FC868653

Overview
NameFC868653
Unique NameFC868653
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length713
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_CHLL2 (Glycogen synthase OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=glgA PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.045e-32
Identity = 73/211 (34.60%), Postives = 119/211 (56.40%), Query Frame = 2
Query:   23 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 649
            +N +  G   +D++ T S  YA E+V        L  ++  RK+   GI+NG+D ++WNP TDK I  +Y A   ++ K   K+AL  E GLP     P+ G I   +  +G+++L  ++   ++ ++Q+I+ G+G K  EK  +     YPE+      +   L H+ IAG D +L+P R E CG++QL AM YGT+P+  + GG+V+T+
Sbjct:  211 VNMLYTGAEHADLLTTTSRLYADEIVGNGSDTYGLGTVVEERKSTFHGILNGIDTRQWNPSTDKLIKKRYAADR-LEGKLDNKKALLDEAGLPFTEGRPLAGIIIGFDAFQGAELLKESLVKLVELDMQLIICGSGDKEYEKYFQDFAAEYPEQVSVRTDYADTLLHLAIAGFDMLLMPGRIESCGMLQLFAMSYGTIPVAYAGGGIVETI 420          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_PROA2 (Glycogen synthase OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=glgA PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 5.194e-32
Identity = 71/213 (33.33%), Postives = 124/213 (58.22%), Query Frame = 2
Query:   23 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRK--TGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE 655
            +N +   +   D V T S  YA  L  G  +   LD +I K  +G+ GI NG+D ++WNP  DK I  K+D   + + K   K+ L  E G+ ++   P++G +   E  +GS++L  +I   ++ ++Q++V  +G K + ++L++    YPEK    ++F+  + H I+A +D +LIP+  E CG++QL A+ YG+VP+V + GG ++T+ E
Sbjct:  211 VNMLFTAVEHFDAVTTTSDAYAGMLADGRSEAFGLDRVIEKRASGLVGIANGLDAKQWNPAADKMIKKKFDIERLSE-KTENKKYLLEEFGMELEEATPLVGSVINAERFQGSELLMESIDGLMELDIQLVVSVSGDKELIRRLQEKAKAYPEKLAVYSEFSDAIFHQIMASSDLLLIPAEVESCGMMQLFAIAYGSVPVVYTAGGNIETIEE 422          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA2_METCA (Glycogen synthase 2 OS=Methylococcus capsulatus GN=glgA2 PE=3 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 5.194e-32
Identity = 85/225 (37.78%), Postives = 127/225 (56.44%), Query Frame = 2
Query:   23 INWMKAGILESDMVLTVSPHYAQELVS-GEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKP--------MEKQLEQ-----LEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE 655
            IN MK GI+ ++ V TVSP YA E    G+  G+E    I      G+VNG+D   WNP  D +I V ++  T+ + K   K+AL+  + L  D   P++ F+GRL+ QKG +++  A+ + + +  Q ++LG+            +++Q        LEI Y E+          LAH++ AG+D +++PSRFEPCGL QL AMRYGT+P+V   GGL DTV +
Sbjct:  202 INLMKGGIVYANFVTTVSPRYAMEAKDQGQGFGLEPTLHIHHMKYGGVVNGIDYDVWNPEIDPHIPVHFNVDTI-EGKYADKKALRDRL-LLADNEKPIVSFVGRLDPQKGIELIRHALFYTLGQGGQFVLLGSSPDGAINGYFWGLKRQFNDNPDCHLEIGYNEE----------LAHLVYAGSDVMVVPSRFEPCGLTQLIAMRYGTIPVVREIGGLADTVID 414          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_PROMP (Glycogen synthase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=glgA PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 6.784e-32
Identity = 80/209 (38.28%), Postives = 125/209 (59.81%), Query Frame = 2
Query:   32 MKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 649
            M A +L +D V  VSP YA E+ + E  G  L+ ++      ++GI+NG+D+ EW+P  DK +  +++    ++++   K  LQ E+GL V+    ++G + RL +QKG D++       +   + QI +LGTG + +E  L QL + YP +      ++  L+ +I  G+D  L+PSRFEPCG+ QL AMRYG++PIV   GGLVDTV
Sbjct:  180 MAAAMLYADRVNAVSPTYADEIKTHE-YGESLEGLLNYISGKLRGILNGIDLNEWDPDKDKVLPAQFNIKN-LESRLENKIILQKEMGLEVNSKKYLLGMVSRLVDQKGVDLVLQVSRRLLAYTDSQIAILGTGDRSLESGLWQLALDYPGRFSVFLTYDDSLSRLIYGGSDAFLMPSRFEPCGISQLLAMRYGSIPIVRRVGGLVDTV 386          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_BORPA (Glycogen synthase OS=Bordetella parapertussis GN=glgA PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 6.784e-32
Identity = 82/216 (37.96%), Postives = 128/216 (59.26%), Query Frame = 2
Query:   23 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIG-VKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE 655
            +N++KAGI  +  V TVS  YA+E+++    G  L  ++R  G  +  + NG+D   WNP  D ++G +++DA  + + K   K ALQAE+GL    +  V+    RL  QK +D+  AA+P  ++  E++Q  ++G G+  +E  L  L   YP +      ++ PLAH + AGAD +L  SRFEP GL  L+AMRYGT+P+ +  GG+VDT+ +
Sbjct:  205 VNFLKAGIRYATRVTTVSRAYAREILTPAF-GCGLHGLLRARGADLSPVPNGIDTALWNPAADPHLGGLRFDALDMRN-KACCKAALQAELGLQPRADATVLAMGSRLTGQKMADVAIAALPALLEAHEHLQFALIGRGEPALETALRALAARYPGRCAVHIGYDEPLAHRLHAGADLLLHGSRFEPFGLTPLYAMRYGTLPVASRVGGMVDTIRD 418          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA2_SYNJB (Glycogen synthase 2 OS=Synechococcus sp. GN=glgA2 PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 6.784e-32
Identity = 84/213 (39.44%), Postives = 127/213 (59.62%), Query Frame = 2
Query:   26 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLG-TGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVA 652
            N M AGIL +D V TVSP YA E+ +    G  L +++   G  ++GI+NG+D+  ++P TD  +   +     +  +   K  LQA++GL V+ +  ++G + RL EQKG D+L  A+  F+   + Q ++LG +G+   E ++ ++   +P K      +   LA +I  GAD  L+PSRFEPCG+ Q+ AMRYG VPIV  TGGLVDTV+
Sbjct:  190 NTMAAGILYADQVNTVSPTYAMEIRTPLH-GEGLQDLLAWKGERLRGILNGIDIDRFDPRTDPDLEANFSIDD-LSGRAANKATLQAKLGLTVNPDTFLMGMVARLVEQKGIDLLIQALDRFLDYSDAQFVLLGGSGEAYYEGRIREMAERHPGKMAYQKGYQPKLAQLIYGGADAFLMPSRFEPCGISQMIAMRYGCVPIVRRTGGLVDTVS 400          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_CHLAB (Glycogen synthase OS=Chlamydophila abortus GN=glgA PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 8.860e-32
Identity = 85/223 (38.12%), Postives = 124/223 (55.61%), Query Frame = 2
Query:   32 MKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII-RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL------KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTG-KKPMEKQLEQLE--ILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAEGFTGF 670
            +K  +  SD + TVSP YAQ++++        D I+ R+    GI+NG+D   WNP TD  + V+Y    +     L       K AL  ++GL ++ + P++  I R+ EQKG + + AAI H ++ +  +++ GT   +  ++Q   L+  +      R +  +N PL  +I   AD I IPS FEPCGL QL  MRYGTVP+V STGGL DTVA G  GF
Sbjct:  196 LKGALYCSDYITTVSPSYAQDILNDYSDYEIHDAIMSRRHVFCGILNGIDENIWNPETDPALAVRYGTHLLKSPDVLFTKKEENKIALYEKLGLSLEYS-PLMCVISRIVEQKGPEFMKAAILHAMENSYALVIAGTCYDQETQRQFTNLQESLTTSPNIRIILDYNDPLVRLIYGAADMICIPSHFEPCGLTQLIGMRYGTVPLVRSTGGLADTVAAGVNGF 417          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA1_SYNJA (Glycogen synthase 1 OS=Synechococcus sp. (strain JA-3-3Ab) GN=glgA1 PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 8.860e-32
Identity = 82/213 (38.50%), Postives = 126/213 (59.15%), Query Frame = 2
Query:   23 INWMKAGILESDMVLTVSPHYAQELVSGE-DKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGV---AKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 649
            +N+MK GI+ S+ V TVSP +A E   G  + G+     + +   +G++NG+D   WNP  D++I   Y A T ++ K   K+AL+ ++ L  D + P++ +IGRL+EQKG  ++  AI   + +N Q ++LG+  +P        E  Y      V     FN  L+H+I AGAD +++PS +EPCGL Q+  ++YGTVP+V   GGLVDTV
Sbjct:  205 LNFMKGGIVFSNFVTTVSPTHALEARFGNYNYGLGHTLYLHQHKFRGVLNGIDYDIWNPEIDRFIPFHYTAQT-LENKAKNKKALRDQLWLQ-DVDKPIVAYIGRLDEQKGVHLVHHAIYRSLFKNAQFVLLGSATEPGIGAWFAHEKRYLNDNPDVHIELGFNEELSHLIYAGADILVVPSHYEPCGLTQMIGLKYGTVPVVRGVGGLVDTV 415          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_RHILW (Glycogen synthase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=glgA PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.157e-31
Identity = 79/213 (37.09%), Postives = 121/213 (56.81%), Query Frame = 2
Query:   23 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRK--TGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE 655
            + ++K G+  +  + TVSP YA E+++ E  G+ L+ +I      + GIVNG+D   WNP TD  +   Y  +T+ + +   +    AE     + + P+   I RL  QKG DI+A      +    +++VLG+G+  +E  L      +P +      +N P++H++ AG D I+IPSRFEPCGL QL+ +RYG VPIVA TGGL DTV +
Sbjct:  197 VGYLKGGLQTAHAITTVSPTYADEILTPEF-GMGLEGVIASHIDNLHGIVNGIDTDIWNPATDPVVHTHYGPTTLKNREENRRSI--AEFFHLDNDDAPIFCVISRLTWQKGMDIVANIADEIVAMGGKLVVLGSGEAALEGALLASASRHPGRIGVSIGYNEPMSHLMQAGCDAIIIPSRFEPCGLTQLYGLRYGCVPIVARTGGLNDTVID 406          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_RHIEC (Glycogen synthase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=glgA PE=3 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 1.157e-31
Identity = 81/211 (38.39%), Postives = 121/211 (57.35%), Query Frame = 2
Query:   29 WMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE 655
            ++K G+  +  + TVSP YA E+++ E  G+ L+ +I  R   + GIVNG+D   WNP TD  +   Y  +T+ + +   +    AE     + + P+   I RL  QKG DI+A      +    +++VLG+G+  +E  L       P +      +N P++H++ AG D I+IPSRFEPCGL QL+A+RYG VPIVA TGGL DTV +
Sbjct:  199 FLKGGLQTAHAITTVSPTYADEILTPEF-GMGLEGVIATRIDDLHGIVNGIDTDVWNPATDPVVHTHYGPTTLKNREENRRSI--AEFFHLDNDDAPIFCVISRLTWQKGMDIVANVADRIVAMGGKLVVLGSGEAALEGALLASASRNPGRIGVSIGYNEPMSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCVPIVARTGGLNDTVID 406          
The following BLAST results are available for this feature:
BLAST of FC868653 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 364
Match NameE-valueIdentityDescription
GLGA_CHLL23.045e-3234.60Glycogen synthase OS=Chlorobium limicola (strain D... [more]
GLGA_PROA25.194e-3233.33Glycogen synthase OS=Prosthecochloris aestuarii (s... [more]
GLGA2_METCA5.194e-3237.78Glycogen synthase 2 OS=Methylococcus capsulatus GN... [more]
GLGA_PROMP6.784e-3238.28Glycogen synthase OS=Prochlorococcus marinus subsp... [more]
GLGA_BORPA6.784e-3237.96Glycogen synthase OS=Bordetella parapertussis GN=g... [more]
GLGA2_SYNJB6.784e-3239.44Glycogen synthase 2 OS=Synechococcus sp. GN=glgA2 ... [more]
GLGA_CHLAB8.860e-3238.12Glycogen synthase OS=Chlamydophila abortus GN=glgA... [more]
GLGA1_SYNJA8.860e-3238.50Glycogen synthase 1 OS=Synechococcus sp. (strain J... [more]
GLGA_RHILW1.157e-3137.09Glycogen synthase OS=Rhizobium leguminosarum bv. t... [more]
GLGA_RHIEC1.157e-3138.39Glycogen synthase OS=Rhizobium etli (strain CFN 42... [more]

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Properties
Property NameValue
Genbank descriptionC31003B03EF AbioticL1 Citrus clementina cDNA clone C31003B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868653 ID=FC868653; Name=FC868653; organism=Citrus clementina; type=EST; length=713bp
ATAAACCTGTGAGAGGATCAAAATCAACTGGATGAAAGCTGGAATATTAG
AATCAGACATGGTCTTAACTGTGAGCCCACACTATGCCCAAGAACTTGTT
TCTGGTGAAGACAAAGGAGTAGAATTGGATAACATCATCCGTAAAACTGG
CATTAAGGGAATTGTGAACGGGATGGATGTCCAGGAGTGGAACCCCTTGA
CTGACAAATATATAGGTGTCAAATATGATGCTTCAACTGTGATGGATGCG
AAGCCTCTTCTGAAGGAAGCCCTCCAAGCAGAAGTTGGGTTGCCTGTCGA
TAGAAATATTCCTGTCATAGGCTTCATTGGTAGACTTGAAGAGCAGAAAG
GCTCAGATATTCTTGCAGCTGCCATTCCCCATTTCATCAAAGAGAATGTT
CAGATAATAGTCCTTGGTACTGGCAAAAAACCAATGGAGAAGCAGCTTGA
ACAGTTGGAGATACTGTACCCTGAGAAAGCCAGAGGAGTAGCGAAATTCA
ATATTCCTCTGGCGCATATGATAATAGCAGGAGCTGATTTTATTTTGATT
CCAAGCAGATTTGAACCTTGTGGTCTCATTCAATTACATGCCATGCGTTA
TGGAACCGTACCTATCGTGGCTTCCACTGGTGGTTTGGTTGACACTGTGG
CAGAAGGCTTTACAGGATTCCAGATGGGAAGCTTCAGTGTTGACTGTGAG
GCTGTGGATCCAG
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