FC868653

Overview
NameFC868653
Unique NameFC868653
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length713
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_EDWI9 (Glycogen synthase OS=Edwardsiella ictaluri (strain 93-146) GN=glgA PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.725e-35
Identity = 85/213 (39.91%), Postives = 128/213 (60.09%), Query Frame = 2
Query:   20 KINWMKAGILESDMVLTVSPHYAQELVSGEDK-GVE--LDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 649
            +I++MKAG+  +D V TVSP YAQE+   E   G+E  L    R+  + GI+NG+D   WNP +D  I   Y   T+ D K   K  LQ  +GL V+ + P+   + RL +QKG D+L AA+P  ++   Q+ +LG G   +++    +   +P +      ++   +H I+AGAD I++PSRFEPCGL QL+ ++YG++P+V  TGGL DTV
Sbjct:  194 QISFMKAGLYYADHVTTVSPTYAQEITHPEFAYGMEGLLQWRAREGTLSGILNGVDDTIWNPASDALIARTYRRETLRD-KAENKLHLQTAMGLEVNADKPLFAVVSRLTDQKGLDLLLAALPTLLEGGAQLALLGAGDAQLQEAFLAVAAEHPGQVGVQIGYHEAFSHRIMAGADVIVVPSRFEPCGLTQLYGLKYGSLPLVRHTGGLADTV 405          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_ECOUT (Glycogen synthase OS=Escherichia coli (strain UTI89 / UPEC) GN=glgA PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.253e-35
Identity = 79/215 (36.74%), Postives = 128/215 (59.53%), Query Frame = 2
Query:   20 KINWMKAGILESDMVLTVSPHYAQELVSGEDK-GVE--LDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE 655
            +I+++KAG+  +D +  VSP YA+E+   +   G+E  L    R+  + G++NG+D + W+P TD  +  +Y   T+ D K   K  LQ  +GL VD  +P+   + RL  QKG D++  A+P  +++  Q+ +LG G   +++        YP +      ++   +H I+ GAD IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV++
Sbjct:  194 QISFLKAGLYYADHITAVSPTYAREITEPQFAYGIEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLED-KAENKRQLQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSD 407          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_YERE8 (Glycogen synthase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=glgA PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.943e-35
Identity = 81/216 (37.50%), Postives = 126/216 (58.33%), Query Frame = 2
Query:   20 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG----IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE 655
            +I+++KAG+  +D V TVSP YA+E+      G  ++ ++++      + GI+NG+D   W+P TD  +  +YDA   +  K + K  LQ  +GL V    P+   + RL EQKG D++  A+P  ++   Q+ VLG G   +++        Y  +      ++   +H IIAGAD IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV +
Sbjct:  194 QISYLKAGLFFADHVTTVSPTYAKEITQPAF-GYGMEGLLQERASQGRLTGILNGVDSDIWDPQTDTLLHARYDAED-LQKKAVNKTHLQTTMGLEVTEKKPIFAVVSRLTEQKGLDLVLEALPDLLQLGGQLAVLGAGDAILQEAFLAAAADYSGQVGVQIGYHEAFSHRIIAGADVILVPSRFEPCGLTQLYGLKYGTLPLVRHTGGLADTVVD 407          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_VIBFM (Glycogen synthase OS=Vibrio fischeri (strain MJ11) GN=glgA PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.943e-35
Identity = 82/225 (36.44%), Postives = 133/225 (59.11%), Query Frame = 2
Query:   23 INWMKAGILESDMVLTVSPHYAQELVSG-EDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTV--MDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV------AEGFTGF 670
            ++ +KAG+  +D +  VSP+YA+EL++     G+  D   R++ + GI+NG D  EWNP  D YI  ++  + +  +  K   K ALQ EV LP  +++ + G + RL  QKG   L   +  F+K ++Q++++GTG   +  +L ++   + +K   +  ++  LAH + AG+DF ++PS FEPCGL Q+++M YGT+PIV   GGL D+V       E  TGF
Sbjct:  205 VSMLKAGVQCADKINAVSPNYAKELLTELGSHGMASDFQDRESDLIGILNGCDYSEWNPEKDSYIPKQFKVNRISMVRGKKACKAALQQEVSLP-QKDVAMYGMVCRLTNQKGIQYLLPILEQFLKNDLQLVIVGTGDPVLAARLTEIAQEHSDKFAFIEAYDNKLAHWVEAGSDFFIMPSEFEPCGLNQIYSMAYGTLPIVREVGGLKDSVNNYDDDIENATGF 428          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_SHIDS (Glycogen synthase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=glgA PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.943e-35
Identity = 79/215 (36.74%), Postives = 128/215 (59.53%), Query Frame = 2
Query:   20 KINWMKAGILESDMVLTVSPHYAQELVSGEDK-GVE--LDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE 655
            +I+++KAG+  +D +  VSP YA+E+   +   G+E  L    R+  + G++NG+D + W+P TD  +  +Y   T+ D K   K  LQ  +GL VD  +P+   + RL  QKG D++  A+P  +++  Q+ +LG G   +++        YP +      ++   +H I+ GAD IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV++
Sbjct:  194 QISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLED-KAKNKRQLQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSD 407          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_HAES1 (Glycogen synthase OS=Haemophilus somnus (strain 129Pt) GN=glgA PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.943e-35
Identity = 83/215 (38.60%), Postives = 129/215 (60.00%), Query Frame = 2
Query:   20 KINWMKAGILESDMVLTVSPHYAQELVSGEDK-GVE--LDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE 655
            +++++KAG+  SD+   VSP YA+E+ + E   G++  L  +  +  + GI+NG+D + W+P +D YI   Y   + M  K   K  LQA   LP + N  +   + RL EQKG D+L  +    +++  Q+ +LG+G   +E  +  L   YPE       ++  L+H++IAG D IL+PSRFEPCGL QL+ ++YGT+P+V STGGL DTV +
Sbjct:  194 EMSYLKAGLYYSDISTAVSPTYAKEITTPEFAYGLQGLLQTLKAQGRLVGILNGVDEKIWHPYSDPYIEDHYKLKS-MQGKRKNKIKLQAYFNLPQNPNALLFVMVTRLTEQKGVDLLIGSAERIVQQGGQLAILGSGSAHLEAGINWLAQEYPENIAVKIGYDEALSHLMIAGGDVILVPSRFEPCGLTQLYGLKYGTLPLVRSTGGLADTVID 407          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_SHISS (Glycogen synthase OS=Shigella sonnei (strain Ss046) GN=glgA PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.843e-35
Identity = 79/215 (36.74%), Postives = 128/215 (59.53%), Query Frame = 2
Query:   20 KINWMKAGILESDMVLTVSPHYAQELVSGEDK-GVE--LDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE 655
            +I+++KAG+  +D +  VSP YA+E+   +   G+E  L    R+  + G++NG+D + W+P TD  +  +Y   T+ D K   K  LQ  +GL VD  +P+   + RL  QKG D++  A+P  +++  Q+ +LG G   +++        YP +      ++   +H I+ GAD IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV++
Sbjct:  194 QISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLED-KAENKRQLQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSD 407          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_SHIFL (Glycogen synthase OS=Shigella flexneri GN=glgA PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.843e-35
Identity = 79/215 (36.74%), Postives = 128/215 (59.53%), Query Frame = 2
Query:   20 KINWMKAGILESDMVLTVSPHYAQELVSGEDK-GVE--LDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE 655
            +I+++KAG+  +D +  VSP YA+E+   +   G+E  L    R+  + G++NG+D + W+P TD  +  +Y   T+ D K   K  LQ  +GL VD  +P+   + RL  QKG D++  A+P  +++  Q+ +LG G   +++        YP +      ++   +H I+ GAD IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV++
Sbjct:  194 QISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLED-KAENKSQLQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSD 407          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_SHIF8 (Glycogen synthase OS=Shigella flexneri serotype 5b (strain 8401) GN=glgA PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.843e-35
Identity = 79/215 (36.74%), Postives = 128/215 (59.53%), Query Frame = 2
Query:   20 KINWMKAGILESDMVLTVSPHYAQELVSGEDK-GVE--LDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE 655
            +I+++KAG+  +D +  VSP YA+E+   +   G+E  L    R+  + G++NG+D + W+P TD  +  +Y   T+ D K   K  LQ  +GL VD  +P+   + RL  QKG D++  A+P  +++  Q+ +LG G   +++        YP +      ++   +H I+ GAD IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV++
Sbjct:  194 QISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLED-KAENKSQLQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSD 407          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_SHIBS (Glycogen synthase OS=Shigella boydii serotype 4 (strain Sb227) GN=glgA PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.843e-35
Identity = 79/215 (36.74%), Postives = 128/215 (59.53%), Query Frame = 2
Query:   20 KINWMKAGILESDMVLTVSPHYAQELVSGEDK-GVE--LDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE 655
            +I+++KAG+  +D +  VSP YA+E+   +   G+E  L    R+  + G++NG+D + W+P TD  +  +Y   T+ D K   K  LQ  +GL VD  +P+   + RL  QKG D++  A+P  +++  Q+ +LG G   +++        YP +      ++   +H I+ GAD IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV++
Sbjct:  194 QISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLED-KAENKRQLQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSD 407          
The following BLAST results are available for this feature:
BLAST of FC868653 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 364
Match NameE-valueIdentityDescription
GLGA_EDWI91.725e-3539.91Glycogen synthase OS=Edwardsiella ictaluri (strain... [more]
GLGA_ECOUT2.253e-3536.74Glycogen synthase OS=Escherichia coli (strain UTI8... [more]
GLGA_YERE82.943e-3537.50Glycogen synthase OS=Yersinia enterocolitica serot... [more]
GLGA_VIBFM2.943e-3536.44Glycogen synthase OS=Vibrio fischeri (strain MJ11)... [more]
GLGA_SHIDS2.943e-3536.74Glycogen synthase OS=Shigella dysenteriae serotype... [more]
GLGA_HAES12.943e-3538.60Glycogen synthase OS=Haemophilus somnus (strain 12... [more]
GLGA_SHISS3.843e-3536.74Glycogen synthase OS=Shigella sonnei (strain Ss046... [more]
GLGA_SHIFL3.843e-3536.74Glycogen synthase OS=Shigella flexneri GN=glgA PE=... [more]
GLGA_SHIF83.843e-3536.74Glycogen synthase OS=Shigella flexneri serotype 5b... [more]
GLGA_SHIBS3.843e-3536.74Glycogen synthase OS=Shigella boydii serotype 4 (s... [more]

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Properties
Property NameValue
Genbank descriptionC31003B03EF AbioticL1 Citrus clementina cDNA clone C31003B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868653 ID=FC868653; Name=FC868653; organism=Citrus clementina; type=EST; length=713bp
ATAAACCTGTGAGAGGATCAAAATCAACTGGATGAAAGCTGGAATATTAG
AATCAGACATGGTCTTAACTGTGAGCCCACACTATGCCCAAGAACTTGTT
TCTGGTGAAGACAAAGGAGTAGAATTGGATAACATCATCCGTAAAACTGG
CATTAAGGGAATTGTGAACGGGATGGATGTCCAGGAGTGGAACCCCTTGA
CTGACAAATATATAGGTGTCAAATATGATGCTTCAACTGTGATGGATGCG
AAGCCTCTTCTGAAGGAAGCCCTCCAAGCAGAAGTTGGGTTGCCTGTCGA
TAGAAATATTCCTGTCATAGGCTTCATTGGTAGACTTGAAGAGCAGAAAG
GCTCAGATATTCTTGCAGCTGCCATTCCCCATTTCATCAAAGAGAATGTT
CAGATAATAGTCCTTGGTACTGGCAAAAAACCAATGGAGAAGCAGCTTGA
ACAGTTGGAGATACTGTACCCTGAGAAAGCCAGAGGAGTAGCGAAATTCA
ATATTCCTCTGGCGCATATGATAATAGCAGGAGCTGATTTTATTTTGATT
CCAAGCAGATTTGAACCTTGTGGTCTCATTCAATTACATGCCATGCGTTA
TGGAACCGTACCTATCGTGGCTTCCACTGGTGGTTTGGTTGACACTGTGG
CAGAAGGCTTTACAGGATTCCAGATGGGAAGCTTCAGTGTTGACTGTGAG
GCTGTGGATCCAG
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