FC868656

Overview
NameFC868656
Unique NameFC868656
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length710
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: BIP3_MAIZE (Luminal-binding protein 3 OS=Zea mays GN=BIPE3 PE=2 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 2.389e-77
Identity = 153/237 (64.56%), Postives = 182/237 (76.79%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYK-GEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYXGIDFLLTIT 710
            T+FD K LIGR+F D  VQ DMKL P+K+I     KP I V  K GE K F+ EEIS+M+L KM++ AEAYLG  I +AVVTVPAYFND+QRQATKDAGVIAGLNV RIINEPTAAAIAYGLDKK    GEKN+L+FDLGGGTFDVS+LTI+ G+FEV AT GDTHLGGEDFD R++ +F++  K+K  KDIS + RAL +LR   ERAKR LS+  Q  +EI+SL+ G DF   +T
Sbjct:   95 TIFDVKRLIGRKFQDKEVQRDMKLVPYKII-NKDGKPYIQVKIKDGENKVFSPEEISAMILGKMKDTAEAYLGKKINDAVVTVPAYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKKG---GEKNILVFDLGGGTFDVSILTIDNGVFEVLATNGDTHLGGEDFDQRIMEYFIKLIKKKYSKDISKDNRALGKLRREAERAKRALSNQHQVRVEIESLFDGTDFSEPLT 327          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: GRP78_APLCA (78 kDa glucose-regulated protein OS=Aplysia californica PE=1 SV=1)

HSP 1 Score: 286.574 bits (732), Expect = 9.080e-77
Identity = 150/236 (63.56%), Postives = 180/236 (76.27%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYXGIDFLLTIT 710
            T+FD K LIGR F D SVQ D+K +PFKV     +KP I       ++ FA EEIS+MVL KMR+IAE YLG  I NAVVTVPAYFND+QRQATKDAG IAGLNVMRIINEPTAAAIAYGLDKK    GEKN+L+FDLGGGTFDVSLLTI+ G+FEV +T GDTHLGGEDFD R++ HF++ +K+K  KDI  + RA+++LR   E+AKR LSS  Q  +EI+S + G DF  ++T
Sbjct:  101 TIFDVKRLIGRTFDDKSVQHDIKFYPFKV-TNANNKPHIQAATGEGDRSFAPEEISAMVLSKMRDIAEEYLGKKITNAVVTVPAYFNDAQRQATKDAGTIAGLNVMRIINEPTAAAIAYGLDKKE---GEKNILVFDLGGGTFDVSLLTIDNGVFEVVSTNGDTHLGGEDFDQRVMEHFIKLYKKKKGKDIRKDNRAVQKLRREVEKAKRALSSAHQVRLEIESFFDGEDFSESLT 332          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: HSP70_PENCI (Heat shock 70 kDa protein (Fragment) OS=Penicillium citrinum GN=HSP70 PE=1 SV=1)

HSP 1 Score: 282.722 bits (722), Expect = 1.311e-75
Identity = 142/168 (84.52%), Postives = 155/168 (92.26%), Query Frame = 3
Query:  207 AYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYXGIDFLLTIT 710
            AYLG T+ NAV+TVPAYFNDSQRQATKDAG+IAGLNV+RIINEPTAAAIAYGLDKK    GE+NVLIFDLGGGTFDVSLLTIEEGIFEVK+TAGDTHLGGEDFDNR+VNHFV EFKRK+KKD++ N RALRRLRTACERAKRTLSS AQT+IEIDSL+ GIDF  +IT
Sbjct:    1 AYLGGTVNNAVITVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGLDKKTE--GERNVLIFDLGGGTFDVSLLTIEEGIFEVKSTAGDTHLGGEDFDNRLVNHFVNEFKRKHKKDLTTNARALRRLRTACERAKRTLSSAAQTSIEIDSLFEGIDFYTSIT 166          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: BIP2_DICDI (Luminal-binding protein 2 OS=Dictyostelium discoideum GN=bip2 PE=1 SV=1)

HSP 1 Score: 281.952 bits (720), Expect = 2.236e-75
Identity = 140/236 (59.32%), Postives = 186/236 (78.81%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYXGIDFLLTIT 710
            T+FD K LIGRRF D  VQ DMKL P+K+++   +KP + V  KGEEK ++ EEIS+M+L +M+EIAEA LG T+ +AVVT PAYFND+QR ATKDAGVIAGL V+R+INEPTAAA+AYG D  AT   EKN+L++DLGGGTFDVS+L+IE+G+FEV++T GDTHLGGEDFD R++ HF+  F++K  KD S + ++L++LR A E AKR LS++ QT +EI++ + G D + T+T
Sbjct:   94 TIFDIKRLIGRRFDDEEVQRDMKLLPYKIVS-KNNKPYVVVKVKGEEKTYSPEEISAMILGRMKEIAEASLGKTVTHAVVTCPAYFNDAQRAATKDAGVIAGLEVLRVINEPTAAALAYGFD--ATGDKEKNILVYDLGGGTFDVSVLSIEDGVFEVRSTNGDTHLGGEDFDQRVMKHFLTVFQKKTGKDASKDKKSLQKLRRAAENAKRILSTSPQTQLEIENFFDGKDLIETLT 326          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: GRP78_KLULA (78 kDa glucose-regulated protein homolog OS=Kluyveromyces lactis GN=GRP78 PE=3 SV=1)

HSP 1 Score: 280.026 bits (715), Expect = 8.498e-75
Identity = 138/236 (58.47%), Postives = 183/236 (77.54%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYXGIDFLLTIT 710
            T+FD K LIG +++D +VQ D+K  P+ V+    +KP + V  KGE+K+F  EE+S M+L KM++IAE YLG  + +AVVTVPAYFND+QRQATKDAG IAGLN++RI+NEPTAAAIAYGLDK   +  E  ++++DLGGGTFDVSLL+IE G+FEV+ATAGDTHLGGEDFD ++V HF Q F++K+  D++ N +A+ +L+   E+AKR+LSS   T IEIDS + GIDF  T+T
Sbjct:  113 TIFDIKRLIGLQYNDPTVQRDIKHLPYTVV-NKGNKPYVEVTVKGEKKEFTPEEVSGMILGKMKQIAEDYLGKKVTHAVVTVPAYFNDAQRQATKDAGAIAGLNILRIVNEPTAAAIAYGLDK---TEDEHQIIVYDLGGGTFDVSLLSIENGVFEVQATAGDTHLGGEDFDYKLVRHFAQLFQKKHDLDVTKNDKAMAKLKREAEKAKRSLSSQTSTRIEIDSFFNGIDFSETLT 344          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: GRP78_CANGA (78 kDa glucose-regulated protein homolog OS=Candida glabrata GN=KAR2 PE=3 SV=1)

HSP 1 Score: 275.789 bits (704), Expect = 1.603e-73
Identity = 142/236 (60.17%), Postives = 179/236 (75.85%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYXGIDFLLTIT 710
            T+FD K LIG +F+D SVQ D+K  PFKV+     KP++ V  KGE++ F  EEIS M+L KM++IAE YLG  + +AVVTVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAAIAYGLDK   S  E  ++++DLGGGTFDVSLL+IE G+FEV+AT+GDTHLGGEDFD ++V   ++ FK+K+  D+S N +AL +L+   E+AKR LSS   T IEIDS   GID   T+T
Sbjct:   98 TIFDIKRLIGLKFNDRSVQRDIKHLPFKVVDKDG-KPVVQVKVKGEDRVFTPEEISGMILGKMKQIAEDYLGKKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVLRIVNEPTAAAIAYGLDK---SDKEHQIIVYDLGGGTFDVSLLSIENGVFEVQATSGDTHLGGEDFDYKIVRQLIKTFKKKHGIDVSDNEKALAKLKREAEKAKRALSSQMSTRIEIDSFVDGIDLSETLT 329          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: GRP78_ASHGO (78 kDa glucose-regulated protein homolog OS=Ashbya gossypii GN=KAR2 PE=3 SV=1)

HSP 1 Score: 275.789 bits (704), Expect = 1.603e-73
Identity = 141/239 (59.00%), Postives = 181/239 (75.73%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADK---PMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYXGIDFLLTIT 710
            T+FD K LIG +++D +VQ ++K  PF+V+    DK   P + V  KGE K F  EEIS MVL KM++IAE YLG  + +AVVTVPAYFND+QRQATKDAG IAGLN++RI+NEPTAAAIAYGLDK   +  E  ++++DLGGGTFDVSLL+IE G+FEV+ATAGDTHLGGEDFD ++V HF++ FK+K+  D+S N +A+ +L+   E+AKR LSS   T +EIDS   GIDF  T+T
Sbjct:  109 TIFDIKRLIGLKYNDKTVQREIKHLPFEVV----DKNGMPAVAVTVKGERKLFTPEEISGMVLGKMKQIAEEYLGKKVTHAVVTVPAYFNDAQRQATKDAGAIAGLNILRIVNEPTAAAIAYGLDK---TEDEHRIVVYDLGGGTFDVSLLSIENGVFEVQATAGDTHLGGEDFDYKLVRHFLKVFKKKHGVDVSSNAKAMAKLKREAEKAKRALSSQMSTRVEIDSFVDGIDFSETLT 340          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: GRP78_YARLI (78 kDa glucose-regulated protein homolog OS=Yarrowia lipolytica GN=KAR2 PE=3 SV=1)

HSP 1 Score: 275.404 bits (703), Expect = 2.093e-73
Identity = 138/236 (58.47%), Postives = 182/236 (77.12%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYXGIDFLLTIT 710
            T+FD K LIG ++ D SVQ D+K +P+KV      KP++ V  KGE+K +  EEIS+M+L KM++IA+ YLG  + +AVVTVPAYFND+QRQATKDAG+IAGLNV+RI+NEPTAAAIAYGLD    +  EK ++++DLGGGTFDVSLL+IE G+FEV ATAGDTHLGGEDFD R++ HFV+++ +K+  DI+ N + + +L+   E+AKRTLSS   T IEI+S + G DF  T+T
Sbjct:   99 TIFDIKRLIGLKYKDESVQRDIKHFPYKV-KNKDGKPVVVVETKGEKKTYTPEEISAMILTKMKDIAQDYLGKKVTHAVVTVPAYFNDAQRQATKDAGIIAGLNVLRIVNEPTAAAIAYGLDH---TDDEKQIVVYDLGGGTFDVSLLSIESGVFEVLATAGDTHLGGEDFDYRVIKHFVKQYNKKHDVDITKNAKTIGKLKREVEKAKRTLSSQMSTRIEIESFFDGEDFSETLT 330          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: GRP78_YEAST (78 kDa glucose-regulated protein homolog OS=Saccharomyces cerevisiae GN=KAR2 PE=1 SV=1)

HSP 1 Score: 273.478 bits (698), Expect = 7.954e-73
Identity = 141/236 (59.75%), Postives = 179/236 (75.85%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYXGIDFLLTIT 710
            T+FD K LIG +++D SVQ D+K  PF V+     KP + V+ KGE+K F  EEIS M+L KM++IAE YLG+ + +AVVTVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAAIAYGLDK   S  E  ++++DLGGGTFDVSLL+IE G+FEV+AT+GDTHLGGEDFD ++V   ++ FK+K+  D+S N +AL +L+   E+AKR LSS   T IEIDS   GID   T+T
Sbjct:  112 TIFDIKRLIGLKYNDRSVQKDIKHLPFNVV-NKDGKPAVEVSVKGEKKVFTPEEISGMILGKMKQIAEDYLGTKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVLRIVNEPTAAAIAYGLDK---SDKEHQIIVYDLGGGTFDVSLLSIENGVFEVQATSGDTHLGGEDFDYKIVRQLIKAFKKKHGIDVSDNNKALAKLKREAEKAKRALSSQMSTRIEIDSFVDGIDLSETLT 343          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: GRP78_SCHPO (78 kDa glucose-regulated protein homolog OS=Schizosaccharomyces pombe GN=bip1 PE=2 SV=2)

HSP 1 Score: 273.092 bits (697), Expect = 1.039e-72
Identity = 133/236 (56.36%), Postives = 184/236 (77.97%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYXGIDFLLTIT 710
            T+FD K LIGR+F + ++  D+K +PF ++    ++P++ VN  G++K+F  EEIS+M+L KM++ AEAYLG  + +AVVTVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAAIAYGLDK  T   EK+++++DLGGGTFDVSLL+I+ G+FEV AT+GDTHLGGEDFDNR++N+  + + RKN  D++ + +A+ +L+   E+AKRTLSS     IEI+S + G DF  T++
Sbjct:   97 TIFDIKRLIGRKFDEKTMAKDIKSFPFHIV-NDKNRPLVEVNVGGKKKKFTPEEISAMILSKMKQTAEAYLGKPVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVIRIVNEPTAAAIAYGLDKTDT---EKHIVVYDLGGGTFDVSLLSIDNGVFEVLATSGDTHLGGEDFDNRVINYLARTYNRKNNVDVTKDLKAMGKLKREVEKAKRTLSSQKSVRIEIESFFNGQDFSETLS 328          
The following BLAST results are available for this feature:
BLAST of FC868656 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
BIP3_MAIZE2.389e-7764.56Luminal-binding protein 3 OS=Zea mays GN=BIPE3 PE=... [more]
GRP78_APLCA9.080e-7763.5678 kDa glucose-regulated protein OS=Aplysia califo... [more]
HSP70_PENCI1.311e-7584.52Heat shock 70 kDa protein (Fragment) OS=Penicilliu... [more]
BIP2_DICDI2.236e-7559.32Luminal-binding protein 2 OS=Dictyostelium discoid... [more]
GRP78_KLULA8.498e-7558.4778 kDa glucose-regulated protein homolog OS=Kluyve... [more]
GRP78_CANGA1.603e-7360.1778 kDa glucose-regulated protein homolog OS=Candid... [more]
GRP78_ASHGO1.603e-7359.0078 kDa glucose-regulated protein homolog OS=Ashbya... [more]
GRP78_YARLI2.093e-7358.4778 kDa glucose-regulated protein homolog OS=Yarrow... [more]
GRP78_YEAST7.954e-7359.7578 kDa glucose-regulated protein homolog OS=Saccha... [more]
GRP78_SCHPO1.039e-7256.3678 kDa glucose-regulated protein homolog OS=Schizo... [more]

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Properties
Property NameValue
Genbank descriptionC31003B06EF AbioticL1 Citrus clementina cDNA clone C31003B06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868656 ID=FC868656; Name=FC868656; organism=Citrus clementina; type=EST; length=710bp
ACACCGTCTTTGATGCAAAGAGCTTGATTGGTAGGAGATTCAGCGATGCA
TCAGTCCAAGGAGATATGAAGCTATGGCCATTTAAGGTGATTGCTGGACC
AGCTGACAAGCCCATGATTGGTGTTAACTACAAGGGCGAAGAGAAGCAGT
TTGCTGCTGAGGAAATCTCGTCTATGGTGCTCATCAAGATGCGTGAGATT
GCCGAGGCTTACCTTGGCTCAACTATTAAGAATGCAGTCGTTACTGTCCC
TGCTTACTTCAATGACTCACAGAGGCAGGCCACCAAGGATGCTGGTGTCA
TTGCTGGGCTTAATGTGATGCGTATCATCAATGAGCCCACTGCTGCTGCC
ATTGCTTATGGCCTTGACAAGAAGGCTACTAGTGTGGGTGAGAAGAATGT
GTTGATCTTTGATTTGGGTGGTGGTACTTTTGATGTGTCGTTGCTCACTA
TTGAGGAGGGAATCTTTGAAGTGAAGGCTACTGCTGGAGACACTCATCTT
GGTGGTGAGGATTTTGATAACAGAATGGTGAATCATTTTGTTCAGGAGTT
TAAGAGGAAGAACAAGAAGGATATTAGTGGCAACCCTAGAGCTCTTAGGA
GATTGAGGACTGCTTGTGAGAGAGCGAAGAGGACTCTCTCCTCTACTGCC
CAGACTACAATTGAGATTGATTCTTTGTATGANGGTATTGACTTTCTACT
CACCATAACT
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