FC868653

Overview
NameFC868653
Unique NameFC868653
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length713
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_PROMT (Glycogen synthase OS=Prochlorococcus marinus (strain NATL2A) GN=glgA PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.011e-35
Identity = 83/209 (39.71%), Postives = 126/209 (60.29%), Query Frame = 2
Query:   32 MKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 649
            M + +L +D V  VSP Y++E+ + E  G +L+ ++      ++GI+NG+D+ EWNP TD  +  K+    +   + + K  LQ  +GL V+ +  ++G +GRL +QKG D+L       +   + Q++VLGTG + +E  L QL I YP +      ++  L+ +I  GAD  L+PSRFEPCG+ QL AMRYG +PIV   GGLVDTV
Sbjct:  180 MASAMLYADRVNAVSPTYSREIRTSE-YGEKLEGLLNYISGKLRGILNGVDLDEWNPATDNSLPAKFSVDNI-SGRAINKRVLQERMGLEVNPDKYLMGMVGRLVDQKGIDLLLQVANRLLSYTDSQVVVLGTGDRYLESSLWQLAIEYPGRFSVFLTYDDALSRLIYGGADAFLMPSRFEPCGISQLLAMRYGAIPIVRKVGGLVDTV 386          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_PROMM (Glycogen synthase OS=Prochlorococcus marinus (strain MIT 9313) GN=glgA PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.011e-35
Identity = 85/209 (40.67%), Postives = 129/209 (61.72%), Query Frame = 2
Query:   32 MKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 649
            M A +L +D V  VSP YA+E+ + E  G  LD ++      ++GI+NG+D+Q+W+P  DK +   ++A   +  + + K+ALQ  +GL V+ +  ++G + RL +QKG D+L       +   + QI+VLGTG++ +E  L QL I  P +      ++  LA +I  G+D  L+PSRFEPCG+ QL AMRYG+VP+V   GGLVDTV
Sbjct:  180 MAAALLYADRVNAVSPTYAREICTSE-YGESLDGLLNYISGKLRGILNGIDLQDWDPGNDKSLPATFNADD-LSGRAVNKQALQQRMGLEVNPDTYLLGMVSRLVDQKGVDLLLQVTERLLAYTDSQIVVLGTGERGLESGLWQLAIQNPGRFSVFLTYDDDLARLIYGGSDAFLMPSRFEPCGISQLLAMRYGSVPVVRKVGGLVDTV 386          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_PROM1 (Glycogen synthase OS=Prochlorococcus marinus (strain NATL1A) GN=glgA PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.011e-35
Identity = 83/209 (39.71%), Postives = 126/209 (60.29%), Query Frame = 2
Query:   32 MKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 649
            M + +L +D V  VSP Y++E+ + E  G +L+ ++      ++GI+NG+D+ EWNP TD  +  K+    +   + + K  LQ  +GL V+ +  ++G +GRL +QKG D+L       +   + Q++VLGTG + +E  L QL I YP +      ++  L+ +I  GAD  L+PSRFEPCG+ QL AMRYG +PIV   GGLVDTV
Sbjct:  180 MASAMLYADRVNAVSPTYSREIRTSE-YGEKLEGLLNYISGKLRGILNGVDLDEWNPATDNSLPAKFSVDNI-SGRAINKRVLQERMGLEVNPDKYLMGMVGRLVDQKGIDLLLQVANRLLSYTDSQVVVLGTGDRYLESSLWQLAIEYPGRFSVFLTYDDALSRLIYGGADAFLMPSRFEPCGISQLLAMRYGAIPIVRKVGGLVDTV 386          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_PECCP (Glycogen synthase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=glgA PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.011e-35
Identity = 82/215 (38.14%), Postives = 125/215 (58.14%), Query Frame = 2
Query:   20 KINWMKAGILESDMVLTVSPHYAQEL-VSGEDKGVE--LDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE 655
            +I+++KAG+  +D + TVSP YA E+ +     G+E  L +   +  + GI+NG+D   WNP  D  +   Y   T+ + K   K  LQ  +GL VD  +PV   + RL  QKG DI  +AIP  +++  Q++VLG G   +++        Y  +      ++   +H II GAD I++PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV++
Sbjct:  194 QISYLKAGLYYADHITTVSPTYAHEITLPAYGYGMEGLLKSREEEGRLSGILNGVDEMIWNPAHDPLLASHYSRDTLAN-KAENKRRLQTAMGLKVDDKVPVFAIVSRLTSQKGLDIALSAIPDLLEQGGQVVVLGAGDADLQEGFLAAAAEYHGQVGVQIGYHEAFSHRIIGGADVIMVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSD 407          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_HAEIN (Glycogen synthase OS=Haemophilus influenzae GN=glgA PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.011e-35
Identity = 82/215 (38.14%), Postives = 127/215 (59.07%), Query Frame = 2
Query:   20 KINWMKAGILESDMVLTVSPHYAQELVSGEDK-GVE--LDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE 655
            +I+++K+G+  SD    VSP YAQE+ + E   G++  L  +  +  + GI+NG+D   W+P  D+YI   Y     M  K   K  LQA   LP D +      + RL EQKG D+L  +    +K+  Q+++LG+G   +E+ + +L   YP+       ++  L+H+++AG D IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV +
Sbjct:  194 QISYLKSGLFYSDASTAVSPTYAQEITTPEFAYGLQGLLSGLKAQGRLVGILNGVDENIWHPNVDQYIPHHYKLK-YMAGKKKNKAELQAYFNLPQDESALAFVMVTRLTEQKGVDLLIESADEIVKQGGQLMILGSGAPHLEQGIRELAERYPQNIAVKIGYDEALSHLMVAGGDVILVPSRFEPCGLTQLYGLQYGTLPLVRKTGGLADTVVD 407          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_ANATD (Glycogen synthase OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=glgA PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.011e-35
Identity = 92/219 (42.01%), Postives = 127/219 (57.99%), Query Frame = 2
Query:   23 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIK--GIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVA--EGFTG 667
            I+++K GI+ SD V+TVS  YA E V     G  L  ++   G K  GI+NG+D + +NP TDK I V YD++T  + K   K  LQ  + LPV   I +IG + RL ++KG +++   I   +   VQ+++LG G    E+ L+Q    +P K      ++  LA  I AG+D  L+PS  EPCG+ QL AMRYG+VPIV  TGGL DTV     FTG
Sbjct:  198 ISFLKGGIIYSDKVVTVSRTYANE-VRTLSYGEGLHGLLSGIGEKLIGIINGIDYEVYNPATDKLIFVNYDSNTFENRKKENKFRLQQMLNLPVSDEIVLIGMVSRLTKEKGIELIERIINKLLTLPVQLVILGAGDYHYEQMLKQYAGAFPSKVSANICYSEELARKIYAGSDMYLMPSLTEPCGISQLIAMRYGSVPIVRETGGLKDTVKPYNQFTG 415          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_TRIEI (Glycogen synthase OS=Trichodesmium erythraeum (strain IMS101) GN=glgA PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.321e-35
Identity = 91/212 (42.92%), Postives = 129/212 (60.85%), Query Frame = 2
Query:   26 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRK-TG-IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVA 652
            N M A +  +D V TVSP YA ++ +    G  LD ++   TG + GI+NG+D+  +NP  D+YI   YD +T ++ +   K ALQ EVG  V++N  ++G + RL EQKG D++   +  F+   + Q I+LGTG +  E Q+ Q+   YP +       N  L+  I AG D  L+PSRFEPCG+ QL AMRYG++PIV  TGGLVDTV+
Sbjct:  178 NTMAAAVQFADRVTTVSPTYASQIQTPA-YGENLDGLMSFITGKLHGILNGIDMNFYNPANDRYIPQTYDVNT-LEKRVDNKIALQEEVGFEVNKNSFLMGMVSRLVEQKGLDLMLQVLDRFMAYTDTQFILLGTGDRFYETQMWQIASRYPGRMSVQLLHNDALSRRIYAGTDAFLMPSRFEPCGISQLLAMRYGSIPIVRRTGGLVDTVS 387          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_MARAV (Glycogen synthase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=glgA PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.321e-35
Identity = 85/212 (40.09%), Postives = 129/212 (60.85%), Query Frame = 2
Query:   20 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIR--KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 649
            +++++K G++ SD + TVSP YA E+ +    G  LD ++R   + + GI+NG+D ++WNP  D ++   Y A    + K   +  LQ E+GL V    P++GF+GRL EQKG D L   I   ++   Q  +LG+G+   ++ L+ +   +P +      +N  LAH I AGAD  L+PSRFEPCGL Q++++RYGTVP+V   GGL DTV
Sbjct:  201 QLSFIKGGLVFSDAITTVSPSYADEIQTPWF-GNGLDGLLRHKSSRLHGILNGIDTRQWNPEADPHLEFHYGADYPAN-KSQCQARLQQELGLEVC-GAPLLGFVGRLVEQKGLDWLLGVIKPLLERGCQFALLGSGEHHYQESLKAMVREWPGQCSLTLGYNEGLAHRITAGADIFLMPSRFEPCGLNQMYSLRYGTVPVVHGVGGLNDTV 409          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_CHLTE (Glycogen synthase OS=Chlorobium tepidum GN=glgA PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.321e-35
Identity = 77/214 (35.98%), Postives = 127/214 (59.35%), Query Frame = 2
Query:   20 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIK--GIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE 655
            ++N +  GI  +D+V T S  YA++L+   +    +D  ++  G +  GI+NGMD ++WNP +DK I  +Y A    + K   K+ L  EVGLP     PV+G IG  ++ +G++I+ A++   ++ ++Q+IV G+G K  ++ L++      EK     +F     H +IAG D +L+ SR E CG++Q+ AM YGTVP+  + GG+VDT+ E
Sbjct:  210 EVNLLATGIKHADLVTTTSDRYARQLLDDPELSFGMDKALKACGDRFHGILNGMDTRQWNPSSDKLIKKRYSAEQP-EMKLEDKKVLLEEVGLPFSEETPVVGVIGSFDQYQGAEIVKASLAKLLELDIQLIVFGSGDKEFDQALKETAEENEEKMAFRPEFTDAFYHQMIAGLDILLMTSRIEACGMMQMFAMNYGTVPVAYAGGGIVDTIEE 422          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_PROMA (Glycogen synthase OS=Prochlorococcus marinus GN=glgA PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.725e-35
Identity = 86/209 (41.15%), Postives = 132/209 (63.16%), Query Frame = 2
Query:   32 MKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 649
            M A +L +D V  VSP Y++E+ + E  G  L+ ++      ++GI+NG+D+ EW+P TDK +   + +S  M  +   KEALQ ++GL V+ +  ++G +GRL +QKG D+L       +   + QI+VLGTG + +E  L +L I +P +      ++  L+ +I AG+D  L+PSRFEPCG+ QL AMRYG++PIV + GGLVDTV
Sbjct:  180 MAAAMLFADRVNAVSPTYSREIRTSE-YGESLEGLLNYISGKLRGILNGIDLDEWDPATDKALPANF-SSGKMSTRKKNKEALQRQMGLEVNNDKYLLGMVGRLVDQKGVDLLLQVSRRLLAYTDSQIVVLGTGDQILESALWELAIDHPGRFAVFLTYDDYLSRLIYAGSDAFLMPSRFEPCGISQLLAMRYGSIPIVRNVGGLVDTV 386          
The following BLAST results are available for this feature:
BLAST of FC868653 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 364
Match NameE-valueIdentityDescription
GLGA_PROMT1.011e-3539.71Glycogen synthase OS=Prochlorococcus marinus (stra... [more]
GLGA_PROMM1.011e-3540.67Glycogen synthase OS=Prochlorococcus marinus (stra... [more]
GLGA_PROM11.011e-3539.71Glycogen synthase OS=Prochlorococcus marinus (stra... [more]
GLGA_PECCP1.011e-3538.14Glycogen synthase OS=Pectobacterium carotovorum su... [more]
GLGA_HAEIN1.011e-3538.14Glycogen synthase OS=Haemophilus influenzae GN=glg... [more]
GLGA_ANATD1.011e-3542.01Glycogen synthase OS=Anaerocellum thermophilum (st... [more]
GLGA_TRIEI1.321e-3542.92Glycogen synthase OS=Trichodesmium erythraeum (str... [more]
GLGA_MARAV1.321e-3540.09Glycogen synthase OS=Marinobacter aquaeolei (strai... [more]
GLGA_CHLTE1.321e-3535.98Glycogen synthase OS=Chlorobium tepidum GN=glgA PE... [more]
GLGA_PROMA1.725e-3541.15Glycogen synthase OS=Prochlorococcus marinus GN=gl... [more]

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Properties
Property NameValue
Genbank descriptionC31003B03EF AbioticL1 Citrus clementina cDNA clone C31003B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868653 ID=FC868653; Name=FC868653; organism=Citrus clementina; type=EST; length=713bp
ATAAACCTGTGAGAGGATCAAAATCAACTGGATGAAAGCTGGAATATTAG
AATCAGACATGGTCTTAACTGTGAGCCCACACTATGCCCAAGAACTTGTT
TCTGGTGAAGACAAAGGAGTAGAATTGGATAACATCATCCGTAAAACTGG
CATTAAGGGAATTGTGAACGGGATGGATGTCCAGGAGTGGAACCCCTTGA
CTGACAAATATATAGGTGTCAAATATGATGCTTCAACTGTGATGGATGCG
AAGCCTCTTCTGAAGGAAGCCCTCCAAGCAGAAGTTGGGTTGCCTGTCGA
TAGAAATATTCCTGTCATAGGCTTCATTGGTAGACTTGAAGAGCAGAAAG
GCTCAGATATTCTTGCAGCTGCCATTCCCCATTTCATCAAAGAGAATGTT
CAGATAATAGTCCTTGGTACTGGCAAAAAACCAATGGAGAAGCAGCTTGA
ACAGTTGGAGATACTGTACCCTGAGAAAGCCAGAGGAGTAGCGAAATTCA
ATATTCCTCTGGCGCATATGATAATAGCAGGAGCTGATTTTATTTTGATT
CCAAGCAGATTTGAACCTTGTGGTCTCATTCAATTACATGCCATGCGTTA
TGGAACCGTACCTATCGTGGCTTCCACTGGTGGTTTGGTTGACACTGTGG
CAGAAGGCTTTACAGGATTCCAGATGGGAAGCTTCAGTGTTGACTGTGAG
GCTGTGGATCCAG
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