FC868656

Overview
NameFC868656
Unique NameFC868656
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length710
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: GRP78_DEBHA (78 kDa glucose-regulated protein homolog OS=Debaryomyces hansenii GN=KAR2 PE=3 SV=1)

HSP 1 Score: 273.092 bits (697), Expect = 1.039e-72
Identity = 141/236 (59.75%), Postives = 178/236 (75.42%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYXGIDFLLTIT 710
            TVFD K LIG +++D  VQ ++K  P+K+      KP++ V +  E K F+ EEIS M+L KM+ IAE Y+G  I +AVVTVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAAIAYGLDK   + GEK ++++DLGGGTFDVSLL+IE G+FEV ATAGDTHLGGEDFD ++V +    FK+K+  DISGN +A+ +L+   E+AKRTLSS   T IEIDS   GIDF  T++
Sbjct:  111 TVFDIKRLIGLKYNDKMVQKEIKHLPYKIDKKDG-KPVVKVEFNDETKTFSPEEISGMILTKMKSIAEEYMGKKITHAVVTVPAYFNDAQRQATKDAGTIAGLNVLRIVNEPTAAAIAYGLDK---TEGEKQIIVYDLGGGTFDVSLLSIEGGVFEVLATAGDTHLGGEDFDFKVVRYLSSVFKKKHNIDISGNSKAISKLKRETEKAKRTLSSQMSTRIEIDSFVDGIDFSETLS 342          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: GRP78_PICAN (78 kDa glucose-regulated protein homolog OS=Pichia angusta GN=BiP PE=3 SV=1)

HSP 1 Score: 271.552 bits (693), Expect = 3.023e-72
Identity = 142/231 (61.47%), Postives = 173/231 (74.89%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYXGIDF 695
            T+FD K LIG RF D  +Q ++K  P+KV      +P++     GE K F AEEIS+M+L KM++IAE YLG  + +AVVTVPAYFND+QRQATKDAG IAGL V+RI+NEPTAAAIAYGLDK      EK+++++DLGGGTFDVSLLTI  G FEV ATAGDTHLGGEDFD R+V HF++ FK+K+  DIS N +AL +L+   E+AKRTLSS   T IEIDS   GIDF
Sbjct:  102 TIFDIKRLIGHRFDDKVIQKEIKHLPYKV-KDQDGRPVVEAKVNGELKTFTAEEISAMILGKMKQIAEDYLGKKVTHAVVTVPAYFNDAQRQATKDAGTIAGLEVLRIVNEPTAAAIAYGLDKTDE---EKHIIVYDLGGGTFDVSLLTIAGGAFEVLATAGDTHLGGEDFDYRVVRHFIKVFKKKHGIDISDNSKALAKLKREVEKAKRTLSSQMSTRIEIDSFVDGIDF 328          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: GRP78_ASPNG (78 kDa glucose-regulated protein homolog OS=Aspergillus niger GN=bipA PE=2 SV=1)

HSP 1 Score: 268.47 bits (685), Expect = 2.559e-71
Identity = 136/236 (57.63%), Postives = 177/236 (75.00%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYXGIDFLLTIT 710
            T+FD K LIGR+F D  VQ D K +P+KV+     KP + V+     K    EE+S+MVL KM+EIAE YLG  + +AVVTVPAYFND+QRQATKDAG IAGLNV+R++NEPTAAAIAYGLDK      E+ V+++DLGGGTFDVSLL+I+ G+FEV ATAGDTHLGGEDFD R+++HFV+ + +KN  D++ + +A+ +L+   E+AKRTLSS   T IEI++ + G DF  T+T
Sbjct:  111 TIFDIKRLIGRKFDDKDVQKDAKHFPYKVV-NKDGKPHVKVDVNQTPKTLTPEEVSAMVLGKMKEIAEGYLGKKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVLRVVNEPTAAAIAYGLDKTGD---ERQVIVYDLGGGTFDVSLLSIDNGVFEVLATAGDTHLGGEDFDQRVMDHFVKLYNKKNNVDVTKDLKAMGKLKREVEKAKRTLSSQMSTRIEIEAFHNGEDFSETLT 342          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: GRP78_ASPKA (78 kDa glucose-regulated protein homolog OS=Aspergillus kawachi GN=bipA PE=3 SV=1)

HSP 1 Score: 268.47 bits (685), Expect = 2.559e-71
Identity = 136/236 (57.63%), Postives = 177/236 (75.00%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYXGIDFLLTIT 710
            T+FD K LIGR+F D  VQ D K +P+KV+     KP + V+     K    EE+S+MVL KM+EIAE YLG  + +AVVTVPAYFND+QRQATKDAG IAGLNV+R++NEPTAAAIAYGLDK      E+ V+++DLGGGTFDVSLL+I+ G+FEV ATAGDTHLGGEDFD R+++HFV+ + +KN  D++ + +A+ +L+   E+AKRTLSS   T IEI++ + G DF  T+T
Sbjct:  111 TIFDIKRLIGRKFDDKDVQKDAKHFPYKVV-NKDGKPHVKVDVNQTPKTLTPEEVSAMVLGKMKEIAEGYLGKKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVLRVVNEPTAAAIAYGLDKTGD---ERQVIVYDLGGGTFDVSLLSIDNGVFEVLATAGDTHLGGEDFDQRVMDHFVKLYNKKNNVDVTKDLKAMGKLKREVEKAKRTLSSQMSTRIEIEAFHNGEDFSETLT 342          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: GRP78_ASPAW (78 kDa glucose-regulated protein homolog OS=Aspergillus awamori GN=bipA PE=2 SV=1)

HSP 1 Score: 268.47 bits (685), Expect = 2.559e-71
Identity = 136/236 (57.63%), Postives = 177/236 (75.00%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYXGIDFLLTIT 710
            T+FD K LIGR+F D  VQ D K +P+KV+     KP + V+     K    EE+S+MVL KM+EIAE YLG  + +AVVTVPAYFND+QRQATKDAG IAGLNV+R++NEPTAAAIAYGLDK      E+ V+++DLGGGTFDVSLL+I+ G+FEV ATAGDTHLGGEDFD R+++HFV+ + +KN  D++ + +A+ +L+   E+AKRTLSS   T IEI++ + G DF  T+T
Sbjct:  111 TIFDIKRLIGRKFDDKDVQKDAKHFPYKVV-NKDGKPHVKVDVNQTPKTLTPEEVSAMVLGKMKEIAEGYLGKKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVLRVVNEPTAAAIAYGLDKTGD---ERQVIVYDLGGGTFDVSLLSIDNGVFEVLATAGDTHLGGEDFDQRVMDHFVKLYNKKNNVDVTKDLKAMGKLKREVEKAKRTLSSQMSTRIEIEAFHNGEDFSETLT 342          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: GRP78_PLAFO (78 kDa glucose-regulated protein homolog OS=Plasmodium falciparum (isolate NF54) PE=3 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 1.314e-67
Identity = 133/237 (56.12%), Postives = 176/237 (74.26%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRII-NEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYXGIDFLLTIT 710
            TVFD K LIGR+F D  V  D  L P++++     KP I V  K ++  FA E+IS+MVL KM+EIA+++LG  +KNAVVTVPAYFND+QRQATKDAG IAGLN++RII N+PTAAA+AY LDKK     E ++L++DLGGGTFDVS+L I+ G+FEV ATAG+THLGGEDFD R++++F++ FK+KN  D+  + RA+++LR   E AKR LS    T IEI+ +  G +F  T+T
Sbjct:   90 TVFDVKRLIGRKFDDQEVVKDRSLLPYEIVNNQG-KPNIKVQIKDKDTTFAPEQISAMVLEKMKEIAQSFLGKPVKNAVVTVPAYFNDAQRQATKDAGTIAGLNIVRIIINQPTAAALAYALDKKE----ETSILVYDLGGGTFDVSILVIDNGVFEVYATAGNTHLGGEDFDQRVMDYFIKMFKKKNNIDLRTDKRAIQKLRKEVEIAKRNLSVVHSTQIEIEDIVEGHNFSETLT 321          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: HSP7F_CAEEL (Heat shock 70 kDa protein F, mitochondrial OS=Caenorhabditis elegans GN=hsp-6 PE=1 SV=2)

HSP 1 Score: 248.44 bits (633), Expect = 2.740e-65
Identity = 123/222 (55.41%), Postives = 169/222 (76.13%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGRR+ D  VQ D+K+ P+K++        +    + + K ++  ++ + VL+KM+E AE+YLG+T+ NAVVTVPAYFNDSQRQATKDAG I+GLNV+R+INEPTAAA+AYGLDK A   G+K + ++DLGGGTFDVS+L I++G+FEVK+T GDT LGGEDFD+ +V+H V EFK++   D++ +P+A++RLR A E+AK  LSST QT I +
Sbjct:   94 TLFATKRLIGRRYEDPEVQKDLKVVPYKIVKASNGDAWV----EAQGKVYSPSQVGAFVLMKMKETAESYLGTTVNNAVVTVPAYFNDSQRQATKDAGQISGLNVLRVINEPTAAALAYGLDKDA---GDKIIAVYDLGGGTFDVSILEIQKGVFEVKSTNGDTFLGGEDFDHALVHHLVGEFKKEQGVDLTKDPQAMQRLREAAEKAKCELSSTTQTDINL 308          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_SYNAS (Chaperone protein dnaK OS=Syntrophus aciditrophicus (strain SB) GN=dnaK PE=2 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 2.836e-62
Identity = 123/222 (55.41%), Postives = 160/222 (72.07%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            TV+  K LIGR+++   VQ D  + PFK+   P     I V  +     ++  EISSMVL+KM++ AE YLG  I +AV+TVPAYFNDSQRQATKDAG IAGLNV+RIINEPTAAA+AYGLDKK     ++ + +FDLGGGTFD+S+L + EG+FEVK+T GDTHLGGEDFD R++++ V EFK+    DI  +  AL+RL+ A E+AK  LSS+ +T I +
Sbjct:   65 TVYAVKRLIGRKYNSKEVQYDKSISPFKISEAPNGDAQIEVRGRA----YSPAEISSMVLVKMKQTAEDYLGEKITDAVITVPAYFNDSQRQATKDAGKIAGLNVLRIINEPTAAALAYGLDKKK----DEKIAVFDLGGGTFDISILELGEGVFEVKSTNGDTHLGGEDFDQRIIDYLVSEFKKDQGIDIRSDKMALQRLKEAAEKAKMELSSSMETDINL 278          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: HSP7C_TRYBB (Heat shock cognate HSP70 protein OS=Trypanosoma brucei brucei PE=3 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 6.317e-62
Identity = 128/237 (54.01%), Postives = 164/237 (69.20%), Query Frame = 3
Query:    6 VFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFK-RKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLY-XGIDFLLTIT 710
            +FDAK LIGR+FSD+ VQ DMK WPFKV  G     ++ V + GE      E+IS+ VL  ++  AE+YLG  +  AVVTVPAYFNDSQRQATKDAG IAGL V+RIINEPTAAAIAYGLD KA    E+NVL+FD GGGTFDVS++++  G+FEVKAT GDTHLGGED D  ++ H + + + R   +  S + + L +LR+ CE  KR LS +    I +D L   G +++L +T
Sbjct:   67 IFDAKRLIGRKFSDSVVQSDMKHWPFKVEEGEKGGAVMRVEHLGEGMLLQPEQISARVLAYLKSCAESYLGKQVAKAVVTVPAYFNDSQRQATKDAGTIAGLEVLRIINEPTAAAIAYGLD-KADEGKERNVLVFDFGGGTFDVSIISVSGGVFEVKATNGDTHLGGEDVDAALLEHALADIRNRYGIEQGSLSQKMLSKLRSRCEEVKRVLSHSTVGEIALDGLLPDGEEYVLKLT 302          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: HSP7M_PHAVU (Heat shock 70 kDa protein, mitochondrial OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 8.250e-62
Identity = 124/222 (55.86%), Postives = 157/222 (70.72%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            TVF  K LIGRRF D   Q +MK+ PFK++  P     +  N     +Q++  +I + VL KM+E AEAYLG ++  AV+TVPAYFND+QRQATKDAG IAGL+V RIINEPTAAA++YG++ K     E  + +FDLGGGTFDVS+L I  G+FEVKAT GDT LGGEDFDN +++  V EFKR    D+S +  AL+RLR A E+AK  LSST+QT I +
Sbjct:  114 TVFGTKRLIGRRFDDPQTQKEMKMVPFKIVKAPNGDAWVEAN----GQQYSPSQIGAFVLTKMKETAEAYLGKSVSKAVITVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAALSYGMNNK-----EGLIAVFDLGGGTFDVSILEISNGVFEVKATNGDTFLGGEDFDNALLDFLVNEFKRTESIDLSKDRLALQRLREAAEKAKIELSSTSQTEINL 326          
The following BLAST results are available for this feature:
BLAST of FC868656 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GRP78_DEBHA1.039e-7259.7578 kDa glucose-regulated protein homolog OS=Debary... [more]
GRP78_PICAN3.023e-7261.4778 kDa glucose-regulated protein homolog OS=Pichia... [more]
GRP78_ASPNG2.559e-7157.6378 kDa glucose-regulated protein homolog OS=Asperg... [more]
GRP78_ASPKA2.559e-7157.6378 kDa glucose-regulated protein homolog OS=Asperg... [more]
GRP78_ASPAW2.559e-7157.6378 kDa glucose-regulated protein homolog OS=Asperg... [more]
GRP78_PLAFO1.314e-6756.1278 kDa glucose-regulated protein homolog OS=Plasmo... [more]
HSP7F_CAEEL2.740e-6555.41Heat shock 70 kDa protein F, mitochondrial OS=Caen... [more]
DNAK_SYNAS2.836e-6255.41Chaperone protein dnaK OS=Syntrophus aciditrophicu... [more]
HSP7C_TRYBB6.317e-6254.01Heat shock cognate HSP70 protein OS=Trypanosoma br... [more]
HSP7M_PHAVU8.250e-6255.86Heat shock 70 kDa protein, mitochondrial OS=Phaseo... [more]

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Properties
Property NameValue
Genbank descriptionC31003B06EF AbioticL1 Citrus clementina cDNA clone C31003B06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868656 ID=FC868656; Name=FC868656; organism=Citrus clementina; type=EST; length=710bp
ACACCGTCTTTGATGCAAAGAGCTTGATTGGTAGGAGATTCAGCGATGCA
TCAGTCCAAGGAGATATGAAGCTATGGCCATTTAAGGTGATTGCTGGACC
AGCTGACAAGCCCATGATTGGTGTTAACTACAAGGGCGAAGAGAAGCAGT
TTGCTGCTGAGGAAATCTCGTCTATGGTGCTCATCAAGATGCGTGAGATT
GCCGAGGCTTACCTTGGCTCAACTATTAAGAATGCAGTCGTTACTGTCCC
TGCTTACTTCAATGACTCACAGAGGCAGGCCACCAAGGATGCTGGTGTCA
TTGCTGGGCTTAATGTGATGCGTATCATCAATGAGCCCACTGCTGCTGCC
ATTGCTTATGGCCTTGACAAGAAGGCTACTAGTGTGGGTGAGAAGAATGT
GTTGATCTTTGATTTGGGTGGTGGTACTTTTGATGTGTCGTTGCTCACTA
TTGAGGAGGGAATCTTTGAAGTGAAGGCTACTGCTGGAGACACTCATCTT
GGTGGTGAGGATTTTGATAACAGAATGGTGAATCATTTTGTTCAGGAGTT
TAAGAGGAAGAACAAGAAGGATATTAGTGGCAACCCTAGAGCTCTTAGGA
GATTGAGGACTGCTTGTGAGAGAGCGAAGAGGACTCTCTCCTCTACTGCC
CAGACTACAATTGAGATTGATTCTTTGTATGANGGTATTGACTTTCTACT
CACCATAACT
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