FC868653

Overview
NameFC868653
Unique NameFC868653
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length713
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_NOVAD (Glycogen synthase OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=glgA PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 7.248e-34
Identity = 82/213 (38.50%), Postives = 122/213 (57.28%), Query Frame = 2
Query:   23 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE 655
            + ++KAG+  +  + TVSP YA+E+ + E  G+ L+ ++   G  + GIVNG+D  +WNP TD  +  ++   ++   +   K AL+AE  L  D   P+   I RL  QKG D+L   I H +    ++ +LG+G K ME         +P K      ++  L+H + AG D IL+PSRFEPCGL QL+ + YG VP+VA TGGL DTV +
Sbjct:  202 VGYLKAGLEAASAITTVSPTYAREIRTPEF-GMGLEGLVVSRGNRVSGIVNGIDTAQWNPETDPALAARFGVKSLA-RRVTNKRALEAEFALEADDG-PLFVVITRLTWQKGIDVLLECIDHLVGIGGRLALLGSGDKAMENAFHAAATRHPGKVGVRIGYDEALSHRMQAGGDAILVPSRFEPCGLTQLYGLAYGCVPVVARTGGLADTVID 411          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_LEPBP (Glycogen synthase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=glgA PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 7.248e-34
Identity = 91/221 (41.18%), Postives = 119/221 (53.85%), Query Frame = 2
Query:   20 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLP-VDRNIPVIGFIGRLEEQKGSDILAAA------IPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE 655
            K N+MKAGIL +  + TVSP Y +E +  E  G  L  ++  RK    GI+NG+D  EWNP  DK I   Y      + K   KE L  E+G P V  ++P+IG IGRL  QKG      A      +PH      + +VLG+G    E     L  + P+       +N  LAH I A +DF L+PS FEPCGL Q+++  YGT+PIV+  GGL DTV E
Sbjct:  194 KCNYMKAGILSAGQITTVSPGYREETLR-EPNGFGLSYVLKKRKADYTGILNGIDPDEWNPKVDKRIFQTYHLQNWKEGKRKNKEHLYREIGRPNVSLDLPLIGLIGRLTYQKGFPTFLQAFLERRHLPH------RYVVLGSGDPETENAFFHLSDMMPDVFYFYKGYNESLAHQIEAASDFFLMPSLFEPCGLNQMYSHVYGTIPIVSRVGGLRDTVDE 407          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_LEPBA (Glycogen synthase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=glgA PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 7.248e-34
Identity = 91/221 (41.18%), Postives = 119/221 (53.85%), Query Frame = 2
Query:   20 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLP-VDRNIPVIGFIGRLEEQKGSDILAAA------IPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE 655
            K N+MKAGIL +  + TVSP Y +E +  E  G  L  ++  RK    GI+NG+D  EWNP  DK I   Y      + K   KE L  E+G P V  ++P+IG IGRL  QKG      A      +PH      + +VLG+G    E     L  + P+       +N  LAH I A +DF L+PS FEPCGL Q+++  YGT+PIV+  GGL DTV E
Sbjct:  194 KCNYMKAGILSAGQITTVSPGYREETLR-EPNGFGLSYVLKKRKADYTGILNGIDPDEWNPKVDKRIFQTYHLQNWKEGKRKNKEHLYREIGRPNVSLDLPLIGLIGRLTYQKGFPTFLQAFLERRHLPH------RYVVLGSGDPETENAFFHLSDMMPDVFYFYKGYNESLAHQIEAASDFFLMPSLFEPCGLNQMYSHVYGTIPIVSRVGGLRDTVDE 407          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_CHLCV (Glycogen synthase OS=Chlamydophila caviae GN=glgA PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 7.248e-34
Identity = 88/224 (39.29%), Postives = 129/224 (57.59%), Query Frame = 2
Query:   32 MKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII-RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL-------KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKP-MEKQLEQLE--ILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAEGFTGF 670
            +K  +  SD + TVSP YAQE+++        D I+ R+    GI+NG+D Q WNP TD  + V Y +  ++DA  +L       K AL  ++GL  + + P++  I R+ EQKG + + AAI H ++    ++++GT   P ++++   L+  +      R +  +N PLA ++   AD I IPS FEPCGL QL  MRYGTVP+V STGGL DTV  G  GF
Sbjct:  196 LKGALYCSDYITTVSPTYAQEILNDYSDYEMHDAIMARRHVFCGILNGIDEQIWNPETDASLAVNY-SKDLLDAPDVLFTKKEENKNALYEKLGLSYEYS-PLMCIISRIVEQKGPEFMKAAILHAMENGYALVIVGTCYDPEIQRKFTNLQESLTTSPNIRIILDYNDPLARLVYGAADMICIPSHFEPCGLTQLIGMRYGTVPLVRSTGGLADTVVTGINGF 417          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_XANOP (Glycogen synthase OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=glgA PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 9.466e-34
Identity = 83/229 (36.24%), Postives = 130/229 (56.77%), Query Frame = 2
Query:   20 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKG----IVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAEGFTGFQMGSFSVD 694
            ++++++ GI+ +D V TVS  YA++ ++G  +G  LD ++     KG    IVNG+D   W+P TD+Y+   +  +     +    +  +A  GL      P+   + RL  QKG D++    P  +    QI V+G G+  +E+Q+ +L   YP +      F   LA  + AGADF+L+PSRFEPCGL Q++A R+G +PI  +TGGL+DTV +G TGF     SV+
Sbjct:  227 QMSFLRGGIVNADHVNTVSVSYAKQ-ITGPAQGCGLDRLLAGRAAKGVLTGIVNGIDAS-WDPRTDEYLDSHFSVNQWQGRQDNAAQVRKA-FGLRESTG-PLFAVVSRLVHQKGLDLICEVAPQIVAAGGQIAVIGGGEPDIERQVAELTRRYPGQVGAFIGFEEGLARRMFAGADFLLMPSRFEPCGLSQMYAQRFGCLPIAHATGGLIDTVDDGVTGFLFQHASVE 451          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_SALTI (Glycogen synthase OS=Salmonella typhi GN=glgA PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 9.466e-34
Identity = 74/216 (34.26%), Postives = 130/216 (60.19%), Query Frame = 2
Query:   20 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKG----IVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE 655
            +++++KAG+  +D +  VSP YA+E+   +     ++ ++R+  ++G    I+NG+D + WNP +D  +  +Y   T ++ K   K  LQ  +GL V+  +P+   + RL  QKG D++  A+P  +++  Q+ +LG G   +++        +P +A     ++   +H I+ GAD IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV++
Sbjct:  194 QLSFLKAGLYYADHITAVSPTYAREITEPQF-AYGMEGLLRQRHLEGRLSGILNGVDEKIWNPESDLLLASRYTRDT-LEEKAENKRQLQIAMGLKVNDKVPLFAVVSRLTNQKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEHPGQAGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSD 407          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_AQUAE (Glycogen synthase OS=Aquifex aeolicus GN=glgA PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 9.466e-34
Identity = 86/213 (40.38%), Postives = 123/213 (57.75%), Query Frame = 2
Query:   23 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIK--GIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE 655
            +N+MK GI+ SD++ TVSP YA+E+ + ++ G  L+ +++K   K  GI+NG+D + WNP  DKYI   Y        K   KE L  E+G+  ++  P+I FI R   QKG +++        K N   + LGTG+   E     +  +Y +  +  A+FN   A  + A +DFIL+PS FEPCGL Q+  MRYG VPIV  TGGL DTV +
Sbjct:  191 VNFMKGGIVFSDLITTVSPTYAKEIQT-QEYGYGLEGVLKKYSYKLRGILNGIDYEVWNPEKDKYIYQNYSLRNY-SKKFKNKEFLSKELGIEAEK--PLISFINRFTHQKGVELILNCAEEMSKLNANFVFLGTGE--YENAFLDVSKIY-KNFKVFAEFNEGFARKLYASSDFILMPSYFEPCGLTQMIGMRYGCVPIVRKTGGLRDTVKD 396          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA1_RHIRD (Glycogen synthase 1 OS=Rhizobium radiobacter GN=glgA1 PE=1 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 9.466e-34
Identity = 82/213 (38.50%), Postives = 127/213 (59.62%), Query Frame = 2
Query:   23 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE 655
            ++++K G+  +  + TVSP YA+E+++ E  G+ L+ +I  R   + GIVNG+D   WNP TD  I   Y A+ + + + L K+A+     +  D + P+   I RL  QKG D++A A+   +    +++VLG G   +E  L      +  +      +N PL+H++ AG D I+IPSRFEPCGL QL+A+RYG +P+VA TGGL DTV +
Sbjct:  197 VSFLKGGLQTATALSTVSPSYAEEILTAEF-GMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKN-RALNKKAVAEHFRIDDDGS-PLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGDVALEGALLAAASRHHGRVGVAIGYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCIPVVARTGGLADTVID 406          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA1_AGRT5 (Glycogen synthase 1 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=glgA1 PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 9.466e-34
Identity = 82/213 (38.50%), Postives = 127/213 (59.62%), Query Frame = 2
Query:   23 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE 655
            ++++K G+  +  + TVSP YA+E+++ E  G+ L+ +I  R   + GIVNG+D   WNP TD  I   Y A+ + + + L K+A+     +  D + P+   I RL  QKG D++A A+   +    +++VLG G   +E  L      +  +      +N PL+H++ AG D I+IPSRFEPCGL QL+A+RYG +P+VA TGGL DTV +
Sbjct:  197 VSFLKGGLQTATALSTVSPSYAEEILTAEF-GMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKN-RALNKKAVAEHFRIDDDGS-PLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGDVALEGALLAAASRHHGRVGVAIGYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCIPVVARTGGLADTVID 406          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_NATTJ (Glycogen synthase OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=glgA PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.236e-33
Identity = 87/215 (40.47%), Postives = 130/215 (60.47%), Query Frame = 2
Query:   20 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTV--MDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 649
            +I+++K G++ SD + TVSP YA+E+ S E  G+ +D ++  R+  + GI+NG+D Q++NP TD  I   Y+       + K + K  LQ ++ LPV   +P+I FI RL +QKG D++   +P  ++ E VQ + LGTG    E+ L  L   +   +  + KF+  LA  I A +D  L+PS FEPCG+ Q  A+RYG+VPIV   GGL DTV
Sbjct:  200 QISFLKGGLIFSDAITTVSPTYAKEIQSPE-LGMGVDGLLHKRRDDLYGILNGIDYQDYNPKTDVNIYRNYNLPDEGKTNEKLINKLRLQEDLRLPVSSRVPLIAFINRLVKQKGLDLITYVLPELLESEEVQFVFLGTGDPHYEQYLSYLAEKHQNLSAQI-KFDEGLARKIYAASDLFLMPSLFEPCGIGQQIAIRYGSVPIVRKVGGLHDTV 412          
The following BLAST results are available for this feature:
BLAST of FC868653 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 364
Match NameE-valueIdentityDescription
GLGA_NOVAD7.248e-3438.50Glycogen synthase OS=Novosphingobium aromaticivora... [more]
GLGA_LEPBP7.248e-3441.18Glycogen synthase OS=Leptospira biflexa serovar Pa... [more]
GLGA_LEPBA7.248e-3441.18Glycogen synthase OS=Leptospira biflexa serovar Pa... [more]
GLGA_CHLCV7.248e-3439.29Glycogen synthase OS=Chlamydophila caviae GN=glgA ... [more]
GLGA_XANOP9.466e-3436.24Glycogen synthase OS=Xanthomonas oryzae pv. oryzae... [more]
GLGA_SALTI9.466e-3434.26Glycogen synthase OS=Salmonella typhi GN=glgA PE=3... [more]
GLGA_AQUAE9.466e-3440.38Glycogen synthase OS=Aquifex aeolicus GN=glgA PE=3... [more]
GLGA1_RHIRD9.466e-3438.50Glycogen synthase 1 OS=Rhizobium radiobacter GN=gl... [more]
GLGA1_AGRT59.466e-3438.50Glycogen synthase 1 OS=Agrobacterium tumefaciens (... [more]
GLGA_NATTJ1.236e-3340.47Glycogen synthase OS=Natranaerobius thermophilus (... [more]

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Properties
Property NameValue
Genbank descriptionC31003B03EF AbioticL1 Citrus clementina cDNA clone C31003B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868653 ID=FC868653; Name=FC868653; organism=Citrus clementina; type=EST; length=713bp
ATAAACCTGTGAGAGGATCAAAATCAACTGGATGAAAGCTGGAATATTAG
AATCAGACATGGTCTTAACTGTGAGCCCACACTATGCCCAAGAACTTGTT
TCTGGTGAAGACAAAGGAGTAGAATTGGATAACATCATCCGTAAAACTGG
CATTAAGGGAATTGTGAACGGGATGGATGTCCAGGAGTGGAACCCCTTGA
CTGACAAATATATAGGTGTCAAATATGATGCTTCAACTGTGATGGATGCG
AAGCCTCTTCTGAAGGAAGCCCTCCAAGCAGAAGTTGGGTTGCCTGTCGA
TAGAAATATTCCTGTCATAGGCTTCATTGGTAGACTTGAAGAGCAGAAAG
GCTCAGATATTCTTGCAGCTGCCATTCCCCATTTCATCAAAGAGAATGTT
CAGATAATAGTCCTTGGTACTGGCAAAAAACCAATGGAGAAGCAGCTTGA
ACAGTTGGAGATACTGTACCCTGAGAAAGCCAGAGGAGTAGCGAAATTCA
ATATTCCTCTGGCGCATATGATAATAGCAGGAGCTGATTTTATTTTGATT
CCAAGCAGATTTGAACCTTGTGGTCTCATTCAATTACATGCCATGCGTTA
TGGAACCGTACCTATCGTGGCTTCCACTGGTGGTTTGGTTGACACTGTGG
CAGAAGGCTTTACAGGATTCCAGATGGGAAGCTTCAGTGTTGACTGTGAG
GCTGTGGATCCAG
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