FC868512
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868512 vs. ExPASy Swiss-Prot
Match: CB21_ORYSJ (Chlorophyll a-b binding protein 1, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB1R PE=2 SV=2) HSP 1 Score: 110.153 bits (274), Expect = 1.207e-23 Identity = 55/106 (51.89%), Postives = 68/106 (64.15%), Query Frame = 2 Query: 362 ARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAMLGALGALVPEVLDMVGAFHFVEPVWWRVGYSKLQGETLDYLG 679 A + S WYG +R +LGP+ + PSYLTGE PGDYG+D AGLS DP F K E++H+RWAMLGALG + PE+L G F E VW++ G LDYLG Sbjct: 43 ASSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGV-KFGEAVWFKAGSQIFSEGGLDYLG 147
BLAST of FC868512 vs. ExPASy Swiss-Prot
Match: CB21_ARATH (Chlorophyll a-b binding protein 165/180, chloroplastic OS=Arabidopsis thaliana GN=LHCP-A PE=1 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.207e-23 Identity = 53/102 (51.96%), Postives = 66/102 (64.71%), Query Frame = 2 Query: 374 SLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAMLGALGALVPEVLDMVGAFHFVEPVWWRVGYSKLQGETLDYLG 679 S WYG +R ++LGP + PSYLTGE PGDYG+D AGLS DP F + E++H+RWAMLGALG + PE+L G F E VW++ G LDYLG Sbjct: 48 SPWYGSDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGV-KFGEAVWFKAGSQIFSDGGLDYLG 148
BLAST of FC868512 vs. ExPASy Swiss-Prot
Match: CB2A_PYRPY (Chlorophyll a-b binding protein 1A, chloroplastic OS=Pyrus pyrifolia PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.576e-23 Identity = 54/103 (52.43%), Postives = 66/103 (64.08%), Query Frame = 2 Query: 371 ESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAMLGALGALVPEVLDMVGAFHFVEPVWWRVGYSKLQGETLDYLG 679 +S WYG +R +LGP + PSYLTGE PGDYG+D AGLS DP F K E++H+RWAMLGALG + PE+L G F E VW++ G LDYLG Sbjct: 59 DSPWYGPDRVMYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGV-KFGEAVWFKAGAQIFSEGGLDYLG 160
BLAST of FC868512 vs. ExPASy Swiss-Prot
Match: CB24_PETSP (Chlorophyll a-b binding protein 25, chloroplastic OS=Petunia sp. GN=CAB25 PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.576e-23 Identity = 54/109 (49.54%), Postives = 67/109 (61.47%), Query Frame = 2 Query: 353 ARQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAMLGALGALVPEVLDMVGAFHFVEPVWWRVGYSKLQGETLDYLG 679 A+ + S WYG +R ++LGP + PSYLTGE PGDYG+D AGLS DP F K E++H RWAMLGALG + PE+ G F E VW++ G LDYLG Sbjct: 41 AKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGV-KFGEAVWFKAGSQIFSEGGLDYLG 148
BLAST of FC868512 vs. ExPASy Swiss-Prot
Match: CB22_MAIZE (Chlorophyll a-b binding protein, chloroplastic OS=Zea mays PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.576e-23 Identity = 55/106 (51.89%), Postives = 67/106 (63.21%), Query Frame = 2 Query: 362 ARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAMLGALGALVPEVLDMVGAFHFVEPVWWRVGYSKLQGETLDYLG 679 A + S WYG +R +LGP+ + PSYLTGE PGDYG+D AGLS DP F K E++H RWAMLGALG + PE+L G F E VW++ G LDYLG Sbjct: 43 AASGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV-KFGEAVWFKAGSQIFSEGGLDYLG 147
BLAST of FC868512 vs. ExPASy Swiss-Prot
Match: CB2A_PINSY (Chlorophyll a-b binding protein type 2 member 1A, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.059e-23 Identity = 54/103 (52.43%), Postives = 66/103 (64.08%), Query Frame = 2 Query: 371 ESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAMLGALGALVPEVLDMVGAFHFVEPVWWRVGYSKLQGETLDYLG 679 +S WYG +R +LGP + PSYLTGE PGDYG+D AGLS DP F K E++H+RWAMLGALG + PE+L G F E VW++ G LDYLG Sbjct: 59 DSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGV-KFGEAVWFKAGAQIFSEGGLDYLG 160
BLAST of FC868512 vs. ExPASy Swiss-Prot
Match: CB25_PETSP (Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp. GN=CAB91R PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.689e-23 Identity = 64/158 (40.51%), Postives = 84/158 (53.16%), Query Frame = 2 Query: 209 LAGVLVFSAIPFTAVKAIANSPLG-ELLQNRMLETKKAALQDSSKFKALARQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAMLGALGALVPEVLDMVGAFHFVEPVWWRVGYSKLQGETLDYLG 679 +A + + P A KA+ SP E+ N +K + A+ + S WYG +R ++LGP + PSYLTGE PGDYG+D A LS DP F K E++H RWAMLGALG + PE+L G F E VW++ G LDYLG Sbjct: 1 MAAATMALSSPSFAGKAVKFSPSSSEITGNGKATMRKTVTK--------AKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAELSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV-KFGEAVWFKAGSQIFSEGGLDYLG 149
BLAST of FC868512 vs. ExPASy Swiss-Prot
Match: CB21_SINAL (Chlorophyll a-b binding protein 1, chloroplastic OS=Sinapis alba GN=CAB1 PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.689e-23 Identity = 53/102 (51.96%), Postives = 65/102 (63.73%), Query Frame = 2 Query: 374 SLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAMLGALGALVPEVLDMVGAFHFVEPVWWRVGYSKLQGETLDYLG 679 S WYG +R ++LGP + PSYLTGE PGDYG+D AGLS DP F + E++H RWAMLGALG + PE+L G F E VW++ G LDYLG Sbjct: 47 SPWYGSDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLARNGV-KFGEAVWFKAGSQIFSEGGLDYLG 147
BLAST of FC868512 vs. ExPASy Swiss-Prot
Match: CB22_PETSP (Chlorophyll a-b binding protein 22L, chloroplastic OS=Petunia sp. GN=CAB22L PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.512e-23 Identity = 54/109 (49.54%), Postives = 66/109 (60.55%), Query Frame = 2 Query: 353 ARQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAMLGALGALVPEVLDMVGAFHFVEPVWWRVGYSKLQGETLDYLG 679 A+ + S WYG +R ++LGP + PSYLTGE PGDYG+D AGLS DP F K E++H RWAMLGALG + PE+ G F E VW + G LDYLG Sbjct: 42 AKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGV-KFGEAVWLKAGSQIFSEGGLDYLG 149
BLAST of FC868512 vs. ExPASy Swiss-Prot
Match: CB21_PEA (Chlorophyll a-b binding protein AB96 (Fragment) OS=Pisum sativum GN=AB96 PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.586e-23 Identity = 53/106 (50.00%), Postives = 67/106 (63.21%), Query Frame = 2 Query: 362 ARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAMLGALGALVPEVLDMVGAFHFVEPVWWRVGYSKLQGETLDYLG 679 A + S W+G + ++LGP + PSYLTGE PGDYG+D AGLS DP F K E++H+RWAMLGALG + PE+L G F E VW++ G LDYLG Sbjct: 6 ASSSSPWHGPDGVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGV-KFGEAVWFKAGSQIFSEGGLDYLG 110 The following BLAST results are available for this feature:
BLAST of FC868512 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868512 ID=FC868512; Name=FC868512; organism=Citrus clementina; type=EST; length=727bpback to top |