FC868653
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: SSG1_ORYGL (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Oryza glaberrima GN=WAXY PE=1 SV=1) HSP 1 Score: 323.168 bits (827), Expect = 8.717e-88 Identity = 159/231 (68.83%), Postives = 186/231 (80.52%), Query Frame = 2 Query: 20 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAEGFTGFQMGSFSVDCEAVDP 712 KINWMKAGILE+D VLTVSP+YA+EL+SG +G ELDNI+R TGI GIVNGMDV EW+P DKYI KYDA+T ++AK L KEALQAE GLPVDR IP+I FIGRLEEQKG D++AAAIP ++E+VQI++LGTGKK EK L+ +E YP K R V KFN PLAH+I+AGAD + +PSRFEPCGLIQL MRYGT ASTGGLVDTV EG TGF MG SV+C+ V+P Sbjct: 304 KINWMKAGILEADRVLTVSPYYAEELISGIARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALNKEALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVKFNAPLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYGTPCACASTGGLVDTVIEGKTGFHMGRLSVNCKVVEP 534
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: SSG1_SORBI (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Sorghum bicolor GN=WAXY PE=2 SV=1) HSP 1 Score: 317.39 bits (812), Expect = 4.783e-86 Identity = 156/231 (67.53%), Postives = 182/231 (78.79%), Query Frame = 2 Query: 20 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAEGFTGFQMGSFSVDCEAVDP 712 KINWMKAGILE+D VLTVSP+YA+EL+SG +G ELDNI+R TGI GIVNGMDV EW+P DKYI VKYD ST ++AK L KEALQAEVGLPVDR IP++ FIGRLEEQKG D++AAAIP ++E++QI++LGTGKK E+ L E YP+K R V KFN LAH I+AGAD + + SRFEPCGLIQL MRYGT ASTGGLVDT+ EG TGF MG SVDC V+P Sbjct: 303 KINWMKAGILEADRVLTVSPYYAEELISGIARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYIAVKYDVSTAVEAKALNKEALQAEVGLPVDRKIPLVAFIGRLEEQKGPDVMAAAIPLLMEEDIQIVLLGTGKKKFERMLMSAEEKYPDKVRAVVKFNAALAHHIMAGADLLAVTSRFEPCGLIQLQGMRYGTPCACASTGGLVDTIIEGKTGFHMGRLSVDCNVVEP 533
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: SSG1_HORVU (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Hordeum vulgare GN=WAXY PE=1 SV=1) HSP 1 Score: 314.309 bits (804), Expect = 4.049e-85 Identity = 152/232 (65.52%), Postives = 184/232 (79.31%), Query Frame = 2 Query: 20 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAEGFTGFQMGSFSVDCEAVDP 712 KINWMKAGIL++D VLTVSP+YA+EL+SGE +G ELDNI+R TGI GIVNGMDV EW+P DK++ V YD +T ++AK L KEALQAEVGLPVDR +P++ FIGRLEEQKG D++ AAIP +K E+VQII+LGTGKK EK L+ +E +P K R V +FN PLAH ++AGAD + + SRFEPCGLIQL MRYGT + ASTGGLVDT+ EG TGF MG SVDC V+P Sbjct: 297 KINWMKAGILQADKVLTVSPYYAEELISGEARGCELDNIMRLTGITGIVNGMDVSEWDPTKDKFLAVNYDITTALEAKALNKEALQAEVGLPVDRKVPLVAFIGRLEEQKGPDVMIAAIPEILKEEDVQIILLGTGKKKFEKLLKSMEEKFPGKVRAVVRFNAPLAHQMMAGADLLAVTSRFEPCGLIQLQGMRYGTPCVCASTGGLVDTIVEGKTGFHMGRLSVDCNVVEP 528
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: SSG1_MAIZE (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Zea mays GN=WAXY PE=3 SV=1) HSP 1 Score: 312.768 bits (800), Expect = 1.178e-84 Identity = 157/233 (67.38%), Postives = 182/233 (78.11%), Query Frame = 2 Query: 20 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAEGFTGFQMGSFSVDCEAVDP 712 KINWMKAGILE+D VLTVSP+YA+EL+SG +G ELDNI+R TGI GIVNGMDV EW+P DKYI VKYD ST ++AK L KEALQAEVGLPVDRNIP++ FIGRLEEQKG D++AAAIP ++ E+VQI++LGTGKK E+ L E +P K R V KFN LAH I+AGAD + + SRFEPCGLIQL MRYGT ASTGGLVDT+ EG TGF MG SVDC V+P Sbjct: 298 KINWMKAGILEADRVLTVSPYYAEELISGIARGCELDNIMRLTGITGIVNGMDVSEWDPSRDKYIAVKYDVSTAVEAKALNKEALQAEVGLPVDRNIPLVAFIGRLEEQKGPDVMAAAIPQLMEMVEDVQIVLLGTGKKKFERMLMSAEEKFPGKVRAVVKFNAALAHHIMAGADVLAVTSRFEPCGLIQLQGMRYGTPCACASTGGLVDTIIEGKTGFHMGRLSVDCNVVEP 530
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: SSG1_WHEAT (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Triticum aestivum GN=WAXY PE=1 SV=1) HSP 1 Score: 310.457 bits (794), Expect = 5.847e-84 Identity = 149/232 (64.22%), Postives = 183/232 (78.88%), Query Frame = 2 Query: 20 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAEGFTGFQMGSFSVDCEAVDP 712 KINWMKAGIL++D VLTVSP+YA+EL+SGE +G ELDNI+R TGI GIVNGMDV EW+P+ DK++ V YD +T ++ K L KEALQAEVGLPVDR +P++ FIGRLEEQKG D++ AAIP +K E+VQI++LGTGKK E+ L+ +E +P K R V +FN PLAH ++AGAD + + SRFEPCGLIQL MRYGT ASTGGLVDT+ EG TGF MG SVDC V+P Sbjct: 309 KINWMKAGILQADKVLTVSPYYAEELISGEARGCELDNIMRLTGITGIVNGMDVSEWDPIKDKFLTVNYDVTTALEGKALNKEALQAEVGLPVDRKVPLVAFIGRLEEQKGPDVMIAAIPEIVKEEDVQIVLLGTGKKKFERLLKSVEEKFPTKVRAVVRFNAPLAHQMMAGADVLAVTSRFEPCGLIQLQGMRYGTPCACASTGGLVDTIVEGKTGFHMGRLSVDCNVVEP 540
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: SSY1_ARATH (Soluble starch synthase, chloroplastic/amyloplastic OS=Arabidopsis thaliana GN=At5g24300 PE=2 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 1.042e-48 Identity = 103/221 (46.61%), Postives = 144/221 (65.16%), Query Frame = 2 Query: 23 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAEGFTGFQMG 679 +N +K I+ SD ++TVS YA E+ + E G L +++ RK+ I GI NG++V EWNP TD++I Y A V + K K ALQ E+GLP+ P+IGFIGRL+ QKG D++ A P + +++Q ++LG+G E + +E Y +K RG FN+P++H I AG D +L+PSRFEPCGL QL+AMRYGT+P+V TGGL DTV E F + G Sbjct: 363 VNVLKGAIVTSDRIITVSQGYAWEITTVEG-GYGLQDLLSSRKSVINGITNGINVDEWNPSTDEHIPFHYSADDVSE-KIKCKMALQKELGLPIRPECPMIGFIGRLDYQKGIDLIQTAGPDLMVDDIQFVMLGSGDPKYESWMRSMEETYRDKFRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHGTGGLRDTV-ENFNPYAEG 580
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: SSY1_ORYSJ (Soluble starch synthase 1, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=Os06g0160700 PE=1 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 1.361e-48 Identity = 97/218 (44.50%), Postives = 145/218 (66.51%), Query Frame = 2 Query: 23 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAEGFTGF 670 +N++K ++ +D ++TVS Y+ E+ + E G L+ ++ RK+ + GIVNG+D+ +WNP TDK++ Y + K K LQ E+GLP+ ++P+IGFIGRL+ QKG D++ AIP +++N+Q ++LG+G E + E Y +K RG F++P++H I AG D +L+PSRFEPCGL QL+AM+YGTVP+V TGGL DTV E F F Sbjct: 353 VNFLKGAVVTADRIVTVSQGYSWEVTTAEG-GQGLNELLSSRKSVLNGIVNGIDINDWNPSTDKFLPYHYSVDD-LSGKAKCKAELQKELGLPIRPDVPLIGFIGRLDYQKGIDLIKLAIPDLMRDNIQFVMLGSGDPGFEGWMRSTESGYRDKFRGWVGFSVPVSHRITAGCDILLMPSRFEPCGLNQLYAMQYGTVPVVHGTGGLRDTV-ENFNPF 567
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: SSY1_ORYSI (Soluble starch synthase 1, chloroplastic/amyloplastic OS=Oryza sativa subsp. indica GN=OsI_021017 PE=2 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 1.361e-48 Identity = 97/218 (44.50%), Postives = 145/218 (66.51%), Query Frame = 2 Query: 23 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAEGFTGF 670 +N++K ++ +D ++TVS Y+ E+ + E G L+ ++ RK+ + GIVNG+D+ +WNP TDK++ Y + K K LQ E+GLP+ ++P+IGFIGRL+ QKG D++ AIP +++N+Q ++LG+G E + E Y +K RG F++P++H I AG D +L+PSRFEPCGL QL+AM+YGTVP+V TGGL DTV E F F Sbjct: 353 VNFLKGAVVTADRIVTVSQGYSWEVTTAEG-GQGLNELLSSRKSVLNGIVNGIDINDWNPSTDKFLPYHYSVDD-LSGKAKCKAELQEELGLPIRPDVPLIGFIGRLDYQKGIDLIKLAIPDLMRDNIQFVMLGSGDPGFEGWMRSTESGYRDKFRGWVGFSVPVSHRITAGCDILLMPSRFEPCGLNQLYAMQYGTVPVVHGTGGLRDTV-ENFNPF 567
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: SSY1_SOLTU (Soluble starch synthase 1, chloroplastic/amyloplastic OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.777e-48 Identity = 99/213 (46.48%), Postives = 143/213 (67.14%), Query Frame = 2 Query: 23 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE 655 +N +K I +D +LTVS Y+ E+ + E G L ++ R++ + GI NG+DV +WNP TD++I Y + + K K LQ E+GLP+ + P+IGFIGRL+ QKG DI+ +AIP ++ +VQ+++LG+G+K E + E L+ +K R FN+P++H I AG D +L+PSRFEPCGL QL+AMRYGT+PIV STGGL DTV + Sbjct: 352 VNVLKGAIAVADRILTVSQGYSWEITTPEG-GYGLHELLSSRQSVLNGITNGIDVNDWNPSTDEHIASHYSIND-LSGKVQCKTDLQKELGLPIRPDCPLIGFIGRLDYQKGVDIILSAIPELMQNDVQVVMLGSGEKQYEDWMRHTENLFKDKFRAWVGFNVPVSHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPIVHSTGGLRDTVKD 562
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: SSY1_WHEAT (Starch synthase 1, chloroplastic/amyloplastic OS=Triticum aestivum GN=WSSI-2 PE=2 SV=2) HSP 1 Score: 191.815 bits (486), Expect = 3.031e-48 Identity = 99/218 (45.41%), Postives = 144/218 (66.06%), Query Frame = 2 Query: 23 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAEGFTGF 670 +N++K ++ +D ++TVS Y+ E+ + E G L+ ++ RK+ + GIVNG+D+ +WNP TDK + Y + K K LQ E+GLPV ++P+IGFIGRL+ QKG D++ AIP ++E+VQ ++LG+G E + E Y +K RG F++P++H I AG D +L+PSRFEPCGL QL+AM+YGTVP+V TGGL DTV E F F Sbjct: 359 VNFLKGAVVTADRIVTVSQGYSWEVTTAEG-GQGLNELLSSRKSVLNGIVNGIDINDWNPTTDKCLPHHYSVDD-LSGKAKCKAELQKELGLPVREDVPLIGFIGRLDYQKGIDLIKMAIPELMREDVQFVMLGSGDPIFEGWMRSTESSYKDKFRGWVGFSVPVSHRITAGCDILLMPSRFEPCGLNQLYAMQYGTVPVVHGTGGLRDTV-ETFNPF 573 The following BLAST results are available for this feature:
BLAST of FC868653 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 364
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC868653 ID=FC868653; Name=FC868653; organism=Citrus clementina; type=EST; length=713bpback to top |