FC868535
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868535 vs. ExPASy Swiss-Prot
Match: SYN_SALTY (Asparaginyl-tRNA synthetase OS=Salmonella typhimurium GN=asnS PE=3 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 1.366e-18 Identity = 57/142 (40.14%), Postives = 80/142 (56.34%), Query Frame = 3 Query: 267 QQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQLV---PTGTCVYVEGMLKNPPEGTKQKIELRVQKVVDVGMV-DPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGF 680 Q+V V GWV+T R+ K +FL V DGSC +Q +++ + + + V TG V V G + P G Q E++ KV G V DP YP+ + ++E+LR+ RPRTN I AVAR+R+ LA A H F +QGF Sbjct: 18 QEVTVRGWVRTRRDS-KAGISFLAVYDGSCFDPVQAVINNSLPNYNEEVLHLTTGCSVVVTGKVVASP-GQGQSFEIQATKVEVAGWVEDPDTYPMAAKRHSIEYLREVAHLRPRTNLIGAVARVRHTLAQALHRFFDEQGF 157
BLAST of FC868535 vs. ExPASy Swiss-Prot
Match: SYN_SALTI (Asparaginyl-tRNA synthetase OS=Salmonella typhi GN=asnS PE=3 SV=3) HSP 1 Score: 93.2041 bits (230), Expect = 1.366e-18 Identity = 57/142 (40.14%), Postives = 80/142 (56.34%), Query Frame = 3 Query: 267 QQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQLV---PTGTCVYVEGMLKNPPEGTKQKIELRVQKVVDVGMV-DPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGF 680 Q+V V GWV+T R+ K +FL V DGSC +Q +++ + + + V TG V V G + P G Q E++ KV G V DP YP+ + ++E+LR+ RPRTN I AVAR+R+ LA A H F +QGF Sbjct: 18 QEVTVRGWVRTRRDS-KAGISFLAVYDGSCFDPVQAVINNSLPNYNEEVLHLTTGCSVVVTGKVVASP-GQGQSFEIQATKVEVAGWVEDPDTYPMAAKRHSIEYLREVAHLRPRTNLIGAVARVRHTLAQALHRFFDEQGF 157
BLAST of FC868535 vs. ExPASy Swiss-Prot
Match: SYN_SALPA (Asparaginyl-tRNA synthetase OS=Salmonella paratyphi A GN=asnS PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.366e-18 Identity = 57/142 (40.14%), Postives = 80/142 (56.34%), Query Frame = 3 Query: 267 QQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQLV---PTGTCVYVEGMLKNPPEGTKQKIELRVQKVVDVGMV-DPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGF 680 Q+V V GWV+T R+ K +FL V DGSC +Q +++ + + + V TG V V G + P G Q E++ KV G V DP YP+ + ++E+LR+ RPRTN I AVAR+R+ LA A H F +QGF Sbjct: 18 QEVTVRGWVRTRRDS-KAGISFLAVYDGSCFDPVQAVINNSLPNYNEEVLHLTTGCSVVVTGKVVASP-GQGQSFEIQATKVEVAGWVEDPDTYPMAAKRHSIEYLREVAHLRPRTNLIGAVARVRHTLAQALHRFFDEQGF 157
BLAST of FC868535 vs. ExPASy Swiss-Prot
Match: SYN_SALCH (Asparaginyl-tRNA synthetase OS=Salmonella choleraesuis GN=asnS PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.366e-18 Identity = 57/142 (40.14%), Postives = 80/142 (56.34%), Query Frame = 3 Query: 267 QQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQLV---PTGTCVYVEGMLKNPPEGTKQKIELRVQKVVDVGMV-DPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGF 680 Q+V V GWV+T R+ K +FL V DGSC +Q +++ + + + V TG V V G + P G Q E++ KV G V DP YP+ + ++E+LR+ RPRTN I AVAR+R+ LA A H F +QGF Sbjct: 18 QEVTVRGWVRTRRDS-KAGISFLAVYDGSCFDPVQAVINNSLPNYNEEVLHLTTGCSVVVTGKVVASP-GQGQSFEIQATKVEVAGWVEDPDTYPMAAKRHSIEYLREVAHLRPRTNLIGAVARVRHTLAQALHRFFDEQGF 157
BLAST of FC868535 vs. ExPASy Swiss-Prot
Match: SYN_CLOTE (Asparaginyl-tRNA synthetase OS=Clostridium tetani GN=asnS PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.366e-18 Identity = 56/160 (35.00%), Postives = 89/160 (55.62%), Query Frame = 3 Query: 210 RVLIKSILTRPDGGAGLAGQQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQL--VPTGTCVYVEGMLKNPPEGTKQKIELRVQKVVDVGMVDPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFL 683 ++ IK + P+ + + V GW++T E+ +F F+E+NDGS NLQ+I+D ++ + ++ +P + + VEG L P KQ E++ KV G YP+ K + + EFLR RPR+NT +AV RIR+ AYA H F Q++ F+ Sbjct: 3 KISIKQLYREPEK---FINKDIVVAGWIRT--ERTSKNFGFIELNDGSFFKNLQIIIDTNLDNFDKVSKLPISSSIVVEGKLVATPSA-KQPFEVQASKVTVEG-TSLQDYPLQKKRHSFEFLRSIAHLRPRSNTFSAVFRIRSLAAYAVHKFFQEKNFV 155
BLAST of FC868535 vs. ExPASy Swiss-Prot
Match: SYN_BACCR (Asparaginyl-tRNA synthetase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=asnS PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.783e-18 Identity = 51/143 (35.66%), Postives = 86/143 (60.14%), Query Frame = 3 Query: 261 AGQQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQL--VPTGTCVYVEGMLKNPPEGTKQKIELRVQKVVDVGMVDPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFL 683 A Q V+V GW++ R+ +F F+E+NDGS ++Q++ D ++ + ++ +P + V VEG + P G KQ E++ +K+ G+ D + YP+ K + T E+LR RPRTN +A R+R+ A+A H F Q++GF+ Sbjct: 17 ADQTVQVSGWIRNLRDSK--AFGFIELNDGSFFKSVQIVFDTELENFKEIAKLPLSSSVKVEGKVIATP-GAKQPFEIKAEKIDIEGLSD-SDYPLQKKRHTFEYLRTIAHLRPRTNAFSATFRVRSIAAFAIHQFFQERGFV 155
BLAST of FC868535 vs. ExPASy Swiss-Prot
Match: SYN_SHEFN (Asparaginyl-tRNA synthetase OS=Shewanella frigidimarina (strain NCIMB 400) GN=asnS PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.329e-18 Identity = 58/149 (38.93%), Postives = 81/149 (54.36%), Query Frame = 3 Query: 249 GAGLAGQQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQLV---PTGTCVYVEGMLKNPPEGTKQKIELRVQKVVDVGMVD-PAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFL 683 G G QV V GWV+T R+ K +FL V DGSC +Q ++ +A+ V G V + G + P G Q EL+V ++V G VD P YP+ + ++E LR+ RPRTN I AVAR+RN L+ A H F ++GF+ Sbjct: 12 GEHAVGSQVTVRGWVRTRRDS-KAGISFLAVYDGSCFDPIQGVLPNSLANYNDDVLKLTAGCSVVMTGEVVASP-GAGQAFELQVTEIVVTGFVDDPDTYPMSAKRHSIEHLRELAHLRPRTNIIGAVARVRNCLSQAIHRFYHQEGFI 158
BLAST of FC868535 vs. ExPASy Swiss-Prot
Match: SYN_SHELP (Asparaginyl-tRNA synthetase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=asnS PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.042e-18 Identity = 57/144 (39.58%), Postives = 79/144 (54.86%), Query Frame = 3 Query: 264 GQQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQLV---PTGTCVYVEGMLKNPPEGTKQKIELRVQKVVDVGMV-DPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFL 683 G QV V GWV+T R+ K +FL V DGSC +Q +V + + + G V + G L P G Q E++V KV G V DP YP+ + ++E LR+ RPRTN I AVAR+RN L++A H F ++GF+ Sbjct: 17 GSQVTVRGWVRTRRDS-KAGISFLAVYDGSCFDPIQGVVPNSLDNYNDEILRLTAGCSVVMTGELVESP-GKGQAFEMQVTKVEVTGWVEDPDTYPMAAKRHSIEHLRELAHLRPRTNIIGAVARVRNCLSHAIHNFYNEEGFI 158
BLAST of FC868535 vs. ExPASy Swiss-Prot
Match: SYN_BACFR (Asparaginyl-tRNA synthetase OS=Bacteroides fragilis GN=asnS PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.042e-18 Identity = 62/159 (38.99%), Postives = 86/159 (54.09%), Query Frame = 3 Query: 210 RVLIKSILTRPDGGAGLAGQQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQL--VPTGTCVYVEGMLKNPPEGTKQKIELRVQKVVDVGMVDPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGF 680 R I ++ R D GA V V GWV+T R G F+ +NDGS N+QV+VD D L + TG C+ V G+L G QK E++ +++ +G D YP+ K ++EFLR+ RPRTNT AV RIR+ +A A H F ++GF Sbjct: 6 RTKIVDLMKREDFGA-----MVNVKGWVRTRR--GSKQVNFIALNDGSTINNVQVVVDLANFDEEMLKQITTGACLSVNGVLTESV-GAGQKAEVQAREIEVLGTCDNT-YPLQKKGHSMEFLREIAHLRPRTNTFGAVFRIRHNMAIAIHKFFHEKGF 155
BLAST of FC868535 vs. ExPASy Swiss-Prot
Match: SYN_BACFN (Asparaginyl-tRNA synthetase OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=asnS PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.042e-18 Identity = 62/159 (38.99%), Postives = 86/159 (54.09%), Query Frame = 3 Query: 210 RVLIKSILTRPDGGAGLAGQQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQL--VPTGTCVYVEGMLKNPPEGTKQKIELRVQKVVDVGMVDPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGF 680 R I ++ R D GA V V GWV+T R G F+ +NDGS N+QV+VD D L + TG C+ V G+L G QK E++ +++ +G D YP+ K ++EFLR+ RPRTNT AV RIR+ +A A H F ++GF Sbjct: 6 RTKIVDLMKREDFGA-----MVNVKGWVRTRR--GSKQVNFIALNDGSTINNVQVVVDLANFDEEMLKQITTGACLSVNGVLTESV-GAGQKAEVQAREIEVLGTCDNT-YPLQKKGHSMEFLREIAHLRPRTNTFGAVFRIRHNMAIAIHKFFHEKGF 155 The following BLAST results are available for this feature:
BLAST of FC868535 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 168
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868535 ID=FC868535; Name=FC868535; organism=Citrus clementina; type=EST; length=683bpback to top |