FC868653

Overview
NameFC868653
Unique NameFC868653
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length713
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_ROSDO (Glycogen synthase OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=glgA PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.843e-35
Identity = 79/213 (37.09%), Postives = 122/213 (57.28%), Query Frame = 2
Query:   23 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE 655
            + ++KAG+  +D + TVSP YA+E++  E  G+ L+ ++R     + GI+NG+D   WNP TD  +   Y     + AK   ++A+    GL    N P+   I RL  QKG D+L   +P  +     + VLG+G + +E         +P     +  ++  L+H++  G+D ILIPSRFEPCGL QL+ +RYGT+P+VA TGGL DT+ +
Sbjct:  197 LGFLKAGLAFADKITTVSPTYAREIMQPEF-GMGLEGLLRARARDVSGILNGIDTDVWNPETDPALPKSYSLKG-LKAKQQSRQAVLERFGLTPPDNAPLFCVISRLTTQKGVDVLLDVVPDLVARGAGLAVLGSGDRDLEAAFVAAAHRFPGAVGVIIGYDEDLSHLMQGGSDAILIPSRFEPCGLTQLYGLRYGTIPVVARTGGLADTIID 407          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_HAEI8 (Glycogen synthase OS=Haemophilus influenzae (strain 86-028NP) GN=glgA PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.843e-35
Identity = 81/215 (37.67%), Postives = 126/215 (58.60%), Query Frame = 2
Query:   20 KINWMKAGILESDMVLTVSPHYAQELVSGEDK-GVE--LDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE 655
            +I+++K+G+  SD    VSP YA+E+ + E   G++  L  +  +  + GI+NG+D   W+P  D+YI   Y     M  K   K  LQA   LP D +      + RL EQKG D+L  +    +K+  Q+++LG+G    E+ + +L   YP+       ++  L+H+++AG D IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV +
Sbjct:  194 QISYLKSGLFYSDASTAVSPTYAEEITTPEFAYGLQGLLSGLKAQGRLVGILNGVDENIWHPNVDQYIPHHYKLK-YMAGKKKNKAELQAYFNLPQDESALAFVMVTRLTEQKGVDLLIESADEIVKQGGQLMILGSGAPHFEQGIRELAERYPQNIAVKIGYDEALSHLMVAGGDVILVPSRFEPCGLTQLYGLQYGTLPLVRKTGGLADTVVD 407          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_ECOSM (Glycogen synthase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=glgA PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.843e-35
Identity = 79/215 (36.74%), Postives = 128/215 (59.53%), Query Frame = 2
Query:   20 KINWMKAGILESDMVLTVSPHYAQELVSGEDK-GVE--LDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE 655
            +I+++KAG+  +D +  VSP YA+E+   +   G+E  L    R+  + G++NG+D + W+P TD  +  +Y   T+ D K   K  LQ  +GL VD  +P+   + RL  QKG D++  A+P  +++  Q+ +LG G   +++        YP +      ++   +H I+ GAD IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV++
Sbjct:  194 QISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLED-KAENKRQLQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSD 407          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_ECOSE (Glycogen synthase OS=Escherichia coli (strain SE11) GN=glgA PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.843e-35
Identity = 79/215 (36.74%), Postives = 128/215 (59.53%), Query Frame = 2
Query:   20 KINWMKAGILESDMVLTVSPHYAQELVSGEDK-GVE--LDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE 655
            +I+++KAG+  +D +  VSP YA+E+   +   G+E  L    R+  + G++NG+D + W+P TD  +  +Y   T+ D K   K  LQ  +GL VD  +P+   + RL  QKG D++  A+P  +++  Q+ +LG G   +++        YP +      ++   +H I+ GAD IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV++
Sbjct:  194 QISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLED-KAENKRQLQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSD 407          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_ECOLU (Glycogen synthase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=glgA PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.843e-35
Identity = 79/215 (36.74%), Postives = 128/215 (59.53%), Query Frame = 2
Query:   20 KINWMKAGILESDMVLTVSPHYAQELVSGEDK-GVE--LDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE 655
            +I+++KAG+  +D +  VSP YA+E+   +   G+E  L    R+  + G++NG+D + W+P TD  +  +Y   T+ D K   K  LQ  +GL VD  +P+   + RL  QKG D++  A+P  +++  Q+ +LG G   +++        YP +      ++   +H I+ GAD IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV++
Sbjct:  194 QISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLED-KAENKRQLQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSD 407          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_ECOLI (Glycogen synthase OS=Escherichia coli (strain K12) GN=glgA PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.843e-35
Identity = 79/215 (36.74%), Postives = 128/215 (59.53%), Query Frame = 2
Query:   20 KINWMKAGILESDMVLTVSPHYAQELVSGEDK-GVE--LDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE 655
            +I+++KAG+  +D +  VSP YA+E+   +   G+E  L    R+  + G++NG+D + W+P TD  +  +Y   T+ D K   K  LQ  +GL VD  +P+   + RL  QKG D++  A+P  +++  Q+ +LG G   +++        YP +      ++   +H I+ GAD IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV++
Sbjct:  194 QISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLED-KAENKRQLQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSD 407          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_ECOLC (Glycogen synthase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=glgA PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.843e-35
Identity = 79/215 (36.74%), Postives = 128/215 (59.53%), Query Frame = 2
Query:   20 KINWMKAGILESDMVLTVSPHYAQELVSGEDK-GVE--LDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE 655
            +I+++KAG+  +D +  VSP YA+E+   +   G+E  L    R+  + G++NG+D + W+P TD  +  +Y   T+ D K   K  LQ  +GL VD  +P+   + RL  QKG D++  A+P  +++  Q+ +LG G   +++        YP +      ++   +H I+ GAD IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV++
Sbjct:  194 QISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLED-KAENKRQLQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSD 407          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_ECOL6 (Glycogen synthase OS=Escherichia coli O6 GN=glgA PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.843e-35
Identity = 79/215 (36.74%), Postives = 128/215 (59.53%), Query Frame = 2
Query:   20 KINWMKAGILESDMVLTVSPHYAQELVSGEDK-GVE--LDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE 655
            +I+++KAG+  +D +  VSP YA+E+   +   G+E  L    R+  + G++NG+D + W+P TD  +  +Y   T+ D K   K  LQ  +GL VD  +P+   + RL  QKG D++  A+P  +++  Q+ +LG G   +++        YP +      ++   +H I+ GAD IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV++
Sbjct:  194 QISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLED-KAENKRQLQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSD 407          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_ECOL5 (Glycogen synthase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=glgA PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.843e-35
Identity = 79/215 (36.74%), Postives = 128/215 (59.53%), Query Frame = 2
Query:   20 KINWMKAGILESDMVLTVSPHYAQELVSGEDK-GVE--LDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE 655
            +I+++KAG+  +D +  VSP YA+E+   +   G+E  L    R+  + G++NG+D + W+P TD  +  +Y   T+ D K   K  LQ  +GL VD  +P+   + RL  QKG D++  A+P  +++  Q+ +LG G   +++        YP +      ++   +H I+ GAD IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV++
Sbjct:  194 QISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLED-KAENKRQLQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSD 407          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_ECOK1 (Glycogen synthase OS=Escherichia coli O1:K1 / APEC GN=glgA PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.843e-35
Identity = 79/215 (36.74%), Postives = 128/215 (59.53%), Query Frame = 2
Query:   20 KINWMKAGILESDMVLTVSPHYAQELVSGEDK-GVE--LDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE 655
            +I+++KAG+  +D +  VSP YA+E+   +   G+E  L    R+  + G++NG+D + W+P TD  +  +Y   T+ D K   K  LQ  +GL VD  +P+   + RL  QKG D++  A+P  +++  Q+ +LG G   +++        YP +      ++   +H I+ GAD IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV++
Sbjct:  194 QISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLED-KAENKRQLQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSD 407          
The following BLAST results are available for this feature:
BLAST of FC868653 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 364
Match NameE-valueIdentityDescription
GLGA_ROSDO3.843e-3537.09Glycogen synthase OS=Roseobacter denitrificans (st... [more]
GLGA_HAEI83.843e-3537.67Glycogen synthase OS=Haemophilus influenzae (strai... [more]
GLGA_ECOSM3.843e-3536.74Glycogen synthase OS=Escherichia coli (strain SMS-... [more]
GLGA_ECOSE3.843e-3536.74Glycogen synthase OS=Escherichia coli (strain SE11... [more]
GLGA_ECOLU3.843e-3536.74Glycogen synthase OS=Escherichia coli O17:K52:H18 ... [more]
GLGA_ECOLI3.843e-3536.74Glycogen synthase OS=Escherichia coli (strain K12)... [more]
GLGA_ECOLC3.843e-3536.74Glycogen synthase OS=Escherichia coli (strain ATCC... [more]
GLGA_ECOL63.843e-3536.74Glycogen synthase OS=Escherichia coli O6 GN=glgA P... [more]
GLGA_ECOL53.843e-3536.74Glycogen synthase OS=Escherichia coli O6:K15:H31 (... [more]
GLGA_ECOK13.843e-3536.74Glycogen synthase OS=Escherichia coli O1:K1 / APEC... [more]

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Properties
Property NameValue
Genbank descriptionC31003B03EF AbioticL1 Citrus clementina cDNA clone C31003B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868653 ID=FC868653; Name=FC868653; organism=Citrus clementina; type=EST; length=713bp
ATAAACCTGTGAGAGGATCAAAATCAACTGGATGAAAGCTGGAATATTAG
AATCAGACATGGTCTTAACTGTGAGCCCACACTATGCCCAAGAACTTGTT
TCTGGTGAAGACAAAGGAGTAGAATTGGATAACATCATCCGTAAAACTGG
CATTAAGGGAATTGTGAACGGGATGGATGTCCAGGAGTGGAACCCCTTGA
CTGACAAATATATAGGTGTCAAATATGATGCTTCAACTGTGATGGATGCG
AAGCCTCTTCTGAAGGAAGCCCTCCAAGCAGAAGTTGGGTTGCCTGTCGA
TAGAAATATTCCTGTCATAGGCTTCATTGGTAGACTTGAAGAGCAGAAAG
GCTCAGATATTCTTGCAGCTGCCATTCCCCATTTCATCAAAGAGAATGTT
CAGATAATAGTCCTTGGTACTGGCAAAAAACCAATGGAGAAGCAGCTTGA
ACAGTTGGAGATACTGTACCCTGAGAAAGCCAGAGGAGTAGCGAAATTCA
ATATTCCTCTGGCGCATATGATAATAGCAGGAGCTGATTTTATTTTGATT
CCAAGCAGATTTGAACCTTGTGGTCTCATTCAATTACATGCCATGCGTTA
TGGAACCGTACCTATCGTGGCTTCCACTGGTGGTTTGGTTGACACTGTGG
CAGAAGGCTTTACAGGATTCCAGATGGGAAGCTTCAGTGTTGACTGTGAG
GCTGTGGATCCAG
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