FC868560
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868560 vs. ExPASy Swiss-Prot
Match: TDH_XANC5 (L-threonine 3-dehydrogenase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=tdh PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.422e-26 Identity = 66/206 (32.04%), Postives = 108/206 (52.43%), Query Frame = 1 Query: 79 EVNMAAWLMGVNTLKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLGARAFGAPRIVIVDVDDYRLSV 696 E N WL + + +P+ GP +VL++++ +CG+D+H + ++ + IGHE G + ++GS V G RV+ E I C C C+GGR +LCP + G+G V+G A +V PA + +PD + E A +P H ++ E +VLI G+GPIG++ + GA +V+ DV+D+RL + Sbjct: 8 EANKGIWL--------EQVPVPTPGPNEVLIKLEKTAICGTDLHIYLWDEWSQRTIRPGLTIGHEFVGRVAELGSAVTGYQVGQRVSAEGHIVCGHCRNCRGGRPHLCPNTVGIG-VNVNGAFAEYMVMPASNLWLIPDQIPSELAAFFDPYGNAAHCALEFDVIGE-DVLITGAGPIGIIAAGICKHIGARNVVVTDVNDFRLKL 203
BLAST of FC868560 vs. ExPASy Swiss-Prot
Match: TDH_THET8 (L-threonine 3-dehydrogenase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=tdh PE=1 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.422e-26 Identity = 69/185 (37.30%), Postives = 103/185 (55.68%), Query Frame = 1 Query: 139 LPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLGARAFGAPRIVIVDVDDYRLS 693 +P GP ++LVR++A +CG+D+H K A ++ P+V GHE +GV+E VG V+ GD V+LE I C C C+ G Y++C ++ LG G A VV PA+ + P ++ E A+ EP VH + +VLI G+GPIGL+ + RA GA I++ D + YRL+ Sbjct: 20 VPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVGPGVRRPQVGDHVSLESHIVCHACPACRTGNYHVCLNTQILGVDR-DGGFAEYVVVPAENAWVNPKDLPFEVAAILEPFGNAVHTVYAGSGVSGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLA 203
BLAST of FC868560 vs. ExPASy Swiss-Prot
Match: TDH_BURCM (L-threonine 3-dehydrogenase OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=tdh PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.422e-26 Identity = 67/193 (34.72%), Postives = 105/193 (54.40%), Query Frame = 1 Query: 118 LKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLGARAFGAPRIVIVDVDDYRLSV 696 L + ++ P +G DVL+++ +CG+D+H K A + PM +GHE G I ++G EV+ GDRV+ E I+C C C+ GR +LC + G+G G A + PA FK+P +S + ++ +P H N+ E +VLI G+GPIG++ A+ GA +VI D++DYRL + Sbjct: 13 LTLTRVKRPEVGHNDVLIKIHRTAICGTDIHIWKWDDWAQKTIPVPMHVGHEYVGEIVEMGQEVRGFAIGDRVSGEGHITCGFCRNCRAGRRHLCRNTVGVGVNR-EGAFAEYLAIPAFNAFKIPPEISDDLASIFDPFGNATHTALSFNLVGE-DVLITGAGPIGVMAAAIAKHVGARNVVITDINDYRLEL 203
BLAST of FC868560 vs. ExPASy Swiss-Prot
Match: TDH_BURA4 (L-threonine 3-dehydrogenase OS=Burkholderia ambifaria (strain MC40-6) GN=tdh PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.422e-26 Identity = 67/193 (34.72%), Postives = 105/193 (54.40%), Query Frame = 1 Query: 118 LKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLGARAFGAPRIVIVDVDDYRLSV 696 L + ++ P +G DVL+++ +CG+D+H K A + PM +GHE G I ++G EV+ GDRV+ E I+C C C+ GR +LC + G+G G A + PA FK+P +S + ++ +P H N+ E +VLI G+GPIG++ A+ GA +VI D++DYRL + Sbjct: 13 LTLTRVKRPEVGHNDVLIKIHRTAICGTDIHIWKWDDWAQKTIPVPMHVGHEYVGEIVEMGQEVRGFAIGDRVSGEGHITCGFCRNCRAGRRHLCRNTVGVGVNR-EGAFAEYLAIPAFNAFKIPPEISDDLASIFDPFGNATHTALSFNLVGE-DVLITGAGPIGVMAAAIAKHVGARNVVITDINDYRLEL 203
BLAST of FC868560 vs. ExPASy Swiss-Prot
Match: TDH_XANAC (L-threonine 3-dehydrogenase OS=Xanthomonas axonopodis pv. citri GN=tdh PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.857e-26 Identity = 66/206 (32.04%), Postives = 108/206 (52.43%), Query Frame = 1 Query: 79 EVNMAAWLMGVNTLKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLGARAFGAPRIVIVDVDDYRLSV 696 E N WL + + +P+ GP +VL++++ +CG+D+H + ++ + IGHE G + ++GS V G RV+ E I C C C+GGR +LCP + G+G V+G A +V PA + +PD + E A +P H ++ E +VLI G+GPIG++ + GA +V+ DV+D+RL + Sbjct: 8 EANKGIWL--------EQVPVPTPGPNEVLIKLEKTAICGTDLHIYLWDEWSQRTIEPGLTIGHEFVGRVAELGSAVTGYQIGQRVSAEGHIVCGHCRNCRGGRPHLCPNTVGIG-VNVNGAFAEYMVMPASNLWPIPDQIPSELAAFFDPYGNAAHCALEFDVIGE-DVLITGAGPIGIIAAGICKHIGARNVVVTDVNDFRLKL 203
BLAST of FC868560 vs. ExPASy Swiss-Prot
Match: TDH_XANCP (L-threonine 3-dehydrogenase OS=Xanthomonas campestris pv. campestris GN=tdh PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.404e-26 Identity = 62/191 (32.46%), Postives = 104/191 (54.45%), Query Frame = 1 Query: 124 IQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLGARAFGAPRIVIVDVDDYRLSV 696 ++ + +P+ GP +VL++++ +CG+D+H + + + IGHE G + ++GS V G RV+ E I C C C+GGR +LCP + G+G V+G A +V PA + +PD + E A +P H ++ E +VLI G+GPIG++ + GA +V+ DV+D+RL + Sbjct: 15 LEQVPVPTPGPNEVLIKLEKTAICGTDLHIYLWDEWSQRTITPGLTIGHEFVGRVAELGSAVTGYQVGQRVSAEGHIVCGHCRNCRGGRPHLCPNTVGIG-VNVNGAFAEYMVMPASNLWPIPDQIPSELAAFFDPYGNAAHCALEFDVIGE-DVLITGAGPIGIIAAGICKHIGARNVVVTDVNDFRLKL 203
BLAST of FC868560 vs. ExPASy Swiss-Prot
Match: TDH_XANCB (L-threonine 3-dehydrogenase OS=Xanthomonas campestris pv. campestris (strain B100) GN=tdh PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.404e-26 Identity = 62/191 (32.46%), Postives = 104/191 (54.45%), Query Frame = 1 Query: 124 IQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLGARAFGAPRIVIVDVDDYRLSV 696 ++ + +P+ GP +VL++++ +CG+D+H + + + IGHE G + ++GS V G RV+ E I C C C+GGR +LCP + G+G V+G A +V PA + +PD + E A +P H ++ E +VLI G+GPIG++ + GA +V+ DV+D+RL + Sbjct: 15 LEQVPVPTPGPNEVLIKLEKTAICGTDLHIYLWDEWSQRTITPGLTIGHEFVGRVAELGSAVTGYQVGQRVSAEGHIVCGHCRNCRGGRPHLCPNTVGIG-VNVNGAFAEYMVMPASNLWPIPDQIPSELAAFFDPYGNAAHCALEFDVIGE-DVLITGAGPIGIIAAGICKHIGARNVVVTDVNDFRLKL 203
BLAST of FC868560 vs. ExPASy Swiss-Prot
Match: TDH_XANC8 (L-threonine 3-dehydrogenase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=tdh PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.404e-26 Identity = 62/191 (32.46%), Postives = 104/191 (54.45%), Query Frame = 1 Query: 124 IQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLGARAFGAPRIVIVDVDDYRLSV 696 ++ + +P+ GP +VL++++ +CG+D+H + + + IGHE G + ++GS V G RV+ E I C C C+GGR +LCP + G+G V+G A +V PA + +PD + E A +P H ++ E +VLI G+GPIG++ + GA +V+ DV+D+RL + Sbjct: 15 LEQVPVPTPGPNEVLIKLEKTAICGTDLHIYLWDEWSQRTITPGLTIGHEFVGRVAELGSAVTGYQVGQRVSAEGHIVCGHCRNCRGGRPHLCPNTVGIG-VNVNGAFAEYMVMPASNLWPIPDQIPSELAAFFDPYGNAAHCALEFDVIGE-DVLITGAGPIGIIAAGICKHIGARNVVVTDVNDFRLKL 203
BLAST of FC868560 vs. ExPASy Swiss-Prot
Match: TDH_SHEFN (L-threonine 3-dehydrogenase OS=Shewanella frigidimarina (strain NCIMB 400) GN=tdh PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.404e-26 Identity = 64/185 (34.59%), Postives = 101/185 (54.59%), Query Frame = 1 Query: 142 PSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLGARAFGAPRIVIVDVDDYRLSV 696 P +G D+L++++ +CG+DVH + + PM+ GHE G + VG EV+ GDRV+ E I+C C C+ GR +LC + G+G G A +V PA FK+P ++ + A+ +P VH ++ E +VLI G+GPIG++ + GA +VI DV++YRL + Sbjct: 21 PEMGHNDLLIKIRKTAICGTDVHIYNWDEWSQKTIPVPMIAGHEYVGEVVDVGQEVRGFSIGDRVSGEGHITCGHCRNCRAGRTHLCRNTSGVGVNR-DGAFAEYLVLPAFNAFKIPADIPDDLAAIFDPFGNAVHTALSFDLVGE-DVLITGAGPIGIMAAAVCKHVGARHVVITDVNEYRLDL 203
BLAST of FC868560 vs. ExPASy Swiss-Prot
Match: TDH_RHILW (L-threonine 3-dehydrogenase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=tdh PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.404e-26 Identity = 67/194 (34.54%), Postives = 112/194 (57.73%), Query Frame = 1 Query: 118 LKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLG-SPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLGARAFGAPRIVIVDVDDYRLSV 696 L ++ + +P +GP DVL+R++ +CG+DVH + A + PMV+GHE +G I ++GS V G+RV+ E I C +C C+ GR +LC + G+G + P G V P +P+++S E A+ +P VH ++ E +VL+ G+GPIG++ L A+ GA ++VI D++ +RL++ Sbjct: 17 LWMENVPVPEVGPNDVLIRVRKSAICGTDVHIWNWDQWAQKTIPVPMVVGHEFSGEIAEIGSAVTRYHVGERVSGEGHIVCGKCRNCRAGRGHLCRNTLGVGVNRP--GSFGEFVCIPESNVVAIPEDISDEIAAIFDPFGNAVHTALSFDLVGE-DVLVTGAGPIGIMGALVAKRSGARKVVITDINPHRLAL 207 The following BLAST results are available for this feature:
BLAST of FC868560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 320
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC868560 ID=FC868560; Name=FC868560; organism=Citrus clementina; type=EST; length=697bpback to top |