FC868588
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868588 vs. ExPASy Swiss-Prot
Match: NDRG1_XENTR (Protein NDRG1 OS=Xenopus tropicalis GN=ndrg1 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 6.102e-20 Identity = 57/182 (31.32%), Postives = 99/182 (54.40%), Query Frame = 2 Query: 131 IKTSHGSLSVTIYGDQ--DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSR-XVRGNAQVPES 667 I+T+HG + VT+ G ++P ++TY D+ LN+ +CF LF + + H F + H++ PG + GAA+ S+D LA+ + V+ GL +V+ +G+ AGAYILT FA+ + V GL+L++ A W +W K+ G + ++++ FS+ V N ++ E+ Sbjct: 37 IETAHGIVHVTMCGTPKLNRPVILTYHDIGLNHKTCFNSLFNFEDMHEITQH-FSVCHVDAPGQQEGAASFPAGYMYPSMDQLAEMLPGVIQQLGLKSVLGLGIGAGAYILTRFALNHPSMVEGLVLININPCAEGWMDWAATKIS-------GWTHALPDMVISHLFSKDEVHSNHELVET 210
BLAST of FC868588 vs. ExPASy Swiss-Prot
Match: NDRG1_MACFA (Protein NDRG1 OS=Macaca fascicularis GN=Ndrg1 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 6.102e-20 Identity = 52/145 (35.86%), Postives = 84/145 (57.93%), Query Frame = 2 Query: 131 IKTSHGSLSVTIYGDQ--DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKV 559 I+T HGS+ VT+ G ++P ++TY D+ +N+ +C+ LF + + H F + H++ PG + GAA+ S+D LA+ + VL FGL +++ MG AGAYILT FA+ V GL+L++ A W +W +K+ Sbjct: 37 IETLHGSVHVTLCGTPKGNRPVILTYHDIGMNHKTCYNPLFNYEDMQEITQH-FAVCHVDAPGQQDGAASFPAGYMYPSMDQLAEMLPGVLQQFGLKSIIGMGTGAGAYILTRFALNNPEMVEGLVLINVNPCAEGWMDWAASKI 180
BLAST of FC868588 vs. ExPASy Swiss-Prot
Match: NDRG1_HUMAN (Protein NDRG1 OS=Homo sapiens GN=NDRG1 PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 6.102e-20 Identity = 52/145 (35.86%), Postives = 84/145 (57.93%), Query Frame = 2 Query: 131 IKTSHGSLSVTIYGDQ--DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKV 559 I+T HGS+ VT+ G ++P ++TY D+ +N+ +C+ LF + + H F + H++ PG + GAA+ S+D LA+ + VL FGL +++ MG AGAYILT FA+ V GL+L++ A W +W +K+ Sbjct: 37 IETLHGSVHVTLCGTPKGNRPVILTYHDIGMNHKTCYNPLFNYEDMQEITQH-FAVCHVDAPGQQDGAASFPAGYMYPSMDQLAEMLPGVLQQFGLKSIIGMGTGAGAYILTRFALNNPEMVEGLVLINVNPCAEGWMDWAASKI 180
BLAST of FC868588 vs. ExPASy Swiss-Prot
Match: NDRG3_BOVIN (Protein NDRG3 OS=Bos taurus GN=NDRG3 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.969e-20 Identity = 55/170 (32.35%), Postives = 95/170 (55.88%), Query Frame = 2 Query: 131 IKTSHGSLSVTIYG--DQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSR 634 I+T+HG + VTI G ++P ++TY D+ LN+ SCF FF E + +F + H++ PG + GA + ++D+LA+ + VL H L +++ +GV AGAYIL+ FA+ + V GL+L++ A W +W +K+ G+ V +++L +F + Sbjct: 35 IETAHGMVHVTIRGLPKGNRPVILTYHDIGLNHKSCFNA-FFNFEDMQEITQHFAVCHVDAPGQQEGAPSFPTGYQYPTMDELAEMLPPVLTHLNLKSIIGIGVGAGAYILSRFALNHPELVEGLVLINVDPCAKGWIDWAASKLS-------GLTTNVVDIILSHHFGQ 196
BLAST of FC868588 vs. ExPASy Swiss-Prot
Match: NDR1B_XENLA (Protein NDRG1-B OS=Xenopus laevis GN=ndrg1-B PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.969e-20 Identity = 56/182 (30.77%), Postives = 99/182 (54.40%), Query Frame = 2 Query: 131 IKTSHGSLSVTIYGDQ--DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSR-XVRGNAQVPES 667 I+T+HG + VT+ G ++P ++TY D+ LN+ +CF LF + + H F + H++ PG + GAA+ S+D LA+ + V+ GL +++ +G+ +GAYILT FA+ + V GL+L++ A W +W K+ G + E+++ FS+ V N ++ E+ Sbjct: 38 IETAHGIVHVTMCGTPKLNRPVILTYHDIGLNHKTCFNSLFNFEDMHEITQH-FSVCHVDAPGQQEGAASFPAGYMYPSMDQLAEMLPGVVQQLGLKSIIGLGIGSGAYILTRFALNHPSMVEGLVLININPCAEGWMDWAATKIS-------GWAHALPEMVISHLFSKDEVHSNPELVET 211
BLAST of FC868588 vs. ExPASy Swiss-Prot
Match: NDRG3_PONAB (Protein NDRG3 OS=Pongo abelii GN=NDRG3 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.041e-19 Identity = 55/170 (32.35%), Postives = 95/170 (55.88%), Query Frame = 2 Query: 131 IKTSHGSLSVTIYG--DQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSR 634 I+T+HG + VTI G ++P ++TY D+ LN+ SCF FF E + +F + H++ PG + GA + ++D+LA+ + VL H L +++ +GV AGAYIL+ FA+ + V GL+L++ A W +W +K+ G+ V +++L +F + Sbjct: 35 IETTHGMVHVTIRGLPKGNRPVILTYHDIGLNHKSCFNA-FFNFEDMQEITQHFAVCHVDAPGQQEGAPSFPTGYQYPTMDELAEMLPPVLTHLSLKSIIGIGVGAGAYILSRFALNHPELVEGLVLINVDPCAKGWIDWAASKLS-------GLTTNVVDIILAHHFGQ 196
BLAST of FC868588 vs. ExPASy Swiss-Prot
Match: NDRG1_MOUSE (Protein NDRG1 OS=Mus musculus GN=Ndrg1 PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.041e-19 Identity = 53/145 (36.55%), Postives = 84/145 (57.93%), Query Frame = 2 Query: 131 IKTSHGSLSVTIYGDQ--DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKV 559 I+T HGSL VT+ G ++P ++TY D+ +N+ +C+ LF + + H F + H++ PG + GA + S+D LA+ + VL+ FGL +V+ MG AGAYILT FA+ V GL+L++ A W +W +K+ Sbjct: 37 IETLHGSLHVTLCGTPKGNRPVILTYHDIGMNHKTCYNPLFNSEDMQEITQH-FAVCHVDAPGQQDGAPSFPVGYMYPSMDQLAEMLPGVLHQFGLKSVIGMGTGAGAYILTRFALNNPEMVEGLVLMNVNPCAEGWMDWAASKI 180
BLAST of FC868588 vs. ExPASy Swiss-Prot
Match: NDRG3_HUMAN (Protein NDRG3 OS=Homo sapiens GN=NDRG3 PE=1 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 1.359e-19 Identity = 55/170 (32.35%), Postives = 95/170 (55.88%), Query Frame = 2 Query: 131 IKTSHGSLSVTIYG--DQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSR 634 I+T+HG + VTI G ++P ++TY D+ LN+ SCF FF E + +F + H++ PG + GA + ++D+LA+ + VL H L +++ +GV AGAYIL+ FA+ + V GL+L++ A W +W +K+ G+ V +++L +F + Sbjct: 35 IETTHGVVHVTIRGLPKGNRPVILTYHDIGLNHKSCFNA-FFNFEDMQEITQHFAVCHVDAPGQQEGAPSFPTGYQYPTMDELAEMLPPVLTHLSLKSIIGIGVGAGAYILSRFALNHPELVEGLVLINVDPCAKGWIDWAASKLS-------GLTTNVVDIILAHHFGQ 196
BLAST of FC868588 vs. ExPASy Swiss-Prot
Match: NDRG1_RAT (Protein NDRG1 OS=Rattus norvegicus GN=Ndrg1 PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.359e-19 Identity = 53/145 (36.55%), Postives = 84/145 (57.93%), Query Frame = 2 Query: 131 IKTSHGSLSVTIYGDQ--DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKV 559 I+T HGSL VT+ G ++P ++TY D+ +N+ +C+ LF + + H F + H++ PG + GA + S+D LA+ + VL+ FGL +V+ MG AGAYILT FA+ V GL+L++ A W +W +K+ Sbjct: 37 IETLHGSLHVTLCGTPKGNRPVILTYHDIGMNHKTCYNPLFNSEDMQEITQH-FAVCHVDAPGQQDGAPSFPVGYMYPSMDQLAEMLPGVLHKFGLKSVIGMGTGAGAYILTRFALNNPEMVEGLVLMNVNPCAEGWMDWAASKI 180
BLAST of FC868588 vs. ExPASy Swiss-Prot
Match: NDR4A_XENLA (Protein NDRG4-A OS=Xenopus laevis GN=ndrg4-A PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.359e-19 Identity = 55/192 (28.65%), Postives = 97/192 (50.52%), Query Frame = 2 Query: 65 DSSSDSVSIDMETPPPSGKDNLIKTSHGSLSVTIYGDQ--DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSR 634 D+ +S + K++ I+T +G L V I G ++PA++TY D+ LN+ CF FF E + +F + H++ PG + GA+ ++D LA + V+ HFG +++ +GV AGAY+L FA+ + V G++L++ W +W +K+ G+ + E +L FS+ Sbjct: 40 DTEMESADTFLSAADTDWKEHDIETPYGMLHVVIRGTPKGNRPAILTYHDVGLNHKLCFN-TFFNYEDMQEITKHFVVCHVDAPGQQVGASQFPQGYQYPTMDQLAAMLPSVMQHFGFQSIIAIGVGAGAYVLAKFALIFPELVEGMVLINIDPNGKGWIDWAASKIS-------GLASSLPETVLSHLFSQ 223 The following BLAST results are available for this feature:
BLAST of FC868588 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868588 ID=FC868588; Name=FC868588; organism=Citrus clementina; type=EST; length=722bpback to top |