FC868535
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868535 vs. ExPASy Swiss-Prot
Match: SYN_DESVH (Asparaginyl-tRNA synthetase OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=asnS PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.549e-21 Identity = 62/139 (44.60%), Postives = 85/139 (61.15%), Query Frame = 3 Query: 273 VRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDV---ADLGQLVPTGTCVYVEGMLKNPPEGTKQKIELRVQKVVDVGMVDPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGF 680 +R+ GWV+T R+ KG F+FLE+NDGSC AN+Q IVD+ + A++G V TG V + G L P G QK E+RVQ + +G D YP+ K + + EFLR R RTN A RIR+ A+A H F +++GF Sbjct: 19 IRLCGWVRTRRD-AKG-FSFLEINDGSCLANIQAIVDEGIPAYANIGA-VSTGAAVDITGELVESP-GKGQKWEVRVQTLTLLGAADAETYPLQKKRHSDEFLRSIAHLRARTNKYGAAFRIRSEAAFAIHEFYRERGF 153
BLAST of FC868535 vs. ExPASy Swiss-Prot
Match: SYN_CYTH3 (Asparaginyl-tRNA synthetase OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=asnS PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.549e-21 Identity = 59/160 (36.88%), Postives = 93/160 (58.13%), Query Frame = 3 Query: 210 RVLIKSILTRPDGGAGLAGQQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQL--VPTGTCVYVEGMLKNPPEGTKQKIELRVQKVVDVGMVDPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFL 683 R+ IK +L+ + QQV + GWV+T R G AF+ +NDGS +Q+++D + QL V TG C+ + G + +G Q IE++ + +G+ DP YP+ K +LEFLR+ RPRTNT + V R+R+A+A+A H+F ++GF+ Sbjct: 3 RIKIKELLSN---SSQYIDQQVVLKGWVRTKR--GNKHVAFVALNDGSTIHTIQIVLDVAKFNEEQLKDVTTGACISISGKVVTS-QGAGQSIEVQGDTLEVIGVADPETYPLQKKGHSLEFLREIAHLRPRTNTFSCVLRLRHAMAFAVHSFFNEKGFV 156
BLAST of FC868535 vs. ExPASy Swiss-Prot
Match: SYN_THEEB (Asparaginyl-tRNA synthetase OS=Thermosynechococcus elongatus (strain BP-1) GN=asnS PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.489e-20 Identity = 60/146 (41.10%), Postives = 80/146 (54.79%), Query Frame = 3 Query: 255 GLAGQQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQLVP---TGTCVYVEGMLKNPPEGTKQKIELRVQKVVDVGMVDPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFL 683 G G ++ V GWV+T RE + +F + +NDGS A LQV++ VA + TG G L P G Q IEL +++ G DP YP+ K + + EFLR RPRTNT+ AV R+RNA A A H F Q++GFL Sbjct: 12 GQVGDRITVKGWVRTKRELKECTF--VNLNDGSTLAGLQVVIPNTVAAATPTMKDLTTGAAAEFTGELVRSP-GKNQAIELHAEEIHLWGTADPETYPLQKKRHSFEFLRTIAHLRPRTNTLGAVMRVRNACATAIHQFFQERGFL 154
BLAST of FC868535 vs. ExPASy Swiss-Prot
Match: SYN_PASMU (Asparaginyl-tRNA synthetase OS=Pasteurella multocida GN=asnS PE=3 SV=2) HSP 1 Score: 98.9821 bits (245), Expect = 2.489e-20 Identity = 60/144 (41.67%), Postives = 86/144 (59.72%), Query Frame = 3 Query: 264 GQQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQLV---PTGTCVYVEG-MLKNPPEGTKQKIELRVQKVVDVGMV-DPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGF 680 G+ V V GW++T R+ K +FL + DGSC +Q IV+ D+ + V TG V V G ++++P EG Q +EL+ +KV G V DP YP+ + ++E+LR+ RPRTN I AVAR+R+ LA A H F +QGF Sbjct: 18 GETVTVRGWIRTRRDS-KAGLSFLAIYDGSCFDPIQAIVNNDIENYETEVLRLTTGCSVIVTGTVVESPAEG--QAVELQAEKVEVAGWVEDPETYPMAAKRHSIEYLREVAHLRPRTNIIGAVARVRHCLAQAIHRFFHEQGF 158
BLAST of FC868535 vs. ExPASy Swiss-Prot
Match: SYN_PARD8 (Asparaginyl-tRNA synthetase OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=asnS PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.489e-20 Identity = 58/141 (41.13%), Postives = 79/141 (56.03%), Query Frame = 3 Query: 264 GQQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQLVP--TGTCVYVEGMLKNPPEGTKQKIELRVQKVVDVGMVDPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGF 680 G V V GWV+T R G F+ +NDGS N+Q++VD D L P TG + V G+L +G Q +E++ ++ G DPA YP+ K ++EFLR+ RPRTNT AV RIR+ +AYA H F +GF Sbjct: 19 GTTVNVKGWVRTRR--GSKQVNFIALNDGSTINNVQIVVDVDKLGDEFLKPITTGASISVNGILTQS-QGKGQSVEIQATEIEIFGTADPATYPLQKKGHSMEFLREIAHLRPRTNTFGAVFRIRHNMAYAIHKFFHDRGF 156
BLAST of FC868535 vs. ExPASy Swiss-Prot
Match: SYN_GEOMG (Asparaginyl-tRNA synthetase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=asnS PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.489e-20 Identity = 65/162 (40.12%), Postives = 94/162 (58.02%), Query Frame = 3 Query: 204 SDRVLIKSILTRPDGGAGLAGQQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQL--VPTGTCVYVEGMLKNPPEGTKQKIELRVQKVVDVGMVDPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFL 683 S R+ I++ L G GL G ++ V GWV+T R GK AFL +NDGSC ANLQV+ + +A + + TG V V G L + P + Q EL +V +G+ D + YP+ K + + E+LR RPR+NT AV R+R+++A A H F ++GFL Sbjct: 2 SARIRIRNALA----GEGL-GNEIMVKGWVRTIRT-GK-EVAFLALNDGSCFANLQVVAEPGLATFADVCAIGTGAAVAVRGRLVDSP-ASGQCYELHADEVAVIGLADES-YPLQKKRHSFEYLRSIAHLRPRSNTFGAVFRVRSSVAQAVHRFFAERGFL 154
BLAST of FC868535 vs. ExPASy Swiss-Prot
Match: SYN_CLONN (Asparaginyl-tRNA synthetase OS=Clostridium novyi (strain NT) GN=asnS PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.489e-20 Identity = 60/161 (37.27%), Postives = 91/161 (56.52%), Query Frame = 3 Query: 207 DRVLIKSILTRPDGGAGLAGQQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQL--VPTGTCVYVEGMLKNPPEGTKQKIELRVQKVVDVGMVDPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFL 683 + VL+K + + AG++V++ GW++T R K F F+EVNDGS N+QV+ ++ + ++ + + VEG + EG KQ E+ +KVV G D A YP+ K + T E+LR RPR+N +AV R+R+ AYA H F Q QGF+ Sbjct: 2 ETVLVKQLYRETEK---FAGKEVKISGWIRTLRASNK--FGFIEVNDGSFFKNIQVVFGAELENFKEISKYAISSSISVEGEVVIT-EGAKQPFEIHAKKVVLEGKSD-ADYPLQKKRHTFEYLRSIAHLRPRSNAFSAVFRVRSLAAYAIHKFFQDQGFV 155
BLAST of FC868535 vs. ExPASy Swiss-Prot
Match: SYN_HAEPS (Asparaginyl-tRNA synthetase OS=Haemophilus parasuis serovar 5 (strain SH0165) GN=asnS PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.250e-20 Identity = 61/149 (40.94%), Postives = 88/149 (59.06%), Query Frame = 3 Query: 249 GAGLAGQQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQLV---PTGTCVYVEGML-KNPPEGTKQKIELRVQKVVDVGMV-DPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGF 680 G G++V V GWV+T R+ K +FL V DGSC +Q I++ D+++ V G V V G++ ++P EG Q +EL+ + V VG V DP YP+ + ++E+LR+ RPRTN I AVAR+R+ LA A H F +QGF Sbjct: 13 GKVAVGEEVAVRGWVRTRRDS-KAGLSFLAVYDGSCFDPIQAIINNDLSNYQDEVLRLTAGCSVIVTGVIVESPAEG--QAVELQAKSVEVVGWVEDPDTYPMAAKRHSIEYLREVAHLRPRTNLIGAVARVRHCLAQAIHRFFHEQGF 158
BLAST of FC868535 vs. ExPASy Swiss-Prot
Match: SYN_DESDG (Asparaginyl-tRNA synthetase OS=Desulfovibrio desulfuricans (strain G20) GN=asnS PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.250e-20 Identity = 58/139 (41.73%), Postives = 82/139 (58.99%), Query Frame = 3 Query: 273 VRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDV---ADLGQLVPTGTCVYVEGMLKNPPEGTKQKIELRVQKVVDVGMVDPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGF 680 +R+ GWV+T R+ KG F+FLE+NDGSC N+QVIVD++ +G+ TG V + G L P G QK E+R + +G DP +P+ K + + E+LR RPRTN A RIR +YA H+F ++ GF Sbjct: 19 IRICGWVRTRRD-AKG-FSFLELNDGSCLTNIQVIVDEETDAYRSVGEAT-TGASVDIRGQLVESP-GKGQKWEVRAATMTLLGKADPETFPLQKKRHSDEYLRTIAHLRPRTNKFGAAFRIRAEASYAVHSFFRENGF 153
BLAST of FC868535 vs. ExPASy Swiss-Prot
Match: SYN_ACTPJ (Asparaginyl-tRNA synthetase OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=asnS PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.250e-20 Identity = 63/149 (42.28%), Postives = 86/149 (57.72%), Query Frame = 3 Query: 249 GAGLAGQQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQLV---PTGTCVYVEG-MLKNPPEGTKQKIELRVQKVVDVGMV-DPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGF 680 G G++V V GWV+T R+ K +FL V DGSC LQ I++ D+A+ V G V V G ++++P EG Q +EL V VG V DP YP+ + ++E+LR+ RPRTN I AVAR+R+ LA A H F +QGF Sbjct: 13 GKVAVGEEVAVRGWVRTRRDS-KAGLSFLAVYDGSCFDPLQSIINNDLANYNDEVLRLTAGCSVIVTGKVVESPAEG--QAVELHATHVEVVGWVEDPDTYPMAAKRHSIEYLREVAHLRPRTNLIGAVARVRHCLAQAIHRFFNEQGF 158 The following BLAST results are available for this feature:
BLAST of FC868535 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 168
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868535 ID=FC868535; Name=FC868535; organism=Citrus clementina; type=EST; length=683bpback to top |