLATNNYDQKNVI-TEDWGCILYKGFWQERLISVMRFRESNRDEHGSCINNIVYAAQMSHNHILKLIGCCLETQIPILAFESVEYGNLRDRILSASQPQIEPLLMKHRLKIAMDIAHALAYLH 649
            +E + S+N      RIF+ +E+  ATNN+ + N+I T  +G +         + ++ R + +N       +N +    Q++H  +++L+GCC++ ++P+L +E +  G L + +  +S    +PL  + RL+IA   A  LAYLH
Sbjct:  335 REEMLSANSTGKSSRIFTGREITKATNNFSKDNLIGTGGFGEVFKAVLEDGTITAIKRAKLNNTKGTDQILNEVRILCQVNHRSLVRLLGCCVDLELPLLIYEFIPNGTLFEHLHGSSDRTWKPLTWRRRLQIAYQTAEGLAYLH 479          
BLAST of FC868510 vs. ExPASy Swiss-Prot
Match: Y5241_ARATH (Probable receptor-like protein kinase At5g24010 OS=Arabidopsis thaliana GN=At5g24010 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.822e-14
Identity = 53/204 (25.98%), Postives = 101/204 (49.51%), Query Frame = 2
Query:   50 NMIHLLCSSI*TNYILIDFYFLDMRSILRKSKNR-EDRETTNNSKTENMLRNGASVLKELIASSNGNYNPYRIFSAQELKLATNNYDQKNVITEDWGCILYKGFWQERL-ISVMRFRESNRDEHGSCINNIVYAAQMSHNHILKLIGCCLETQIPILAFESVEYGNLRDRILSASQPQIEPLLMKHRLKIAMDIAHALAYLHFG 655
            N++ ++  S+   ++ +  +FL +  + R+  N+    E+T  +       +  S   E   SS+G Y+  RI S  EL+  TNN+D+  VI      ++++G  ++   ++V R    +R      ++ I   +++ H H++ L+G C E    IL +E ++ G L+  +  ++ P   PL  K RL++ +  A  L YLH G
Sbjct:  406 NVVWIVVGSVLGGFVFLSLFFLSVLCLCRRKNNKTRSSESTGWTPLRRFRGSSNSRTTERTVSSSG-YHTLRI-SFAELQSGTNNFDRSLVIGVGGFGMVFRGSLKDNTKVAVKRGSPGSRQGLPEFLSEITILSKIRHRHLVSLVGYCEEQSEMILVYEYMDKGPLKSHLYGSTNP---PLSWKQRLEVCIGAARGLHYLHTG 604          
BLAST of FC868510 vs. ExPASy Swiss-Prot
Match: Y3545_ARATH (Probable receptor-like protein kinase At3g55450 OS=Arabidopsis thaliana GN=At3g55450 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.822e-14
Identity = 46/140 (32.86%), Postives = 74/140 (52.86%), Query Frame = 2
Query:  266 FSAQELKLATNNYDQKNVITED-WGCILYKGFWQER-----------LISVMRFRESNRDEHGSCINNIVYAAQMSHNHILKLIGCCLETQIPILAFESVEYGNLRDRILSASQPQIEPLLMKHRLKIAMDIAHALAYLH 649
            FS  ELKLAT N+   +V+ E  +GC+ ++G+  E            +I+V R        H   +  I Y  Q+SH +++KLIG CLE +  +L +E +  G+L + + +      +PL    R+K+A+D A  LA+LH
Sbjct:   49 FSFNELKLATRNFRSDSVVGEGGFGCV-FRGWLDETTLTPTKSSSGLVIAVKRLNPDGFQGHREWLTEINYLGQLSHPNLVKLIGYCLEDEQRLLVYEFMHKGSLENHLFANGNKDFKPLSWILRIKVALDAAKGLAFLH 187          
BLAST of FC868510 vs. ExPASy Swiss-Prot
Match: APK1A_ARATH (Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.927e-12
Identity = 46/140 (32.86%), Postives = 73/140 (52.14%), Query Frame = 2
Query:  266 FSAQELKLATNNYDQKNVITED-WGCILYKGFWQER-----------LISVMRFRESNRDEHGSCINNIVYAAQMSHNHILKLIGCCLETQIPILAFESVEYGNLRDRILSASQPQIEPLLMKHRLKIAMDIAHALAYLH 649
            FS  ELK AT N+   +V+ E  +GC+ +KG+  E+           +I+V +  +     H   +  + Y  Q SH H++KLIG CLE +  +L +E +  G+L + +        +PL  K RLK+A+  A  LA+LH
Sbjct:   56 FSFAELKSATRNFRPDSVLGEGGFGCV-FKGWIDEKSLTASRPGTGLVIAVKKLNQDGWQGHQEWLAEVNYLGQFSHRHLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGL-YFQPLSWKLRLKVALGAAKGLAFLH 193          
BLAST of FC868510 vs. ExPASy Swiss-Prot
Match: BIK1_ARATH (Serine/threonine-protein kinase BIK1 OS=Arabidopsis thaliana GN=BIK1 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.516e-12
Identity = 46/144 (31.94%), Postives = 76/144 (52.78%), Query Frame = 2
Query:  254 PYRIFSAQELKLATNNYDQKNVITED-WGCILYKGFWQER-----------LISVMRFRESNRDEHGSCINNIVYAAQMSHNHILKLIGCCLETQIPILAFESVEYGNLRDRILSASQPQIEPLLMKHRLKIAMDIAHALAYLH 649
            P + F+  ELKLAT N+   +VI E  +GC+ +KG+  E            +I+V +  +     H   +  I Y  Q+SH +++KLIG CLE +  +L +E ++ G+L + +        +PL    R+ +A+D A  LA+LH
Sbjct:   51 PVKSFTFNELKLATRNFRPDSVIGEGGFGCV-FKGWLDESTLTPTKPGTGLVIAVKKLNQEGFQGHREWLTEINYLGQLSHPNLVKLIGYCLEDEHRLLVYEFMQKGSLENHLFRRG-AYFKPLPWFLRVNVALDAAKGLAFLH 192          
BLAST of FC868510 vs. ExPASy Swiss-Prot
Match: TMK1_ARATH (Probable receptor protein kinase TMK1 OS=Arabidopsis thaliana GN=TMK1 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.633e-11
Identity = 43/141 (30.50%), Postives = 70/141 (49.65%), Query Frame = 2
Query:  263 IFSAQELKLATNNYDQKNVITEDWGCILYKGFWQERL-ISVMRFRESNRDEHGSCI--NNIVYAAQMSHNHILKLIGCCLETQIPILAFESVEYGNLRDRILSASQPQIEPLLMKHRLKIAMDIAHALAYLHFGFPGQSFI 676
            + S Q L+  TNN+   N++      ++YKG   +   I+V R         G     + I    ++ H H++ L+G CL+    +L +E +  G L   +   S+  ++PLL K RL +A+D+A  + YLH G   QSFI
Sbjct:  575 LISIQVLRSVTNNFSSDNILGSGGFGVVYKGELHDGTKIAVKRMENGVIAGKGFAEFKSEIAVLTKVRHRHLVTLLGYCLDGNEKLLVYEYMPQGTLSRHLFEWSEEGLKPLLWKQRLTLALDVARGVEYLH-GLAHQSFI 714          
BLAST of FC868510 vs. ExPASy Swiss-Prot
Match: Y5389_ARATH (Probable receptor-like protein kinase At5g38990 OS=Arabidopsis thaliana GN=At5g38990 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.745e-11
Identity = 50/179 (27.93%), Postives = 83/179 (46.37%), Query Frame = 2
Query:  134 RKSKNREDRETTNNSKTENM---LRNGASVLKELIASSNGNYNPYRIFSAQELKLATNNYDQKNVITEDWGCILYKGFWQ--ERLISVMRFRESNRDEHGSCINNIVYAAQMSHNHILKLIGCCLETQIPILAFESVEYGNLRDRILSASQPQIEPLLMKHRLKIAMDIAHALAYLHFG 655
            +K  N    +TTN   T +    L +G        ASS  + +  R FS  E+K ATN++++K +I       +YKG       L++V R   ++          +   +++ H H++ LIG C +    +L +E + +G L+D +    +    PL  K RL+I +  A  L YLH G
Sbjct:  467 KKKSNESSVDTTNKPSTNSSWGPLLHGTGSTNTKSASSLPS-DLCRRFSIYEIKSATNDFEEKLIIGVGGFGSVYKGRIDGGATLVAVKRLEITSNQGAKEFDTELEMLSKLRHVHLVSLIGYCDDDNEMVLVYEYMPHGTLKDHLFRRDKASDPPLSWKRRLEICIGAARGLQYLHTG 644          
BLAST of FC868510 vs. ExPASy Swiss-Prot
Match: Y1534_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 4.745e-11
Identity = 41/129 (31.78%), Postives = 69/129 (53.49%), Query Frame = 2
Query:  266 FSAQELKLATNNYDQKNVITEDWGCILYKG-FWQERLISVMRFRESNRDEHGSCINNIVYAAQMSHNHILKLIGCCLETQIPILAFESVEYGNLRDRILSASQPQIEPLLMKHRLKIAMDIAHALAYLH 649
            FS +++K+ATNN+D  N I E     +YKG  +   +I+V +    ++  +   +N I   + + H +++KL GCC+E    +L +E VE  +L   +    + Q+  L    R KI + +A  LAYLH
Sbjct:  612 FSLRQIKIATNNFDSANRIGEGGFGPVYKGKLFDGTIIAVKQLSTGSKQGNREFLNEIGMISALHHPNLVKLYGCCVEGGQLLLVYEFVENNSLARALFGPQETQLR-LDWPTRRKICIGVARGLAYLH 739          
BLAST of FC868510 vs. ExPASy Swiss-Prot
Match: WAKLP_ARATH (Wall-associated receptor kinase-like 15 OS=Arabidopsis thaliana GN=WAKL15 PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 6.198e-11
Identity = 40/134 (29.85%), Postives = 70/134 (52.24%), Query Frame = 2
Query:  260 RIFSAQELKLATNNYDQKNVITEDWGCILYKGFWQE-RLISVMRFRESNRDEHGSCINNIVYAAQMSHNHILKLIGCCLETQIPILAFESVEYGNLRDRIL---SASQPQIEPLLMKHRLKIAMDIAHALAYLH 649
            RIF+ +E+  AT+N+ + N++       ++KG   +   ++V R +  N       +N +    Q+SH +++KL+GCC+E ++P+L +E V  G L + I           + L ++ RL IA   A  L YLH
Sbjct:  340 RIFTGKEIVKATDNFAKSNLLGFGGFGEVFKGNLDDGTTVAVKRAKLGNEKSIYQIVNEVQILCQVSHKNLVKLLGCCIELEMPVLVYEFVPNGTLFEHIYGGGGGGGGLYDHLPLRRRLMIAHQTAQGLDYLH 473          
BLAST of FC868510 vs. ExPASy Swiss-Prot
Match: Y1357_ARATH (Probable receptor-like protein kinase At1g30570 OS=Arabidopsis thaliana GN=At1g30570 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.094e-11
Identity = 58/203 (28.57%), Postives = 92/203 (45.32%), Query Frame = 2
Query:   92 ILIDFYFLDMRSIL--RKSKNREDRETTN-----------NSKTENMLRNGASV-LKELIASSNGNYNPYRIFSAQELKLATNNYDQKNVITEDWGCILYKGFWQE-RLISVMRFRESNRDEHGSCINNIVYAAQMSHNHILKLIGCCLETQIPILAFESVEYGNLRDRILSASQPQIEPLLMKHRLKIAMDIAHALAYLHFG 655
            I+I F FL +  +   +K +++ D    N           N+ T N    G S+ L  L AS+ G     R F+  E++ AT N+D    I       +Y+G  ++  LI++ R    ++         IV  +++ H H++ LIG C E    IL +E +  G LR  +  ++ P   PL  K RL+  +  A  L YLH G
Sbjct:  441 IIIFFVFLGILVVCLCKKRRSKSDESKNNPPGWRPLFLHVNNSTANAKATGGSLRLNTLAASTMG-----RKFTLAEIRAATKNFDDGLAIGVGGFGKVYRGELEDGTLIAIKRATPHSQQGLAEFETEIVMLSRLRHRHLVSLIGFCDEHNEMILVYEYMANGTLRSHLFGSNLP---PLSWKQRLEACIGSARGLHYLHTG 635          
The following BLAST results are available for this feature:
BLAST of FC868510 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
WAKLQ_ARATH5.417e-1528.97Wall-associated receptor kinase-like 20 OS=Arabido... [more]
Y5241_ARATH7.822e-1425.98Probable receptor-like protein kinase At5g24010 OS... [more]
Y3545_ARATH7.822e-1432.86Probable receptor-like protein kinase At3g55450 OS... [more]
APK1A_ARATH1.927e-1232.86Protein kinase APK1A, chloroplastic OS=Arabidopsis... [more]
BIK1_ARATH2.516e-1231.94Serine/threonine-protein kinase BIK1 OS=Arabidopsi... [more]
TMK1_ARATH3.633e-1130.50Probable receptor protein kinase TMK1 OS=Arabidops... [more]
Y5389_ARATH4.745e-1127.93Probable receptor-like protein kinase At5g38990 OS... [more]
Y1534_ARATH4.745e-1131.78Probable LRR receptor-like serine/threonine-protei... [more]
WAKLP_ARATH6.198e-1129.85Wall-associated receptor kinase-like 15 OS=Arabido... [more]
Y1357_ARATH8.094e-1128.57Probable receptor-like protein kinase At1g30570 OS... [more]

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Properties
Property NameValue
Genbank descriptionC31001C07EF AbioticL1 Citrus clementina cDNA clone C31001C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868510 ID=FC868510; Name=FC868510; organism=Citrus clementina; type=EST; length=685bp
ATATGTGTTTTGAAGTTCCAGCAACAATTTTTAGTTTTGTACACACACAA
ATATGATTCATTTGCTGTGTTCAAGTATATAAACTAATTATATTTTAATT
GATTTCTACTTTTTAGATATGAGGTCCATTTTGAGAAAATCCAAGAATAG
GGAGGACAGAGAGACTACCAATAATAGTAAAACAGAAAATATGTTGAGAA
ATGGCGCGAGTGTGCTAAAAGAGTTGATAGCGTCTTCTAATGGTAACTAT
AATCCTTATCGTATCTTCTCTGCTCAAGAACTCAAGCTAGCAACTAACAA
CTATGACCAGAAAAACGTTATAACTGAAGACTGGGGGTGTATATTGTACA
AGGGATTTTGGCAGGAGCGCCTAATTTCTGTTATGAGGTTTCGAGAATCT
AATCGTGATGAACACGGAAGTTGTATTAACAACATTGTCTATGCAGCACA
AATGAGCCACAATCATATTTTAAAGCTAATTGGATGCTGCTTAGAGACTC
AAATTCCCATTCTAGCTTTTGAATCTGTGGAGTATGGGAATCTTCGTGAT
CGTATTTTAAGTGCTTCTCAACCTCAGATTGAACCATTACTAATGAAACA
TAGGTTAAAGATTGCAATGGATATTGCACATGCACTTGCTTATCTTCACT
TTGGATTTCCAGGCCAATCGTTTATAGAGATTTCA
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