FC868653

Overview
NameFC868653
Unique NameFC868653
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length713
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_CLOK5 (Glycogen synthase OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=glgA PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 7.744e-36
Identity = 93/233 (39.91%), Postives = 130/233 (55.79%), Query Frame = 2
Query:   23 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRK--TGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV-------AEGFTGFQMGSFSVD 694
            +++MK+GI  SD + TVS  YA E+ S E  G  LD ++R   + + GIVNG+D   +NP  D  I   Y+ + + + K + K  +Q ++ L ++ N+PV+  I R   QKG DI+       + ++VQ+IVLGTG    E+    L   YP        F+  LAH I A +D  L+PS FEPCGL QL A+RYGT+PIV  TGGL DT+        EG  GF   +F  D
Sbjct:  198 VSFMKSGINYSDKISTVSRSYAFEIQSPE-YGENLDGLLRSRSSDLWGIVNGIDYDIYNPEKDNMIFRNYNKNNLRN-KMINKLKIQNDLNLDINENVPVLAIISRFTPQKGMDIIKTIGERLVSKHVQLIVLGTGYNEYEEYFRYLSSKYPRNVSTNIYFDDVLAHKIYAASDMFLMPSLFEPCGLGQLIALRYGTIPIVRETGGLKDTIIPYNKYTGEG-NGFSFANFDGD 427          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_CLOK1 (Glycogen synthase OS=Clostridium kluyveri (strain NBRC 12016) GN=glgA PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 7.744e-36
Identity = 93/233 (39.91%), Postives = 130/233 (55.79%), Query Frame = 2
Query:   23 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRK--TGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV-------AEGFTGFQMGSFSVD 694
            +++MK+GI  SD + TVS  YA E+ S E  G  LD ++R   + + GIVNG+D   +NP  D  I   Y+ + + + K + K  +Q ++ L ++ N+PV+  I R   QKG DI+       + ++VQ+IVLGTG    E+    L   YP        F+  LAH I A +D  L+PS FEPCGL QL A+RYGT+PIV  TGGL DT+        EG  GF   +F  D
Sbjct:  198 VSFMKSGINYSDKISTVSRSYAFEIQSPE-YGENLDGLLRSRSSDLWGIVNGIDYDIYNPEKDNMIFRNYNKNNLRN-KMINKLKIQNDLNLDINENVPVLAIISRFTPQKGMDIIKTIGERLVSKHVQLIVLGTGYNEYEEYFRYLSSKYPRNVSTNIYFDDVLAHKIYAASDMFLMPSLFEPCGLGQLIALRYGTIPIVRETGGLKDTIIPYNKYTGEG-NGFSFANFDGD 427          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_YERPY (Glycogen synthase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=glgA PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.011e-35
Identity = 81/215 (37.67%), Postives = 128/215 (59.53%), Query Frame = 2
Query:   20 KINWMKAGILESDMVLTVSPHYAQELVSGE-DKGVE--LDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE 655
            +I+++KAG+  +D V TVSP YA+E+       G+E  L  + R+  + GI+NG+D   W+P +D  +  +YDA   + AK + K  LQ  +GL +  N P+   + RL  QKG D++  A+P  +    Q++VLG+G   +++        +  +      ++   +H IIAG+D IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV +
Sbjct:  194 QISYLKAGLFFADHVTTVSPTYAKEITQPAFGYGMEGLLQALARQGRLTGILNGVDSDIWDPQSDTLLPTRYDAEN-LQAKAINKTHLQTAMGLQLAENKPIFAVVSRLTVQKGLDLVLEALPELLALGGQLVVLGSGDATLQEAFLAAAAEHSGQVGVQIGYHEAFSHRIIAGSDVILVPSRFEPCGLTQLYGLKYGTLPLVRHTGGLADTVVD 407          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_YERPS (Glycogen synthase OS=Yersinia pseudotuberculosis GN=glgA PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.011e-35
Identity = 81/215 (37.67%), Postives = 128/215 (59.53%), Query Frame = 2
Query:   20 KINWMKAGILESDMVLTVSPHYAQELVSGE-DKGVE--LDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE 655
            +I+++KAG+  +D V TVSP YA+E+       G+E  L  + R+  + GI+NG+D   W+P +D  +  +YDA   + AK + K  LQ  +GL +  N P+   + RL  QKG D++  A+P  +    Q++VLG+G   +++        +  +      ++   +H IIAG+D IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV +
Sbjct:  194 QISYLKAGLFFADHVTTVSPTYAKEITQPAFGYGMEGLLQALARQGRLTGILNGVDSDIWDPQSDTLLPTRYDAEN-LQAKAINKTHLQTAMGLQLAENKPIFAVVSRLTVQKGLDLVLEALPELLALGGQLVVLGSGDATLQEAFLAAAAEHSGQVGVQIGYHEAFSHRIIAGSDVILVPSRFEPCGLTQLYGLKYGTLPLVRHTGGLADTVVD 407          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_YERPP (Glycogen synthase OS=Yersinia pestis (strain Pestoides F) GN=glgA PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.011e-35
Identity = 81/215 (37.67%), Postives = 128/215 (59.53%), Query Frame = 2
Query:   20 KINWMKAGILESDMVLTVSPHYAQELVSGE-DKGVE--LDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE 655
            +I+++KAG+  +D V TVSP YA+E+       G+E  L  + R+  + GI+NG+D   W+P +D  +  +YDA   + AK + K  LQ  +GL +  N P+   + RL  QKG D++  A+P  +    Q++VLG+G   +++        +  +      ++   +H IIAG+D IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV +
Sbjct:  194 QISYLKAGLFFADHVTTVSPTYAKEITQPAFGYGMEGLLQALARQGRLTGILNGVDSDIWDPQSDTLLPTRYDAEN-LQAKAINKTHLQTAMGLQLAENKPIFAVVSRLTVQKGLDLVLEALPELLALGGQLVVLGSGDATLQEAFLAAAAEHSGQVGVQIGYHEAFSHRIIAGSDVILVPSRFEPCGLTQLYGLKYGTLPLVRHTGGLADTVVD 407          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_YERPN (Glycogen synthase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=glgA PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.011e-35
Identity = 81/215 (37.67%), Postives = 128/215 (59.53%), Query Frame = 2
Query:   20 KINWMKAGILESDMVLTVSPHYAQELVSGE-DKGVE--LDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE 655
            +I+++KAG+  +D V TVSP YA+E+       G+E  L  + R+  + GI+NG+D   W+P +D  +  +YDA   + AK + K  LQ  +GL +  N P+   + RL  QKG D++  A+P  +    Q++VLG+G   +++        +  +      ++   +H IIAG+D IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV +
Sbjct:  194 QISYLKAGLFFADHVTTVSPTYAKEITQPAFGYGMEGLLQALARQGRLTGILNGVDSDIWDPQSDTLLPTRYDAEN-LQAKAINKTHLQTAMGLQLAENKPIFAVVSRLTVQKGLDLVLEALPELLALGGQLVVLGSGDATLQEAFLAAAAEHSGQVGVQIGYHEAFSHRIIAGSDVILVPSRFEPCGLTQLYGLKYGTLPLVRHTGGLADTVVD 407          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_YERPG (Glycogen synthase OS=Yersinia pestis bv. Antiqua (strain Angola) GN=glgA PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.011e-35
Identity = 81/215 (37.67%), Postives = 128/215 (59.53%), Query Frame = 2
Query:   20 KINWMKAGILESDMVLTVSPHYAQELVSGE-DKGVE--LDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE 655
            +I+++KAG+  +D V TVSP YA+E+       G+E  L  + R+  + GI+NG+D   W+P +D  +  +YDA   + AK + K  LQ  +GL +  N P+   + RL  QKG D++  A+P  +    Q++VLG+G   +++        +  +      ++   +H IIAG+D IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV +
Sbjct:  194 QISYLKAGLFFADHVTTVSPTYAKEITQPAFGYGMEGLLQALARQGRLTGILNGVDSDIWDPQSDTLLPTRYDAEN-LQAKAINKTHLQTAMGLQLAENKPIFAVVSRLTVQKGLDLVLEALPELLALGGQLVVLGSGDATLQEAFLAAAAEHSGQVGVQIGYHEAFSHRIIAGSDVILVPSRFEPCGLTQLYGLKYGTLPLVRHTGGLADTVVD 407          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_YERPE (Glycogen synthase OS=Yersinia pestis GN=glgA PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.011e-35
Identity = 81/215 (37.67%), Postives = 128/215 (59.53%), Query Frame = 2
Query:   20 KINWMKAGILESDMVLTVSPHYAQELVSGE-DKGVE--LDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE 655
            +I+++KAG+  +D V TVSP YA+E+       G+E  L  + R+  + GI+NG+D   W+P +D  +  +YDA   + AK + K  LQ  +GL +  N P+   + RL  QKG D++  A+P  +    Q++VLG+G   +++        +  +      ++   +H IIAG+D IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV +
Sbjct:  194 QISYLKAGLFFADHVTTVSPTYAKEITQPAFGYGMEGLLQALARQGRLTGILNGVDSDIWDPQSDTLLPTRYDAEN-LQAKAINKTHLQTAMGLQLAENKPIFAVVSRLTVQKGLDLVLEALPELLALGGQLVVLGSGDATLQEAFLAAAAEHSGQVGVQIGYHEAFSHRIIAGSDVILVPSRFEPCGLTQLYGLKYGTLPLVRHTGGLADTVVD 407          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_YERPA (Glycogen synthase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=glgA PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.011e-35
Identity = 81/215 (37.67%), Postives = 128/215 (59.53%), Query Frame = 2
Query:   20 KINWMKAGILESDMVLTVSPHYAQELVSGE-DKGVE--LDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE 655
            +I+++KAG+  +D V TVSP YA+E+       G+E  L  + R+  + GI+NG+D   W+P +D  +  +YDA   + AK + K  LQ  +GL +  N P+   + RL  QKG D++  A+P  +    Q++VLG+G   +++        +  +      ++   +H IIAG+D IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV +
Sbjct:  194 QISYLKAGLFFADHVTTVSPTYAKEITQPAFGYGMEGLLQALARQGRLTGILNGVDSDIWDPQSDTLLPTRYDAEN-LQAKAINKTHLQTAMGLQLAENKPIFAVVSRLTVQKGLDLVLEALPELLALGGQLVVLGSGDATLQEAFLAAAAEHSGQVGVQIGYHEAFSHRIIAGSDVILVPSRFEPCGLTQLYGLKYGTLPLVRHTGGLADTVVD 407          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_VIBVU (Glycogen synthase OS=Vibrio vulnificus GN=glgA PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.011e-35
Identity = 81/211 (38.39%), Postives = 128/211 (60.66%), Query Frame = 2
Query:   32 MKAGILESDMVLTVSPHYAQELVSG-EDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDAS--TVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE 655
            +KAG++ +D +  VSP YA+EL +     G+  +   R   + GI+NG D   W+P TD Y+ + Y A+  +++  K   K ALQ +VGLP+ +++ + G + RL  QKG   L   +  F+K +VQ++++GTG   +  QL  +   + EK   V  +N  LAH++ A +DF L+PS FEPCGL Q+++M YG++PIV   GGL D+V +
Sbjct:  202 LKAGVMNADKINAVSPTYAEELKTELGSHGMAWEFQQRAGDLVGILNGCDYSAWHPDTDSYLPINYKATKQSMVRGKNGCKRALQEQVGLPI-KDVAMFGMVCRLTHQKGVHYLLPVLTEFLKLDVQLVLVGTGDPLLAAQLRDVAAQFGEKFVFVEAYNNQLAHLVEAASDFFLMPSEFEPCGLNQIYSMAYGSLPIVRGVGGLKDSVCD 411          
The following BLAST results are available for this feature:
BLAST of FC868653 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 364
Match NameE-valueIdentityDescription
GLGA_CLOK57.744e-3639.91Glycogen synthase OS=Clostridium kluyveri (strain ... [more]
GLGA_CLOK17.744e-3639.91Glycogen synthase OS=Clostridium kluyveri (strain ... [more]
GLGA_YERPY1.011e-3537.67Glycogen synthase OS=Yersinia pseudotuberculosis s... [more]
GLGA_YERPS1.011e-3537.67Glycogen synthase OS=Yersinia pseudotuberculosis G... [more]
GLGA_YERPP1.011e-3537.67Glycogen synthase OS=Yersinia pestis (strain Pesto... [more]
GLGA_YERPN1.011e-3537.67Glycogen synthase OS=Yersinia pestis bv. Antiqua (... [more]
GLGA_YERPG1.011e-3537.67Glycogen synthase OS=Yersinia pestis bv. Antiqua (... [more]
GLGA_YERPE1.011e-3537.67Glycogen synthase OS=Yersinia pestis GN=glgA PE=3 ... [more]
GLGA_YERPA1.011e-3537.67Glycogen synthase OS=Yersinia pestis bv. Antiqua (... [more]
GLGA_VIBVU1.011e-3538.39Glycogen synthase OS=Vibrio vulnificus GN=glgA PE=... [more]

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Properties
Property NameValue
Genbank descriptionC31003B03EF AbioticL1 Citrus clementina cDNA clone C31003B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868653 ID=FC868653; Name=FC868653; organism=Citrus clementina; type=EST; length=713bp
ATAAACCTGTGAGAGGATCAAAATCAACTGGATGAAAGCTGGAATATTAG
AATCAGACATGGTCTTAACTGTGAGCCCACACTATGCCCAAGAACTTGTT
TCTGGTGAAGACAAAGGAGTAGAATTGGATAACATCATCCGTAAAACTGG
CATTAAGGGAATTGTGAACGGGATGGATGTCCAGGAGTGGAACCCCTTGA
CTGACAAATATATAGGTGTCAAATATGATGCTTCAACTGTGATGGATGCG
AAGCCTCTTCTGAAGGAAGCCCTCCAAGCAGAAGTTGGGTTGCCTGTCGA
TAGAAATATTCCTGTCATAGGCTTCATTGGTAGACTTGAAGAGCAGAAAG
GCTCAGATATTCTTGCAGCTGCCATTCCCCATTTCATCAAAGAGAATGTT
CAGATAATAGTCCTTGGTACTGGCAAAAAACCAATGGAGAAGCAGCTTGA
ACAGTTGGAGATACTGTACCCTGAGAAAGCCAGAGGAGTAGCGAAATTCA
ATATTCCTCTGGCGCATATGATAATAGCAGGAGCTGATTTTATTTTGATT
CCAAGCAGATTTGAACCTTGTGGTCTCATTCAATTACATGCCATGCGTTA
TGGAACCGTACCTATCGTGGCTTCCACTGGTGGTTTGGTTGACACTGTGG
CAGAAGGCTTTACAGGATTCCAGATGGGAAGCTTCAGTGTTGACTGTGAG
GCTGTGGATCCAG
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