FC868637

Overview
NameFC868637
Unique NameFC868637
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length542
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC868637 vs. ExPASy Swiss-Prot
Match: GLO2_ECO24 (Hydroxyacylglutathione hydrolase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=gloB PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 3.118e-21
Identity = 63/173 (36.42%), Postives = 89/173 (51.45%), Query Frame = 3 
Query:   27 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEREKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDK-FSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPSVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPNQVYC 542
            M +  IP  +DNY +++ +E  +   +VDP + E ++ A                  DH GG +++ E  P I VYG      KG T  V++G+  F +G   +V++  TP HT GHI Y+        P +F GDTLF  GCG+ FEG+A QMYQSL   L +LP    V C
Sbjct:    1 MNLNSIPAFDDNYIWVLNDEAGR-CLIVDPGDAEPVLNAIAANNWQPEAIFLTHHHHDHVGGVKELVEKFPQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVIA--TPGHTLGHICYF------SKPYLFCGDTLFSGGCGRLFEGTASQMYQSL-NKLSALPDDTLVCC 163
[Close]
BLAST of FC868637 vs. ExPASy Swiss-Prot
Match: GLO2_SHIFL (Hydroxyacylglutathione hydrolase OS=Shigella flexneri GN=gloB PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 5.318e-21
Identity = 63/173 (36.42%), Postives = 89/173 (51.45%), Query Frame = 3 
Query:   27 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEREKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDK-FSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPSVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPNQVYC 542
            M +  IP  +DNY +++ +E  +   +VDP + E ++ A                  DH GG +++ E  P I VYG      KG T  V++G+  F +G   +V++  TP HT GHI Y+        P +F GDTLF  GCG+ FEG+A QMYQSL   L +LP    V C
Sbjct:    1 MNLNSIPAFDDNYIWVLNDEAGR-CLIVDPGDAEPVLNAITANNWQPEAIFLTHHHHDHVGGVKELVEKFPQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVIT--TPGHTLGHICYF------SKPYLFCGDTLFSGGCGRLFEGTALQMYQSL-KKLSALPDDTLVCC 163
[Close]
BLAST of FC868637 vs. ExPASy Swiss-Prot
Match: GLO2_SHIF8 (Hydroxyacylglutathione hydrolase OS=Shigella flexneri serotype 5b (strain 8401) GN=gloB PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 5.318e-21
Identity = 63/173 (36.42%), Postives = 89/173 (51.45%), Query Frame = 3 
Query:   27 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEREKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDK-FSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPSVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPNQVYC 542
            M +  IP  +DNY +++ +E  +   +VDP + E ++ A                  DH GG +++ E  P I VYG      KG T  V++G+  F +G   +V++  TP HT GHI Y+        P +F GDTLF  GCG+ FEG+A QMYQSL   L +LP    V C
Sbjct:    1 MNLNSIPAFDDNYIWVLNDEAGR-CLIVDPGDAEPVLNAITANNWQPEAIFLTHHHHDHVGGVKELVEKFPQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVIT--TPGHTLGHICYF------SKPYLFCGDTLFSGGCGRLFEGTALQMYQSL-KKLSALPDDTLVCC 163
[Close]
BLAST of FC868637 vs. ExPASy Swiss-Prot
Match: GLO2_SHIBS (Hydroxyacylglutathione hydrolase OS=Shigella boydii serotype 4 (strain Sb227) GN=gloB PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 5.318e-21
Identity = 63/173 (36.42%), Postives = 89/173 (51.45%), Query Frame = 3 
Query:   27 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEREKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDK-FSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPSVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPNQVYC 542
            M +  IP  +DNY +++ +E  +   +VDP + E ++ A                  DH GG +++ E  P I VYG      KG T  V++G+  F +G   +V++  TP HT GHI Y+        P +F GDTLF  GCG+ FEG+A QMYQSL   L +LP    V C
Sbjct:    1 MNLNSIPAFDDNYIWVLNDEAGR-CLIVDPGDAEPVLNAITANNWQPEAIFLTHHHHDHVGGVKELVEKFPQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVIT--TPGHTLGHICYF------SKPYLFCGDTLFSGGCGRLFEGTALQMYQSL-KKLSALPDDTLVCC 163
[Close]
BLAST of FC868637 vs. ExPASy Swiss-Prot
Match: GLO2_HYPNA (Hydroxyacylglutathione hydrolase OS=Hyphomonas neptunium (strain ATCC 15444) GN=gloB PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 5.318e-21
Identity = 58/176 (32.95%), Postives = 88/176 (50.00%), Query Frame = 3 
Query:   21 IKMKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEREKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYG--GSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPSVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPNQVYC 542
            + ++I   PCL DNY YL+ E  +     +D  +    +  A++               DHAGGN KIKE   G K+ G  G  D + G   +V+ GD   +G     + +  P HT GHI+++   +E    + F GD +F  GCG+ FEG+ E M++SL   +  LP+  Q+YC
Sbjct:    3 VLIEIHQFPCLNDNYGYLVHEPGSGRTIAIDTPDAAVYLAEAEKMSWTISEIWNTHWHPDHAGGNLKIKEAT-GCKIIGPAGEADKIPGIDRRVKGGDTVELGGATATV-IDVPGHTLGHIAFHFPDQE----AAFVGDAVFALGCGRVFEGTMEMMWESL-KRIKKLPKKTQLYC 171
[Close]
BLAST of FC868637 vs. ExPASy Swiss-Prot
Match: GLO2_ECOSE (Hydroxyacylglutathione hydrolase OS=Escherichia coli (strain SE11) GN=gloB PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 5.318e-21
Identity = 62/173 (35.84%), Postives = 89/173 (51.45%), Query Frame = 3 
Query:   27 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEREKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDK-FSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPSVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPNQVYC 542
            M +  IP  +DNY +++ +E  +   +VDP + E ++ A                  DH GG +++ E  P I VYG      KG T  V++G+  F +G   +V++  TP HT GHI Y+        P +F GDTLF  GCG+ FEG+A QMYQS+   L +LP    V C
Sbjct:    1 MNLNSIPAFDDNYIWVLNDEAGR-CLIVDPGDAEPVLNAIAANNWQPEAIFLTHHHHDHVGGVKELVEKFPQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVIA--TPGHTLGHICYF------SKPYLFCGDTLFSGGCGRLFEGTASQMYQSI-NKLSALPDDTLVCC 163
[Close]
BLAST of FC868637 vs. ExPASy Swiss-Prot
Match: GLO2_ECOLC (Hydroxyacylglutathione hydrolase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=gloB PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 5.318e-21
Identity = 63/173 (36.42%), Postives = 88/173 (50.87%), Query Frame = 3 
Query:   27 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEREKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDK-FSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPSVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPNQVYC 542
            M +  IP  +DNY +++ +E  +   +VDP + E ++ A                  DH GG +++ E  P I VYG      KG T  V++G+  F +G   +V++  TP HT GHI Y+        P +F GDTLF  GCG+ FEG+A QMYQSL   L  LP    V C
Sbjct:    1 MNLNSIPAFDDNYIWVLNDEAGR-CLIVDPGDAEPVLNAIAANNWQPEAIFLTHHHHDHVGGVKELVEKFPQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVIA--TPGHTLGHICYF------SKPYLFCGDTLFSGGCGRLFEGTASQMYQSL-KKLSVLPDDTLVCC 163
[Close]
BLAST of FC868637 vs. ExPASy Swiss-Prot
Match: GLO2_ECOSM (Hydroxyacylglutathione hydrolase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=gloB PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 6.945e-21
Identity = 62/173 (35.84%), Postives = 89/173 (51.45%), Query Frame = 3 
Query:   27 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEREKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDK-FSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPSVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPNQVYC 542
            M +  IP  +DNY +++ +E  +   +VDP + E ++ A                  DH GG +++ +  P I VYG      KG T  V++G+  F +G   +V++  TP HT GHI Y+        P +F GDTLF  GCG+ FEG+A QMYQSL   L +LP    V C
Sbjct:    1 MNLNSIPAFDDNYIWVLNDEAGR-CLIVDPGDAEPVLNAIAANNWQPEAIFLTHHHHDHVGGVKELVKKFPQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVIA--TPGHTLGHICYF------SKPYLFCGDTLFSGGCGRLFEGTASQMYQSL-KKLSALPDDTLVCC 163
[Close]
BLAST of FC868637 vs. ExPASy Swiss-Prot
Match: GLO2_ECOL5 (Hydroxyacylglutathione hydrolase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=gloB PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 6.945e-21
Identity = 62/173 (35.84%), Postives = 88/173 (50.87%), Query Frame = 3 
Query:   27 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEREKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDK-FSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPSVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPNQVYC 542
            M +  IP  +DNY +++ +E  +   +VDP + E ++ A                  DH GG +++ E  P I VYG      KG T  V++G+  F +G   +V++  TP HT GHI Y+        P +F GDTLF  GCG+ FEG+  QMYQSL   L +LP    V C
Sbjct:    1 MNLNSIPAFDDNYIWVLNDEAGR-CLIVDPGDAEPVLNAISANNWQPEAIFLTHHHHDHVGGVKELVEKFPQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVIA--TPGHTLGHICYF------SKPYLFCGDTLFSGGCGRLFEGTPSQMYQSL-KKLSALPDDTLVCC 163
[Close]
BLAST of FC868637 vs. ExPASy Swiss-Prot
Match: GLO2_ECO81 (Hydroxyacylglutathione hydrolase OS=Escherichia coli O81 (strain ED1a) GN=gloB PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 6.945e-21
Identity = 62/173 (35.84%), Postives = 88/173 (50.87%), Query Frame = 3 
Query:   27 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEREKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDK-FSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPSVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPNQVYC 542
            M +  IP  +DNY +++ +E  +   +VDP + E ++ A                  DH GG +++ E  P I VYG      KG T  V++G+  F +G   +V++  TP HT GHI Y+        P +F GDTLF  GCG+ FEG+  QMYQSL   L +LP    V C
Sbjct:    1 MNLNSIPAFDDNYIWVLNDEAGR-CLIVDPGDAEPVLNAISANNWQPEAIFLTHHHHDHVGGVKELVEKFPQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVIA--TPGHTLGHICYF------SKPYLFCGDTLFSGGCGRLFEGTPSQMYQSL-KKLSALPDDTLVCC 163
The following BLAST results are available for this feature:
BLAST of FC868637 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 267
Match NameE-valueIdentityDescription
GLO2_ECO243.118e-2136.42Hydroxyacylglutathione hydrolase OS=Escherichia co... [more]
GLO2_SHIFL5.318e-2136.42Hydroxyacylglutathione hydrolase OS=Shigella flexn... [more]
GLO2_SHIF85.318e-2136.42Hydroxyacylglutathione hydrolase OS=Shigella flexn... [more]
GLO2_SHIBS5.318e-2136.42Hydroxyacylglutathione hydrolase OS=Shigella boydi... [more]
GLO2_HYPNA5.318e-2132.95Hydroxyacylglutathione hydrolase OS=Hyphomonas nep... [more]
GLO2_ECOSE5.318e-2135.84Hydroxyacylglutathione hydrolase OS=Escherichia co... [more]
GLO2_ECOLC5.318e-2136.42Hydroxyacylglutathione hydrolase OS=Escherichia co... [more]
GLO2_ECOSM6.945e-2135.84Hydroxyacylglutathione hydrolase OS=Escherichia co... [more]
GLO2_ECOL56.945e-2135.84Hydroxyacylglutathione hydrolase OS=Escherichia co... [more]
GLO2_ECO816.945e-2135.84Hydroxyacylglutathione hydrolase OS=Escherichia co... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC31002H09EF AbioticL1 Citrus clementina cDNA clone C31002H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868637 ID=FC868637; Name=FC868637; organism=Citrus clementina; type=EST; length=542bp
TTCGTGCACTTTCCCAGAGAATAAAAATGAAAATCTTTCATATTCCTTGT
TTGGAAGACAACTATGCCTACCTGATCATTGAAGAGACCACTAAAGAAGC
TGCAGTTGTTGATCCAGTGGAGAGAGAGAAGATCATTGAGGCTGCCAAAC
AACACGGTGTCAATCTCACCACCGTTCTCACTACTCATCATCACTGGGAC
CATGCTGGAGGGAACGAAAAGATAAAGGAGATGGTGCCTGGGATTAAGGT
GTATGGTGGCTCACTTGATAATGTAAAGGGGTGCACTCATCAAGTGGAAA
ATGGTGATAAGTTCTCAATTGGGGCTCATGTCAATGTACTGTCTCTTCAC
ACGCCTTGCCATACCAAAGGTCACATAAGTTATTATGTGACTGGCAAAGA
GGGAGAAGACCCATCTGTTTTCACTGGAGACACACTGTTTGTCGCTGGTT
GTGGAAAATTTTTTGAAGGCTCGGCAGAACAGATGTATCAATCCCTGTGC
GTAACATTGGGCTCATTACCTCAGCCAAATCAAGTTTACTGT
back to top