FC868656

Overview
NameFC868656
Unique NameFC868656
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length710
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: HSP7M_PEA (Heat shock 70 kDa protein, mitochondrial OS=Pisum sativum GN=HSP1 PE=2 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 1.078e-61
Identity = 124/222 (55.86%), Postives = 158/222 (71.17%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGRRF DA  Q +MK+ P+K++  P     +  N     +Q++  +I + VL K++E AEAYLG TI  AVVTVPAYFND+QRQATKDAG IAGL+V RIINEPTAAA++YG++ K     E  + +FDLGGGTFDVS+L I  G+FEVKAT GDT LGGEDFDN +++  V EFKR    D++ +  AL+RLR A E+AK  LSST+QT I +
Sbjct:  115 TLFGTKRLIGRRFDDAQTQKEMKMVPYKIVRAPNGDAWVEAN----GQQYSPSQIGAFVLTKIKETAEAYLGKTISKAVVTVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAALSYGMNNK-----EGLIAVFDLGGGTFDVSILEISNGVFEVKATNGDTFLGGEDFDNALLDFLVSEFKRTESIDLAKDKLALQRLREAAEKAKIELSSTSQTEINL 327          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_NEOSM (Chaperone protein dnaK OS=Neorickettsia sennetsu (strain Miyayama) GN=dnaK PE=2 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 1.078e-61
Identity = 120/222 (54.05%), Postives = 161/222 (72.52%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+  +K LIGRRF D  ++G  + +P+K+I        I    +   K ++  +I + VLIK++E AE Y G  +  AV+TVPAYF+D+QRQATKDAG IAGL V+RIINEPTAAA+AYGLDK AT+   KN+ +FDLGGGTFDVS+L + +G+FEVKAT GDTHLGGEDFD  ++N  V+EFK++N  D+  +P AL+RL+ A E+AK+ LSST +T I +
Sbjct:   63 TIVASKRLIGRRFKDNVIKGIQRDYPYKIIEAKNGDAWI----EAGGKSYSPSQIGANVLIKLKEAAETYTGKKVTKAVITVPAYFDDAQRQATKDAGRIAGLEVLRIINEPTAAALAYGLDKTATT---KNIAVFDLGGGTFDVSILELGDGVFEVKATNGDTHLGGEDFDRMILNFLVEEFKKENGMDLKNDPLALQRLKEAAEKAKKELSSTQETDINL 277          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_DESAH (Chaperone protein dnaK OS=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) GN=dnaK PE=2 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 1.078e-61
Identity = 124/222 (55.86%), Postives = 158/222 (71.17%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            TVF  K LIGR+F    +QGD K+ P+K+ A       I  N +G  KQ +  EISS +L  +++ AE YLG  +  AV+TVPAYFNDSQRQATKDAG IAGL V RIINEPTAA++AYGLDKK    GE+ +++FDLGGGTFDVS+L I +G+FEVK+T GDTHLGGEDFD R++++   EFK+    DI G+  AL+RL+ A E+AK  LSS  +T I +
Sbjct:   65 TVFGVKRLIGRKFDSPQIQGDKKVLPYKIEASANGDTRI--NLRG--KQHSPAEISSFILANIKKTAEDYLGEEVTEAVITVPAYFNDSQRQATKDAGKIAGLTVKRIINEPTAASLAYGLDKK----GEEKIVVFDLGGGTFDVSVLEIGDGVFEVKSTNGDTHLGGEDFDLRIIDYIADEFKKSQGIDIRGDKMALQRLKEAAEKAKMELSSAVETDINL 278          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: HSP7M_EMENI (Heat shock 70 kDa protein OS=Emericella nidulans GN=AN6010 PE=1 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 2.401e-61
Identity = 123/222 (55.41%), Postives = 164/222 (73.87%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGR+F+DA VQ D+K  P+K++          V  +GE+  ++  +I   VL KM+E AE YL   +KNAVVTVPAYFNDSQRQATKDAG IAGLNV+R++NEPTAAA+AYGL+K+A  V    V ++DLGGGTFD+S+L I++G+FEVK+T GDTHLGGEDFD  +V H VQ+FK+++  D+S +  A++R+R A E+AK  LSS+ QT I +
Sbjct:  104 TLFATKRLIGRKFTDAEVQRDIKEVPYKIVQHTNGDAW--VEARGEK--YSPAQIGGFVLGKMKETAENYLSKPVKNAVVTVPAYFNDSQRQATKDAGQIAGLNVLRVVNEPTAAALAYGLEKEADRV----VAVYDLGGGTFDISVLEIQKGVFEVKSTNGDTHLGGEDFDISLVRHIVQQFKKESGLDLSNDRMAIQRIREAAEKAKIELSSSLQTEINL 317          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_SILPO (Chaperone protein dnaK OS=Silicibacter pomeroyi GN=dnaK PE=2 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 3.135e-61
Identity = 123/220 (55.91%), Postives = 161/220 (73.18%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTI 662
            T+F  K LIGRR  DA V  D K+ PF ++ G        V  KGE+  ++  +IS+++L KM+E AE+YLG  +  AV+TVPAYFND+QRQATKDAG IAGL V+RIINEPTAAA+AYGLDKK      + + ++DLGGGTFDV++L I++G+FEVK+T GDT LGGEDFD R+VN+   EFK+++  D+SG+  AL+RL+ A E+AK  LSST QT I
Sbjct:   64 TIFGVKRLIGRRVDDAEVTKDKKMVPFTIVNGGNGDAW--VEAKGEK--YSPSQISAVILGKMKETAESYLGEEVTQAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKK----NSQTIAVYDLGGGTFDVTILEIDDGLFEVKSTNGDTFLGGEDFDMRIVNYLADEFKKEHGVDLSGDKMALQRLKEAAEKAKIELSSTTQTEI 275          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_RHOS1 (Chaperone protein dnaK OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=dnaK PE=2 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 3.135e-61
Identity = 123/220 (55.91%), Postives = 163/220 (74.09%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTI 662
            TVF  K LIGRR  DA V+ D KL P+ ++ G      + V  +GE+  ++  +IS+ +L KM+E AEAYLG T+  AV+TVPAYFND+QRQATKDAG IAGL V+RIINEPTAAA+AYGLDKK T    K + ++DLGGGTFD+++L I++G+FEVK+T GDT LGGEDFD R+VN+   EFK+++  D++ +  AL+RL+ A E+AK  LSS+ QT I
Sbjct:   64 TVFAVKRLIGRRVGDAEVEKDKKLVPYSIVNGGNGDAWVEV--RGEK--YSPSQISAFILQKMKETAEAYLGETVTQAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKKDT----KTIAVYDLGGGTFDITILEIDDGLFEVKSTNGDTFLGGEDFDMRIVNYLADEFKKEHGVDLTLDKMALQRLKEAAEKAKIELSSSQQTEI 275          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_RHOCA (Chaperone protein dnaK OS=Rhodobacter capsulatus GN=dnaK PE=2 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 3.135e-61
Identity = 122/220 (55.45%), Postives = 164/220 (74.55%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTI 662
            TVF  K LIGRR +DA V+ D KL P+ ++ G      + V  +GE+  F+  ++S+++L KM+E AE+YLG T+  AV+TVPAYFND+QRQATKDAG IAGL V+RIINEPTAAA+AYGLDKK      K + ++DLGGGTFD+S+L I++G+FEVK+T GDT LGGEDFD R+VN+   EFK+++  D++ +  AL+RL+ A E+AK  LSS +QT I
Sbjct:   64 TVFAVKRLIGRRTTDAEVEKDKKLVPYNIVDGGNGDAWVEV--RGEK--FSPAQVSAVILQKMKETAESYLGETVTQAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKK----DSKTIAVYDLGGGTFDISVLEIDDGLFEVKSTNGDTFLGGEDFDMRIVNYLADEFKKEHGVDLTKDKMALQRLKEAAEKAKIELSSASQTEI 275          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_EHRSE (Chaperone protein dnaK OS=Ehrlichia sennetsu GN=dnaK PE=2 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 4.095e-61
Identity = 118/222 (53.15%), Postives = 160/222 (72.07%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+  +K LIGRRF D  ++G  K +P+K++        I    +   K ++  ++ + VLIK++E AE Y G  +  AV+TVPAYF+D+QR ATKDAG IAGL V+RIINEPTAAA+AYGLDK AT+   KN+ +FDLGGGTFDVS+L + +G+FEVKAT GDTHLGGEDFD  ++N  V+EFK++N  D+  +P AL+RL+ A E+AK+ LSST +T I +
Sbjct:   63 TIVASKRLIGRRFKDNVIKGIQKDYPYKIVEAKNGDAWI----EAGGKSYSPSQVGANVLIKLKEAAETYTGKKVTKAVITVPAYFDDAQRTATKDAGRIAGLEVLRIINEPTAAALAYGLDKTATT---KNIAVFDLGGGTFDVSILELGDGVFEVKATNGDTHLGGEDFDRMILNFLVEEFKKENGMDLKNDPLALQRLKEAAEKAKKELSSTQETDINL 277          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_RHILW (Chaperone protein dnaK OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=dnaK PE=2 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 5.348e-61
Identity = 122/222 (54.95%), Postives = 159/222 (71.62%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGRR+ D +V+ D  L PF ++ G      +  N KG    ++  +IS+M+L KM+E AE+YLG  ++ AV+TVPAYFND+QRQATKDAG IAGL V+RIINEPTAAA+AYGLDKK      K + ++DLGGGTFD+S+L I +G+FEVK+T GDT LGGEDFD R+V + V EFKR N  D+  +  AL+RL+ A E+AK  LSS+ QT I +
Sbjct:   65 TLFAVKRLIGRRYEDPTVEKDKHLVPFTIVKGDNGDAWVEANGKG----YSPAQISAMILQKMKETAESYLGEKVEKAVITVPAYFNDAQRQATKDAGRIAGLEVLRIINEPTAAALAYGLDKKE----GKTIAVYDLGGGTFDISILEIGDGVFEVKSTNGDTFLGGEDFDMRLVEYLVGEFKRDNGIDLKNDKLALQRLKEAAEKAKIELSSSQQTEINL 278          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_RHIL3 (Chaperone protein dnaK OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=dnaK PE=2 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 5.348e-61
Identity = 122/222 (54.95%), Postives = 159/222 (71.62%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGRR+ D +V+ D  L PF ++ G      +  N KG    ++  +IS+M+L KM+E AE+YLG  ++ AV+TVPAYFND+QRQATKDAG IAGL V+RIINEPTAAA+AYGLDKK      K + ++DLGGGTFD+S+L I +G+FEVK+T GDT LGGEDFD R+V + V EFKR N  D+  +  AL+RL+ A E+AK  LSS+ QT I +
Sbjct:   65 TLFAVKRLIGRRYEDPTVEKDKHLVPFTIVKGDNGDAWVEANGKG----YSPAQISAMILQKMKETAESYLGEKVEKAVITVPAYFNDAQRQATKDAGRIAGLEVLRIINEPTAAALAYGLDKKE----GKTIAVYDLGGGTFDISILEIGDGVFEVKSTNGDTFLGGEDFDMRLVEYLVGEFKRDNGIDLKNDKLALQRLKEAAEKAKIELSSSQQTEINL 278          
The following BLAST results are available for this feature:
BLAST of FC868656 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP7M_PEA1.078e-6155.86Heat shock 70 kDa protein, mitochondrial OS=Pisum ... [more]
DNAK_NEOSM1.078e-6154.05Chaperone protein dnaK OS=Neorickettsia sennetsu (... [more]
DNAK_DESAH1.078e-6155.86Chaperone protein dnaK OS=Desulfobacterium autotro... [more]
HSP7M_EMENI2.401e-6155.41Heat shock 70 kDa protein OS=Emericella nidulans G... [more]
DNAK_SILPO3.135e-6155.91Chaperone protein dnaK OS=Silicibacter pomeroyi GN... [more]
DNAK_RHOS13.135e-6155.91Chaperone protein dnaK OS=Rhodobacter sphaeroides ... [more]
DNAK_RHOCA3.135e-6155.45Chaperone protein dnaK OS=Rhodobacter capsulatus G... [more]
DNAK_EHRSE4.095e-6153.15Chaperone protein dnaK OS=Ehrlichia sennetsu GN=dn... [more]
DNAK_RHILW5.348e-6154.95Chaperone protein dnaK OS=Rhizobium leguminosarum ... [more]
DNAK_RHIL35.348e-6154.95Chaperone protein dnaK OS=Rhizobium leguminosarum ... [more]

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Properties
Property NameValue
Genbank descriptionC31003B06EF AbioticL1 Citrus clementina cDNA clone C31003B06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868656 ID=FC868656; Name=FC868656; organism=Citrus clementina; type=EST; length=710bp
ACACCGTCTTTGATGCAAAGAGCTTGATTGGTAGGAGATTCAGCGATGCA
TCAGTCCAAGGAGATATGAAGCTATGGCCATTTAAGGTGATTGCTGGACC
AGCTGACAAGCCCATGATTGGTGTTAACTACAAGGGCGAAGAGAAGCAGT
TTGCTGCTGAGGAAATCTCGTCTATGGTGCTCATCAAGATGCGTGAGATT
GCCGAGGCTTACCTTGGCTCAACTATTAAGAATGCAGTCGTTACTGTCCC
TGCTTACTTCAATGACTCACAGAGGCAGGCCACCAAGGATGCTGGTGTCA
TTGCTGGGCTTAATGTGATGCGTATCATCAATGAGCCCACTGCTGCTGCC
ATTGCTTATGGCCTTGACAAGAAGGCTACTAGTGTGGGTGAGAAGAATGT
GTTGATCTTTGATTTGGGTGGTGGTACTTTTGATGTGTCGTTGCTCACTA
TTGAGGAGGGAATCTTTGAAGTGAAGGCTACTGCTGGAGACACTCATCTT
GGTGGTGAGGATTTTGATAACAGAATGGTGAATCATTTTGTTCAGGAGTT
TAAGAGGAAGAACAAGAAGGATATTAGTGGCAACCCTAGAGCTCTTAGGA
GATTGAGGACTGCTTGTGAGAGAGCGAAGAGGACTCTCTCCTCTACTGCC
CAGACTACAATTGAGATTGATTCTTTGTATGANGGTATTGACTTTCTACT
CACCATAACT
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