FC868653

Overview
NameFC868653
Unique NameFC868653
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length713
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_SYNR3 (Glycogen synthase OS=Synechococcus sp. (strain RCC307) GN=glgA PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.106e-37
Identity = 94/231 (40.69%), Postives = 136/231 (58.87%), Query Frame = 2
Query:   32 MKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAEGFTGFQMGS-FSVD-CEAVD 709
            M A +L +D V  VSP YAQE+ + E  G +L+ ++      ++GI+NG+DV+ WNP TD  I   Y  +  +  K + K ALQ  +GL V+ +  VIG + RL +QKG D+L      F+   + QI+VLGTG + +E  L Q+   +  +      ++  L+ +I AG+D  L+PSRFEPCG+ QL +MRYGT+P+V   GGLVDTV       Q G+ F  D  EA+D
Sbjct:  180 MAAALLYADRVNAVSPTYAQEIRTPE-YGEQLEGLLNYISGKLRGILNGIDVEAWNPATDSRIPATYSTAD-LSGKAVCKRALQERMGLQVNPDTFVIGLVSRLVDQKGVDLLLQVAERFLAYTDTQIVVLGTGDRHLESGLWQMASQHSGRFASFLTYDDDLSRLIYAGSDAFLMPSRFEPCGISQLLSMRYGTIPVVRRVGGLVDTVPPYVPATQEGNGFCFDRYEAID 408          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_OCEIH (Glycogen synthase OS=Oceanobacillus iheyensis GN=glgA PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.363e-37
Identity = 83/211 (39.34%), Postives = 133/211 (63.03%), Query Frame = 2
Query:   23 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 649
            IN +K+GI  +D + TVSP YA+E+++    G  L+ ++  R+  + G++NG+D++++NP  DK + V Y ++     K   ++ L  E+GL +   +P+   + RL EQKG  ++   +  F++E++Q+IVLG G++  E   + +E  YP+K      FN  LA  + A ADF+L+PS+FEPCGL QL A++Y TVPIV  TGGL DT+
Sbjct:  194 INSLKSGIFHADKITTVSPTYAEEILTPY-YGAGLEEMLWNRREDLIGVLNGIDLKDYNPAIDKSLPVNYRSAR--SKKIENRKLLYEEIGLNLKDGVPLYIMVTRLVEQKGIHLVQRILEEFLQEDIQLIVLGNGEQEFEYYFKDIEYRYPDKMITHLHFNESLARRLYASADFLLMPSKFEPCGLSQLIALQYKTVPIVRETGGLKDTI 401          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_MANSM (Glycogen synthase OS=Mannheimia succiniciproducens (strain MBEL55E) GN=glgA PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.363e-37
Identity = 89/215 (41.40%), Postives = 128/215 (59.53%), Query Frame = 2
Query:   20 KINWMKAGILESDMVLTVSPHYAQELVSGEDK-GVE--LDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE 655
            +I+++KAG+  SD V  VSP YA+E+ + E   G E  L  +  +  + GI+NG+D   WNP TD YI   Y   + M  K   K ALQA   LP   +  +   I RL EQKG D+L  +  + IK+  Q+ +LG+G   +E  L  L   +P+       ++ PL+H+++AG D IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV +
Sbjct:  195 QISYLKAGLYYSDAVTAVSPTYAREITTPEFAYGFEGLLSTLHSQGKLVGILNGVDDNIWNPNTDGYIQDHYKLKS-MTGKKKNKAALQAHFNLPEKPDALLFVMITRLTEQKGVDLLIQSAENIIKQGGQLALLGSGAPSLESALLGLAHKHPKNIAVKIGYDEPLSHLMVAGGDVILVPSRFEPCGLTQLYGLKYGTLPLVRQTGGLADTVVD 408          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_ACTP7 (Glycogen synthase OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=glgA PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 7.004e-37
Identity = 86/216 (39.81%), Postives = 128/216 (59.26%), Query Frame = 2
Query:   20 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIR----KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE 655
            +I+++KAG+  +D + TVSP YA E+   E  G  +  +++    +  + G++NG+D   WNP TD  I   Y  S  M  K   K  LQ    LP D++  ++  + RL EQKG+D +   I   ++E VQ++VLG+G   +E  L +    +PE+      +N  L+H IIAG D IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV +
Sbjct:  195 EISYLKAGLYFADKITTVSPTYALEITE-EIAGGGMHGLLQTRKAQGRLHGVLNGVDDTVWNPETDTNIVATYKPS-YMQGKSKNKAELQQMFHLPEDKDAMLMVMVTRLTEQKGADFILDRIDELMEERVQLVVLGSGSPHLEYLLNEARSRHPEQIGIYIGYNEALSHQIIAGGDVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVVD 408          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_ACTP2 (Glycogen synthase OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=glgA PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 7.004e-37
Identity = 86/216 (39.81%), Postives = 128/216 (59.26%), Query Frame = 2
Query:   20 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIR----KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE 655
            +I+++KAG+  +D + TVSP YA E+   E  G  +  +++    +  + G++NG+D   WNP TD  I   Y  S  M  K   K  LQ    LP D++  ++  + RL EQKG+D +   I   ++E VQ++VLG+G   +E  L +    +PE+      +N  L+H IIAG D IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV +
Sbjct:  195 EISYLKAGLYFADKITTVSPTYALEITE-EIAGGGMHGLLQTRKAQGRLHGVLNGVDDTVWNPETDTNIVATYKPS-YMQGKSKNKAELQQMFHLPEDKDAMLMVMVTRLTEQKGADFILDRIDELMEERVQLVVLGSGSPHLEYLLNEARSRHPEQIGIYIGYNEALSHQIIAGGDVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVVD 408          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_DECAR (Glycogen synthase OS=Dechloromonas aromatica (strain RCB) GN=glgA PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 9.147e-37
Identity = 89/214 (41.59%), Postives = 128/214 (59.81%), Query Frame = 2
Query:   20 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE 655
            +++++KAG+  +  + TVSP YA+E +  E  G  L  ++R     ++GI+NG+D   WNP TD  +   Y A+ +  AK   K ALQ E+GL V  + P+ G I RL  QKG D+L        +   Q++VLG+G K ME    +L   +P +      F+  LAH I AGAD  ++PSRFEPCGL Q++++RYGT PIV +TGGL DTV +
Sbjct:  200 QLSFLKAGLQLASQISTVSPTYARE-IQDEHFGYGLAPLLRHRSAELRGILNGVDTDLWNPATDPVLATGYAANRLA-AKRTNKAALQTEMGLEVTADRPLFGVISRLTSQKGLDLLLTVAEGLPELPAQLVVLGSGDKLMEAGFVELAKRFPAQIVVKIGFDEGLAHRIEAGADCFVMPSRFEPCGLNQMYSLRYGTPPIVRATGGLADTVVD 411          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA1_SYNY3 (Glycogen synthase 1 OS=Synechocystis sp. (strain PCC 6803) GN=glgA1 PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 9.147e-37
Identity = 94/234 (40.17%), Postives = 138/234 (58.97%), Query Frame = 2
Query:   26 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIR--KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVA------EGFTGFQMGSFS-VDC 697
            N M A I  ++ V TVSP YAQ++ +    G +L+ ++      + GI+NG+D + +NP  D++I   +DA + +D +   K A+Q E GL ++RN  V+G + RL EQKG D++   +  F+   + Q+I+LGTG +  E QL Q+   +P +       N  L+  + AGAD  L+PSRFEPCGL QL AMRYG +PIV  TGGLVDTV+      E  TG+    +  +DC
Sbjct:  178 NVMAAAIQFANRVTTVSPTYAQQIQTPA-YGEKLEGLLSYLSGNLVGILNGIDTEIYNPAEDRFISNVFDADS-LDKRVKNKIAIQEETGLEINRNAMVVGIVARLVEQKGIDLVIQILDRFMSYTDSQLIILGTGDRHYETQLWQMASRFPGRMAVQLLHNDALSRRVYAGADVFLMPSRFEPCGLSQLMAMRYGCIPIVRRTGGLVDTVSFYDPINEAGTGYCFDRYEPLDC 409          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_VIBPA (Glycogen synthase OS=Vibrio parahaemolyticus GN=glgA PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.195e-36
Identity = 83/212 (39.15%), Postives = 129/212 (60.85%), Query Frame = 2
Query:   23 INWMKAGILESDMVLTVSPHYAQELVSG-EDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKY--DASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 649
            I  +KAG++ +D +  VSP YA+EL +     G+  +   R   + GI+NG D   WNP TD Y+ + Y  D  +++  K   K ALQ  + L  ++++ + G + RL +QKG   L  A+  F+K +VQ++V+GTG   +  QLE++   + +K   V  ++  LAH++ AG+DF L+PS FEPCGL Q+++M YGT+PIV   GGL D+V
Sbjct:  204 ITMLKAGVMNADKINAVSPTYAEELKTELGSHGMAWEFQQRAGDLVGILNGCDYSAWNPETDIYLPMNYSADKQSMVLGKNTCKRALQQRLNL-AEKDVAMFGMVCRLTQQKGVHYLLPALADFLKHDVQVVVVGTGDPVLAAQLEEVAAQFSDKFVFVEAYDNELAHLVEAGSDFFLMPSEFEPCGLNQIYSMAYGTLPIVRGVGGLKDSV 414          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_SYNP6 (Glycogen synthase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=glgA PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.195e-36
Identity = 91/209 (43.54%), Postives = 129/209 (61.72%), Query Frame = 2
Query:   32 MKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 649
            M A +L +D V TVSP YAQ++ +    G +L+ ++      + GI+NG+DV  +NP TD  I    D  T +D +   K ALQ E+GL V+ +  +IGF+ RL EQKG D+L   +  F+   + Q +VLGTG++  E QL +L   YP +      ++  L+  I AG+D  L+PSRFEPCG+ Q+ A+RYG+VPIV  TGGLVDTV
Sbjct:  180 MAAALLYADRVNTVSPTYAQQIQT-PTYGEKLEGLLSFISGKLSGILNGIDVDSYNPATDTRIVANCDRDT-LDKRLNNKLALQKEMGLEVNPDRFLIGFVARLVEQKGIDLLLQILDRFLSYSDAQFVVLGTGERYYETQLWELATRYPGRMSTYLMYDEGLSRRIYAGSDAFLVPSRFEPCGITQMLALRYGSVPIVRRTGGLVDTV 386          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_NITMU (Glycogen synthase OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=glgA PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.195e-36
Identity = 87/212 (41.04%), Postives = 132/212 (62.26%), Query Frame = 2
Query:   23 INWMKAGILESDMVLTVSPHYAQEL-VSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE 655
            ++++KAG+   D ++TVSP YA+E+ V+    G+E    +R   I GIVNG+   EWNP+ D ++   Y     +  K + K ALQ ++GL VD ++P+ G + RL  QKG D+L   I   I    Q+++LG+G+  +E++L ++   +P K      F+  LAH+I AGAD  L+PSRFEPCGL Q+++  YGT P+V  TGGL+DTV +
Sbjct:  213 MSFLKAGLYYCDHIVTVSPTYAREIQVAPLGFGMEGLLSLRHEHITGIVNGIS-DEWNPVNDPHLEQNYSMDD-LSGKVINKAALQQQLGLTVDPDVPLFGAVSRLTYQKGYDLLLRIITQLIDIPGQLVILGSGETMLEQELMRMARNHPGKMAVRIGFDEKLAHLIEAGADCFLMPSRFEPCGLNQMYSQCYGTPPLVHGTGGLLDTVVD 422          
The following BLAST results are available for this feature:
BLAST of FC868653 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 364
Match NameE-valueIdentityDescription
GLGA_SYNR34.106e-3740.69Glycogen synthase OS=Synechococcus sp. (strain RCC... [more]
GLGA_OCEIH5.363e-3739.34Glycogen synthase OS=Oceanobacillus iheyensis GN=g... [more]
GLGA_MANSM5.363e-3741.40Glycogen synthase OS=Mannheimia succiniciproducens... [more]
GLGA_ACTP77.004e-3739.81Glycogen synthase OS=Actinobacillus pleuropneumoni... [more]
GLGA_ACTP27.004e-3739.81Glycogen synthase OS=Actinobacillus pleuropneumoni... [more]
GLGA_DECAR9.147e-3741.59Glycogen synthase OS=Dechloromonas aromatica (stra... [more]
GLGA1_SYNY39.147e-3740.17Glycogen synthase 1 OS=Synechocystis sp. (strain P... [more]
GLGA_VIBPA1.195e-3639.15Glycogen synthase OS=Vibrio parahaemolyticus GN=gl... [more]
GLGA_SYNP61.195e-3643.54Glycogen synthase OS=Synechococcus sp. (strain ATC... [more]
GLGA_NITMU1.195e-3641.04Glycogen synthase OS=Nitrosospira multiformis (str... [more]

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Properties
Property NameValue
Genbank descriptionC31003B03EF AbioticL1 Citrus clementina cDNA clone C31003B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868653 ID=FC868653; Name=FC868653; organism=Citrus clementina; type=EST; length=713bp
ATAAACCTGTGAGAGGATCAAAATCAACTGGATGAAAGCTGGAATATTAG
AATCAGACATGGTCTTAACTGTGAGCCCACACTATGCCCAAGAACTTGTT
TCTGGTGAAGACAAAGGAGTAGAATTGGATAACATCATCCGTAAAACTGG
CATTAAGGGAATTGTGAACGGGATGGATGTCCAGGAGTGGAACCCCTTGA
CTGACAAATATATAGGTGTCAAATATGATGCTTCAACTGTGATGGATGCG
AAGCCTCTTCTGAAGGAAGCCCTCCAAGCAGAAGTTGGGTTGCCTGTCGA
TAGAAATATTCCTGTCATAGGCTTCATTGGTAGACTTGAAGAGCAGAAAG
GCTCAGATATTCTTGCAGCTGCCATTCCCCATTTCATCAAAGAGAATGTT
CAGATAATAGTCCTTGGTACTGGCAAAAAACCAATGGAGAAGCAGCTTGA
ACAGTTGGAGATACTGTACCCTGAGAAAGCCAGAGGAGTAGCGAAATTCA
ATATTCCTCTGGCGCATATGATAATAGCAGGAGCTGATTTTATTTTGATT
CCAAGCAGATTTGAACCTTGTGGTCTCATTCAATTACATGCCATGCGTTA
TGGAACCGTACCTATCGTGGCTTCCACTGGTGGTTTGGTTGACACTGTGG
CAGAAGGCTTTACAGGATTCCAGATGGGAAGCTTCAGTGTTGACTGTGAG
GCTGTGGATCCAG
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