FC868653

Overview
NameFC868653
Unique NameFC868653
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length713
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_CHLPN (Glycogen synthase OS=Chlamydia pneumoniae GN=glgA PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.862e-30
Identity = 82/223 (36.77%), Postives = 118/223 (52.91%), Query Frame = 2
Query:   32 MKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGI-KGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL------KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKP-MEKQLEQLE--ILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAEGFTGF 670
            MK  +  SD + TVS  Y QE+++        D I+ +  +  GI+NG+D   WNP TD  + V+YDAS + +   L       +  L  ++G+  D   P+I  I R+ E+KG + +   I H ++ +   I++GT +   +  +   L+  +      R +  FN PLA +  A AD I IPS  E CGL QL AMRYGTVP+V  TGGL DTV  G  GF
Sbjct:  196 MKGALYCSDYITTVSLTYVQEIINDYSDYELHDAILARNSVFSGIINGIDEDVWNPKTDPALAVQYDASLLSEPDVLFTKKEENRAVLYEKLGISSDY-FPLICVISRIVEEKGPEFMKEIILHAMEHSYAFILIGTSQNEVLLNEFRNLQDCLASSPNIRLILDFNDPLARLTYAAADMICIPSHREACGLTQLIAMRYGTVPLVRKTGGLADTVIPGVNGF 417          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_BORPD (Glycogen synthase OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=glgA PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.862e-30
Identity = 78/216 (36.11%), Postives = 122/216 (56.48%), Query Frame = 2
Query:   20 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKEN--VQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE 655
            +IN+MKAG+  +D + TVS +YA+E+++ E  G  LD ++R     +  I NG+D   WNP +D ++G    ++     K   K ALQ   GL  D+   ++    RL  QK +D+   A+P  +  +  +Q+ ++G G++  E +LE L   YP +      ++   AH + AGAD +L  SRFEP GL  L+AMRYG VPI +  GG+ DT+ +
Sbjct:  200 RINFMKAGLRYADRITTVSRNYAREIMTPEF-GCGLDPLLRARAADLAPIPNGIDDALWNPASDPHLGHLCYSARNPARKSRAKAALQKAFGLHPDQGAALLAMGSRLTSQKMADVAVEALPDALHRHPSLQVAIIGRGERQYEIELEALAARYPGRCAVRIGYDETTAHRLHAGADMLLHGSRFEPFGLTPLYAMRYGAVPIASRVGGMADTIVD 414          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_CHLTA (Glycogen synthase OS=Chlamydia trachomatis (strain A/HAR-13 / ATCC VR-571B) GN=glgA PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 6.349e-30
Identity = 86/224 (38.39%), Postives = 122/224 (54.46%), Query Frame = 2
Query:   32 MKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDA------STVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGT--GKKPMEKQLEQLEILYPE-KARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAEGFTGF 670
            +K  +  SD V TVSP YA+E++  +    E+ + I  R+  ++GI+NG+D   W P TD  +   Y        S   +AK   K+AL   +GL ++ + P +  I R+ EQKG   +  AI H ++    +I++GT  G +  E+     E L      R +  ++  LA  I A AD I IPS FEPCGL Q+  MRYGTVP+V +TGGL DTVA G  GF
Sbjct:  197 LKGALYCSDFVTTVSPTYAKEILE-DYSDYEIHDAITARQHHLRGILNGIDTTIWGPETDPNLAKNYTKELFETPSIFFEAKAKNKKALYEILGLSLEHS-PCVCIISRIAEQKGPHFMKQAILHALENAYTLIIIGTCYGNQLHEEFANLQESLANSPNVRILLTYSDVLARQIFAAADMICIPSMFEPCGLTQMIGMRYGTVPLVRATGGLADTVANGINGF 418          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA1_BRAJA (Glycogen synthase 1 OS=Bradyrhizobium japonicum GN=glgA1 PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 6.349e-30
Identity = 77/221 (34.84%), Postives = 127/221 (57.47%), Query Frame = 2
Query:   20 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG----IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAEGFTGF 670
            +++++KAG++ +  + TVS  YA+E+ + E  G  L+ ++R       + GI+NG+D + W+P +   +  ++ A   +  K    + ++ + GL V R  P+ G + RL  QKG D++ +A    I    QI+V G+G+  +E+ L       P+       FN   A  I AG+DF L+PSRFEPCGL Q++A R+G++PI   TGGL +T+ +G TGF
Sbjct:  188 QVSFLKAGLVYASHLTTVSGTYAREITTAEF-GCGLEGLLRLRSDAAELTGILNGID-ESWDPRSCAQLAQQFGAGDWV-GKKANADYVRKQFGLAVSRG-PMFGIVARLVHQKGIDLVLSAADEIIDAGGQIVVTGSGEPALEQALIDAHRRRPDAIGVAIGFNDAQARRIFAGSDFTLMPSRFEPCGLSQMYAQRFGSLPIGHQTGGLAETITDGETGF 404          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA1_NITOC (Glycogen synthase 1 OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=glgA1 PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 8.293e-30
Identity = 85/224 (37.95%), Postives = 122/224 (54.46%), Query Frame = 2
Query:   23 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIK--GIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKP--------MEKQLEQ-----LEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 649
            +N MK GI+ S+ + TVSP Y  E +   D+G  L + + +   K  GI+NG+D + WNP  D YI  +Y+  T +D K   K AL+  + L  D   P++G I RL+ QKG +++  A+ + +    Q ++LG             +++ L       LEI Y E           LAH I AGAD +++PS +EPCGL Q+ AM+YGTVPIV   GGL DTV
Sbjct:  202 VNLMKGGIVFSNFITTVSPRYLDE-IRYTDQGYGLQHTLHEHSQKLGGILNGVDYKVWNPDIDPYIAARYNLKT-LDKKYENKTALRHRLWLR-DEYKPIVGVISRLDPQKGVELIRHALFYCLANGCQFVLLGASASNSINADFWYLKQYLNDDPDCHLEIGYDED----------LAHQIYAGADMLIVPSIYEPCGLTQMIAMKYGTVPIVRHVGGLADTV 412          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA1_ANAVT (Glycogen synthase 1 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=glgA1 PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 8.293e-30
Identity = 82/214 (38.32%), Postives = 121/214 (56.54%), Query Frame = 2
Query:   23 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGV---AKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 649
            +N+MK GI+ S+ V TVSP++A E     D G  L + +   K    GI+NG+D   WNP  D+YI   Y+     + K   K+AL+  + L    + P+I +IGRL+ QKG  ++  AI H + +  Q ++LG+  +       + E  +      V     FN  L+H+I AGAD I++PS +EPCGL Q+  ++YGTVPIV   GGLV+TV
Sbjct:  205 LNYMKGGIVYSNAVTTVSPNHALE-AQYTDVGCGLGHTLYQHKDKFSGILNGIDYDFWNPEIDRYIPYNYNQED-FEQKLYNKKALRERLLLQA-ADKPIIAYIGRLDNQKGVHLVHHAIYHSLNKGAQFVLLGSATEAGINAHFRHEKQFLNNNPDVHLELGFNEELSHLIYAGADMIVVPSNYEPCGLTQMIGLKYGTVPIVRGVGGLVNTV 415          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_FUSNN (Glycogen synthase OS=Fusobacterium nucleatum subsp. nucleatum GN=glgA PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.847e-29
Identity = 81/211 (38.39%), Postives = 117/211 (55.45%), Query Frame = 2
Query:   23 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIK--GIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 649
            I+++K G++ SD + TVS  YA+E+ + ++ G  +  + +K   K  GIVNG+D   + PL+ K                +LK  LQ ++GL V+ + P+I  I RL+ QKG D +       +   +Q I+LGTG+K  E      E L+  +      FN  L+  I AGAD  L+PS FEPCGL Q+ AMRYG +P+V  TGGL DTV
Sbjct:  195 ISFLKGGVVYSDYITTVSDSYAEEIKT-QELGEGIHGLFQKYDYKLSGIVNGIDKISY-PLSKK-------------PHKILKADLQKKLGLDVEEDTPLIVIITRLDRQKGLDYIVEKFDEMMSLGIQFILLGTGEKRYEHFFAYQEYLHKGQVCSYIGFNQELSTEIYAGADIFLMPSVFEPCGLSQMIAMRYGCIPVVRETGGLKDTV 390          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_PARDP (Glycogen synthase OS=Paracoccus denitrificans (strain Pd 1222) GN=glgA PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.413e-29
Identity = 80/212 (37.74%), Postives = 122/212 (57.55%), Query Frame = 2
Query:   20 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 649
            +I+ +KAGI+ +D V TVSP YA+EL++ E  G+ ++ ++  R     GI+NG+D+  W P                  K   + AL+ E GLP + + P+   + RL  QKG D+L  A+P  ++   Q+ VLG+G   +E    +    +   A  +  ++  L+  +IAG D IL+PSRFEPCGL QL+ +R+GT+P+VA TGGL DTV
Sbjct:  197 RISALKAGIVFADKVSTVSPTYAEELMTPEF-GMGMEGVLADRAGDFTGILNGIDLDAWKP-----------PYATPQGKAPHRAALRKEFGLP-ETDGPLCVVVSRLTGQKGLDLLIEALPALLENGGQLAVLGSGDPGLEAAFAKAAARHAGVALRLG-YDEALSRRMIAGGDAILVPSRFEPCGLTQLYGLRFGTLPLVALTGGLADTV 394          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_CHLFF (Glycogen synthase OS=Chlamydophila felis (strain Fe/C-56) GN=glgA PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.413e-29
Identity = 79/224 (35.27%), Postives = 122/224 (54.46%), Query Frame = 2
Query:   32 MKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII-RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL-------KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTG-KKPMEKQLEQLE--ILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAEGFTGF 670
            +K  +  SD + TVSP YAQ+++         D I+ R+   +GI+NG+D   WNP TD  +   Y    ++D+  +L       K AL  ++G+  + + P++  I R+ EQKG + + AAI H ++     I++G    +  +++   L+  +      R +  +N PLA ++   AD + IPS FEPCGL QL  MRYGTVP+  +TGGL DTV  G  GF
Sbjct:  196 LKGALYCSDYITTVSPTYAQDILHDYSDYEMHDAIMARRHVFRGILNGIDDNIWNPETDSSLVANY-GKNLLDSPEILFTKKEENKVALYEKLGMSPEHS-PLLCIISRIVEQKGPEFMKAAILHAMENGYAFILVGKCYDEETQRKFSNLQESLTMSPNVRIILDYNEPLARLLYGAADMLCIPSHFEPCGLTQLIGMRYGTVPLARATGGLADTVTPGINGF 417          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_PSEPF (Glycogen synthase OS=Pseudomonas fluorescens (strain Pf0-1) GN=glgA PE=3 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 3.151e-29
Identity = 78/229 (34.06%), Postives = 127/229 (55.46%), Query Frame = 2
Query:   20 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIR-KTG---IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAEGFTGFQMGSFSVD 694
            K++++KAG+  S  + TVS  YAQE+ +  D G  LD  +  KT    + GI NG+D + W+  TD ++   + A    + K +    ++   GL  D   P+   + RL  QKG D+  A   + ++   QI ++G G+   E+ + +L + +P +      FN   A  + AG+DF+L+PSR+EPCGL Q++A R+G++P+  +TGGL DT+  G TGF     + D
Sbjct:  205 KMSFLKAGMAYSSHITTVSATYAQEITT-PDFGCGLDGFLAAKTQQGLLSGIPNGID-ESWDAATDPHLFAPF-AIGDWEGKAINAAHVRELFGLK-DSEGPLFAVVSRLVYQKGLDLTEAVSEYIVQNGGQIAIIGRGEPEEEQAMRELALRFPGQIGVRIGFNETDARRMFAGSDFLLMPSRYEPCGLSQMYAQRFGSLPVARNTGGLADTIENGVTGFLFNESTAD 429          
The following BLAST results are available for this feature:
BLAST of FC868653 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 364
Match NameE-valueIdentityDescription
GLGA_CHLPN4.862e-3036.77Glycogen synthase OS=Chlamydia pneumoniae GN=glgA ... [more]
GLGA_BORPD4.862e-3036.11Glycogen synthase OS=Bordetella petrii (strain ATC... [more]
GLGA_CHLTA6.349e-3038.39Glycogen synthase OS=Chlamydia trachomatis (strain... [more]
GLGA1_BRAJA6.349e-3034.84Glycogen synthase 1 OS=Bradyrhizobium japonicum GN... [more]
GLGA1_NITOC8.293e-3037.95Glycogen synthase 1 OS=Nitrosococcus oceani (strai... [more]
GLGA1_ANAVT8.293e-3038.32Glycogen synthase 1 OS=Anabaena variabilis (strain... [more]
GLGA_FUSNN1.847e-2938.39Glycogen synthase OS=Fusobacterium nucleatum subsp... [more]
GLGA_PARDP2.413e-2937.74Glycogen synthase OS=Paracoccus denitrificans (str... [more]
GLGA_CHLFF2.413e-2935.27Glycogen synthase OS=Chlamydophila felis (strain F... [more]
GLGA_PSEPF3.151e-2934.06Glycogen synthase OS=Pseudomonas fluorescens (stra... [more]

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Properties
Property NameValue
Genbank descriptionC31003B03EF AbioticL1 Citrus clementina cDNA clone C31003B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868653 ID=FC868653; Name=FC868653; organism=Citrus clementina; type=EST; length=713bp
ATAAACCTGTGAGAGGATCAAAATCAACTGGATGAAAGCTGGAATATTAG
AATCAGACATGGTCTTAACTGTGAGCCCACACTATGCCCAAGAACTTGTT
TCTGGTGAAGACAAAGGAGTAGAATTGGATAACATCATCCGTAAAACTGG
CATTAAGGGAATTGTGAACGGGATGGATGTCCAGGAGTGGAACCCCTTGA
CTGACAAATATATAGGTGTCAAATATGATGCTTCAACTGTGATGGATGCG
AAGCCTCTTCTGAAGGAAGCCCTCCAAGCAGAAGTTGGGTTGCCTGTCGA
TAGAAATATTCCTGTCATAGGCTTCATTGGTAGACTTGAAGAGCAGAAAG
GCTCAGATATTCTTGCAGCTGCCATTCCCCATTTCATCAAAGAGAATGTT
CAGATAATAGTCCTTGGTACTGGCAAAAAACCAATGGAGAAGCAGCTTGA
ACAGTTGGAGATACTGTACCCTGAGAAAGCCAGAGGAGTAGCGAAATTCA
ATATTCCTCTGGCGCATATGATAATAGCAGGAGCTGATTTTATTTTGATT
CCAAGCAGATTTGAACCTTGTGGTCTCATTCAATTACATGCCATGCGTTA
TGGAACCGTACCTATCGTGGCTTCCACTGGTGGTTTGGTTGACACTGTGG
CAGAAGGCTTTACAGGATTCCAGATGGGAAGCTTCAGTGTTGACTGTGAG
GCTGTGGATCCAG
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