FC868537

Overview
NameFC868537
Unique NameFC868537
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length658
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_DESPS (Anthranilate phosphoribosyltransferase OS=Desulfotalea psychrophila GN=trpD PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.236e-23
Identity = 66/145 (45.52%), Postives = 88/145 (60.69%), Query Frame = 1
Query:  235 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE-GLGD---AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFM 654
            +++  DL+E+E  AS++ +++ +A  A I++F+  LR KGE   EIVG  R M   AT ++ GLG     +DIVGTGGDGA+T N+ST  S + AA G  VAK             DVLEALGV + LDP  V R V E GIGF+
Sbjct:   19 VVTGADLSESEMMASMEEVMSGQASPAQIASFITALRMKGEAVEEIVGAVRVMRDKATFIDCGLGPDDILMDIVGTGGDGADTFNVSTTTSFVVAAAGVAVAKHGNRAVSSRCGSADVLEALGVDLSLDPATVARSVQEIGIGFL 163          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD1_STRCO (Anthranilate phosphoribosyltransferase 1 OS=Streptomyces coelicolor GN=trpD1 PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.236e-23
Identity = 69/160 (43.12%), Postives = 92/160 (57.50%), Query Frame = 1
Query:  175 PAVSDNTRPQTPCFNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGF 651
            PA  D T  ++  +  L++ L+   DL+  +   +LD ++  EA +  I+ F V LR KGET  EI GL R M ++A  +E  G  VDIVGTGGDGA TVNIST ++I+ A  GAKV K             DVLE LGV ++L P+ V    +EAGI F
Sbjct:    6 PAGGDTTADRS--WPALLNGLLDGRDLSADDTAWALDVIMRGEATDVQIAGFAVGLRFKGETVEEISGLVRTMYEHANVIEVPGKTVDIVGTGGDGAKTVNISTMSAIVLAGTGAKVVKHGNRAASSASGASDVLEKLGVNLELTPQRVAEVAEEAGITF 163          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_XANP2 (Anthranilate phosphoribosyltransferase OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=trpD PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 3.814e-23
Identity = 64/148 (43.24%), Postives = 81/148 (54.73%), Query Frame = 1
Query:  214 FNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFM 654
            F  L+  + +   LT  EA    D +++ EA  + + A L+ LR +GET  EI G    M      VE   +AVD+VGTGGD + + NIST AS + A  G  VAK             DVL ALGV IDLDP G+ RC+ EAGIGFM
Sbjct:    4 FKPLLGKVATGASLTRDEAAYVFDKMMSGEATPSQMGALLMGLRVRGETVEEIAGAVSVMRSKMLSVEAPSEAVDVVGTGGDASGSYNISTCASFIVAGAGVPVAKHGNRALSSKSGAADVLAALGVRIDLDPAGISRCIAEAGIGFM 151          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_GEOSL (Anthranilate phosphoribosyltransferase OS=Geobacter sulfurreducens GN=trpD PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 3.814e-23
Identity = 66/156 (42.31%), Postives = 89/156 (57.05%), Query Frame = 1
Query:  235 LISRVDLTEAEAQASLDYLLNE-ADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKV---EGLGDA------------VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFM 654
            ++ R+DLTEAE    +D +++  A  A I+AF+  LR KGET  EI G AR M   AT +   +G+ D             +D+VGTGGDG NT NIST  S + A+CG KVAK             DVLE+LGV +D+ PE V + + + GIGF+
Sbjct:    9 VVERIDLTEAEMIEVMDQIMSGGATPAQIAAFITALRMKGETVEEITGAARVMRDRATPIRVGKGVLDIDRDDINIDQETILDVVGTGGDGTNTFNISTTVSFVVASCGVKVAKHGNRAVSSACGSADVLESLGVNLDVTPETVEQAIAKIGIGFL 164          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_METRJ (Anthranilate phosphoribosyltransferase OS=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) GN=trpD PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 4.981e-23
Identity = 63/135 (46.67%), Postives = 81/135 (60.00%), Query Frame = 1
Query:  253 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFM 654
            L  AEA+A+ D LL+ E       AFL  L+ +GE+  EIVG A AM    T+V    +AVD+VGTGGD + +VN+ST A+I+ AACG  VAK             DVL ALGV + LDP    RC+DEAG+ F+
Sbjct:   17 LDRAEARAAFDDLLSGEVTPVQAGAFLTALKVRGESVEEIVGAAEAMRARMTRVAAPENAVDVVGTGGDHSGSVNVSTLAAIVVAACGVPVAKHGNRAATSRSGAADVLAALGVRLGLDPAAQARCLDEAGLCFL 151          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_CLOK5 (Anthranilate phosphoribosyltransferase OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=trpD PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 4.981e-23
Identity = 60/148 (40.54%), Postives = 89/148 (60.14%), Query Frame = 1
Query:  217 NELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGD-AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFM 654
            NE I  ++S  DL+E++++  ++ ++N +   ALI+ FL+ L+ KGE+  EI G A+AM   A  V+     A+D  GTGGDG  T NIST A+I+AA+ G KVAK             DVL+ LG+ I+L+   V  C+D  G+GF+
Sbjct:    3 NEAIKEVLSGKDLSESQSEQVMENIMNGQESSALIAGFLIALKMKGESIPEITGCAKAMRNMAVPVKLKSQYAIDTCGTGGDGGRTFNISTAAAIIAASAGVKVAKHGNRAVSSQSGSADVLKELGININLEKSKVEHCIDNVGMGFL 150          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_CLOK1 (Anthranilate phosphoribosyltransferase OS=Clostridium kluyveri (strain NBRC 12016) GN=trpD PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 4.981e-23
Identity = 60/148 (40.54%), Postives = 89/148 (60.14%), Query Frame = 1
Query:  217 NELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGD-AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFM 654
            NE I  ++S  DL+E++++  ++ ++N +   ALI+ FL+ L+ KGE+  EI G A+AM   A  V+     A+D  GTGGDG  T NIST A+I+AA+ G KVAK             DVL+ LG+ I+L+   V  C+D  G+GF+
Sbjct:    3 NEAIKEVLSGKDLSESQSEQVMENIMNGQESSALIAGFLIALKMKGESIPEITGCAKAMRNMAVPVKLKSQYAIDTCGTGGDGGRTFNISTAAAIIAASAGVKVAKHGNRAVSSQSGSADVLKELGININLEKSKVEHCIDNVGMGFL 150          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_THEFY (Anthranilate phosphoribosyltransferase OS=Thermobifida fusca (strain YX) GN=trpD PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 6.506e-23
Identity = 60/147 (40.82%), Postives = 89/147 (60.54%), Query Frame = 1
Query:  214 FNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGF 651
            ++ LI  L++   LT  + + +++ +++  A +A I+ F + LRAKGE+  E+ GLA+ M+ +A  +   G  +DIVGTGGD A+TVN+ST ASI+A+A GA+V K             DVLE LGV+IDLDP       +E  I F
Sbjct:    6 WSHLISALLNGTSLTADDTKWAMNEIMSGSATDAQIAGFAIALRAKGESVAEVRGLAQGMLDHAVTISVPGATLDIVGTGGDRAHTVNVSTMASIVASAAGARVVKHGNRAASSSCGTADVLERLGVIIDLDPADAVAVAEEVDITF 152          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_RHIEC (Anthranilate phosphoribosyltransferase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=trpD PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 6.506e-23
Identity = 62/139 (44.60%), Postives = 80/139 (57.55%), Query Frame = 1
Query:  241 SRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFM 654
            SR  LT  EA+A+ D L++ +A  + I  FL+ LR +GE+  EIVG    M      VE   DA+DIVGTGGD + T NIST A+++ A  G  VAK             D L ALGV ID+ PE + RC+ EA +GFM
Sbjct:   13 SREPLTRDEARAAFDILMSGQATPSQIGGFLMALRVRGESVDEIVGAVTTMRSKMLTVEAPADAIDIVGTGGDASGTYNISTLAALIVAGAGVPVAKHGNRALSSKSGAADNLSALGVNIDVGPEIISRCIAEASVGFM 151          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_RHIE6 (Anthranilate phosphoribosyltransferase OS=Rhizobium etli (strain CIAT 652) GN=trpD PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 6.506e-23
Identity = 62/139 (44.60%), Postives = 80/139 (57.55%), Query Frame = 1
Query:  241 SRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFM 654
            SR  LT  EA+A+ D L++ +A  + I  FL+ LR +GE+  EIVG    M      VE   DA+DIVGTGGD + T NIST A+++ A  G  VAK             D L ALGV ID+ PE + RC+ EA +GFM
Sbjct:   13 SREPLTRDEARAAFDILMSGQATPSQIGGFLMALRVRGESVDEIVGAVTTMRSKMLTVEAPADAIDIVGTGGDASGTYNISTLAALIVAGAGVPVAKHGNRALSSKSGAADNLSALGVNIDVGPEIISRCIAEASVGFM 151          
The following BLAST results are available for this feature:
BLAST of FC868537 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_DESPS2.236e-2345.52Anthranilate phosphoribosyltransferase OS=Desulfot... [more]
TRPD1_STRCO2.236e-2343.13Anthranilate phosphoribosyltransferase 1 OS=Strept... [more]
TRPD_XANP23.814e-2343.24Anthranilate phosphoribosyltransferase OS=Xanthoba... [more]
TRPD_GEOSL3.814e-2342.31Anthranilate phosphoribosyltransferase OS=Geobacte... [more]
TRPD_METRJ4.981e-2346.67Anthranilate phosphoribosyltransferase OS=Methylob... [more]
TRPD_CLOK54.981e-2340.54Anthranilate phosphoribosyltransferase OS=Clostrid... [more]
TRPD_CLOK14.981e-2340.54Anthranilate phosphoribosyltransferase OS=Clostrid... [more]
TRPD_THEFY6.506e-2340.82Anthranilate phosphoribosyltransferase OS=Thermobi... [more]
TRPD_RHIEC6.506e-2344.60Anthranilate phosphoribosyltransferase OS=Rhizobiu... [more]
TRPD_RHIE66.506e-2344.60Anthranilate phosphoribosyltransferase OS=Rhizobiu... [more]

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Properties
Property NameValue
Genbank descriptionC31001F06EF AbioticL1 Citrus clementina cDNA clone C31001F06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868537 ID=FC868537; Name=FC868537; organism=Citrus clementina; type=EST; length=658bp
GGCAACACAATGACAATGAGAGCGTTGTTGAATTTAACTGCAGTTTCTTC
CTCTCCATTTAATAATAATCACCCAAATCACCGGCCTTCCTTACCGTCGC
TTCGAAACTGTGGATTTACGACTGCGGGTAGTAATCCGAGATGCAGAGAA
TTAACTGCTATTCAAACCCCTCAGCCGGCTGTTTCTGATAATACTCGCCC
TCAAACGCCCTGCTTTAATGAGTTGATCGATTGCTTGATAAGTCGAGTGG
ATTTAACGGAGGCGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAATGAA
GCTGATGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCTCAGAGCCAAAGG
AGAAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGATGATAAAGTATG
CTACGAAGGTGGAAGGGCTGGGTGATGCAGTTGACATTGTGGGTACAGGA
GGTGATGGTGCAAACACAGTGAACATTTCAACTGGTGCTTCAATTCTTGC
TGCAGCTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTCGGTCTAGTTCTT
CTGCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGTGTCGTTATTGAC
TTGGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGCAGGAATTGGTTT
CATGATGT
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