FC868656

Overview
NameFC868656
Unique NameFC868656
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length710
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: GRP75_CRIGR (Stress-70 protein, mitochondrial OS=Cricetulus griseus GN=HSPA9 PE=2 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.556e-60
Identity = 120/225 (53.33%), Postives = 159/225 (70.67%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSL 677
            T +  K LIGRR+ D  VQ D K  PFK++        +    +   K ++  +I + VL+KM+E AE YLG T KNAV+TVPAYFNDSQRQATKDAG I+GLNV+R+INEPTAAA+AYGLDK      +K + ++DLGGGTFD+S+L I++G+FEVK+T GDT LGGEDFD  ++ H V+EFKR+   D++ +  AL+R+R A E+AK  LSS+ QT I +  L
Sbjct:  116 TFYATKRLIGRRYDDPEVQKDTKNVPFKIVRASNGDAWV----EAHGKLYSPSQIGAFVLMKMKETAENYLGHTAKNAVITVPAYFNDSQRQATKDAGQISGLNVLRVINEPTAAALAYGLDKSE----DKIIAVYDLGGGTFDISILEIQKGVFEVKSTNGDTFLGGEDFDQALLRHIVKEFKRETGVDLTKDNMALQRVREAAEKAKCELSSSVQTDINLPYL 332          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_BARQU (Chaperone protein dnaK OS=Bartonella quintana GN=dnaK PE=2 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.556e-60
Identity = 122/222 (54.95%), Postives = 160/222 (72.07%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGRRF D  V+ D  L P+K++ G  D     V   G  K+++  +IS+M+L KM+E AE+YLG  ++ AV+TVPAYFND+QRQATKDAG IAGL V+RIINEPTAAA+AYGLDKK      K + ++DLGGGTFD+S+L I +G+FEVK+T GDT LGGEDFD R+V +F  EFK++   D+  +  AL+RL+ A E+AK  LSS+ QT I +
Sbjct:   65 TIFAVKRLIGRRFDDPMVEKDKALVPYKIVKG--DNGDAWVEEAG--KKYSPSQISAMILQKMKETAESYLGEKVEQAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKK----DGKTIAVYDLGGGTFDISVLEIGDGVFEVKSTNGDTFLGGEDFDMRLVGYFADEFKKEQGIDLKNDKLALQRLKEAAEKAKIELSSSQQTEINL 278          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_BARHE (Chaperone protein dnaK OS=Bartonella henselae GN=dnaK PE=2 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.556e-60
Identity = 122/222 (54.95%), Postives = 160/222 (72.07%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGRRF D  V+ D  L P+K++ G  D     V   G  K+++  +IS+M+L KM+E AE+YLG  ++ AV+TVPAYFND+QRQATKDAG IAGL V+RIINEPTAAA+AYGLDKK      K + ++DLGGGTFD+S+L I +G+FEVK+T GDT LGGEDFD R+V +F  EFK++   D+  +  AL+RL+ A E+AK  LSS+ QT I +
Sbjct:   65 TIFAVKRLIGRRFDDPMVEKDKALVPYKIVKG--DNGDAWVEEAG--KKYSPSQISAMILQKMKETAESYLGEKVEQAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKK----DGKTIAVYDLGGGTFDISVLEIGDGVFEVKSTNGDTFLGGEDFDMRLVGYFADEFKKEQGIDLKNDKLALQRLKEAAEKAKIELSSSQQTEINL 278          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_VIBPA (Chaperone protein dnaK OS=Vibrio parahaemolyticus GN=dnaK PE=2 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 2.654e-60
Identity = 121/226 (53.54%), Postives = 164/226 (72.57%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGRRF D  VQ D+++ P+K++   AD     V  KG++   AA ++S+ VL KM++ AE +LG  +  AV+TVPAYFND+QRQATKDAG IAGL V RIINEPTAAA+AYGLDKK    G++ + ++DLGGGTFD+S++ I+    E  FEV AT GDTHLGGEDFDNR++N+ V EFK++   D+  +P A++R++ A E+AK  LSST+QT + +
Sbjct:   64 TLFAIKRLIGRRFEDEEVQRDIEIMPYKIVK--ADNGDAWVEAKGQK--MAAPQVSAEVLKKMKKTAEDFLGEEVTGAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKKG---GDRTIAVYDLGGGTFDISIIEIDEVEGEKTFEVLATNGDTHLGGEDFDNRLINYLVDEFKKEQGIDLKNDPLAMQRVKEAAEKAKIELSSTSQTDVNL 282          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_JANSC (Chaperone protein dnaK OS=Jannaschia sp. (strain CCS1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 2.654e-60
Identity = 117/220 (53.18%), Postives = 161/220 (73.18%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTI 662
            T+F  K LIGRR +D  ++ D K  PF+++ G      +    K + + ++  +IS+ +L KM+E AE+YLG  +  AV+TVPAYFND+QRQATKDAG IAGL V+RIINEPTAAA+AYGLDKK T    + + ++DLGGGTFDV++L I++G+FEVK+T GDT LGGEDFD R+VN+  +EFK++N  D++ +  AL+RL+ A E+AK  LSS +QT I
Sbjct:   64 TIFGVKRLIGRRINDEHLEKDKKNLPFEIVDGGNGDAWV----KAKGETYSPSQISAFILQKMKETAESYLGEDVTQAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKKET----RTIAVYDLGGGTFDVTILEIDDGLFEVKSTNGDTFLGGEDFDMRIVNYLAEEFKKENSVDLTQDKMALQRLKEAAEKAKIELSSASQTEI 275          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_ERWCT (Chaperone protein dnaK OS=Erwinia carotovora subsp. atroseptica GN=dnaK PE=2 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 2.654e-60
Identity = 122/226 (53.98%), Postives = 160/226 (70.80%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGRRF D  VQ D  + P+K++A       + V    ++++ A  +IS+ VL KM++ AE YLG TI  AV+TVPAYFND+QRQATKDAG IAGL V RIINEPTAAA+AYGLDK+   VG + + ++DLGGGTFD+S++ I+    E  FEV AT GDTHLGGEDFDNRM+N+ V EFK++   D+  +P A++RL+ A E+AK  LSS  QT + +
Sbjct:   65 TLFAIKRLIGRRFKDEEVQRDSNIMPYKIVAADNGDAWLEV----KDQKMAPPQISAEVLKKMKKTAEDYLGETITEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKE---VGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDNRMINYLVDEFKKEQGFDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNL 283          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_SHEPW (Chaperone protein dnaK OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=dnaK PE=2 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 3.466e-60
Identity = 125/226 (55.31%), Postives = 159/226 (70.35%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            TVF  K LIGRRF D  VQ D+ + PFK+I   AD     V  +G  K+ A  +IS+ +L KM++ AE YLG  +  AV+TVPAYFNDSQRQATKDAG IAGL V RIINEPTAAA+AYG+DKK    G+  V ++DLGGGTFD+S++ I+    E  FEV AT GDTHLGGEDFDNR++N+   EFK++   D+  +P A++RL+ A E+AK  LSST QT + +
Sbjct:   64 TVFAIKRLIGRRFKDDEVQRDVDIMPFKIIG--ADNGDAWVEAQG--KKMAPPQISAEILKKMKKTAEDYLGEEVTEAVITVPAYFNDSQRQATKDAGRIAGLEVKRIINEPTAAALAYGIDKKQ---GDNIVAVYDLGGGTFDISIIEIDSVDGEQTFEVLATNGDTHLGGEDFDNRLINYLADEFKKEQSLDLRNDPLAMQRLKEAAEKAKIELSSTTQTEVNL 282          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_DESOH (Chaperone protein dnaK OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=dnaK PE=2 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 3.466e-60
Identity = 122/223 (54.71%), Postives = 163/223 (73.09%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVI-AGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            TVF  K LIGR+F  A VQ D+K+ P+K+  AG  D   + +N +  +KQ++  EISS +L  ++  AE YLG  + +AV+TVPAYF+DSQRQATKDAG IAGLNV+RIINEPTAA++AYGLDKK     ++ + +FDLGGGTFD+S+L I +G+FEVK+T GDTHLGGEDFD R+V++   EFK+    D+  +  AL+RL+ A E+AK  LSS+ QT I +
Sbjct:   65 TVFGVKRLIGRKFDSAEVQHDIKVLPYKIEKAGNGD---LRINLR--DKQYSPAEISSFILADIKHTAEEYLGEKVTDAVITVPAYFSDSQRQATKDAGKIAGLNVLRIINEPTAASLAYGLDKKK----DEKIAVFDLGGGTFDISVLEIGDGVFEVKSTNGDTHLGGEDFDLRVVDYLASEFKKDQGIDLRQDKMALQRLKEAAEKAKMELSSSPQTDINL 278          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_BARBK (Chaperone protein dnaK OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=dnaK PE=2 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 3.466e-60
Identity = 119/222 (53.60%), Postives = 159/222 (71.62%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            TVF  K LIGRRF D  V+ D  L P+K++ G      +  N     K+++  +IS+M+L KM+E AE+YLG  ++ AV+TVPAYFND+QRQATKDAG IAGL V+RIINEPTAAA+AYGLDKK      K + ++DLGGGTFD+S+L I +G+FEVK+T GDT LGGEDFD  +V++F  EFK++   D+  +  AL+RL+ A E+AK  LSS+ QT + +
Sbjct:   65 TVFAVKRLIGRRFDDPMVEKDKALVPYKIVKGDNGDAWVEEN----SKKYSPSQISAMILQKMKETAESYLGEKVEQAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKK----DGKTIAVYDLGGGTFDISVLEIGDGVFEVKSTNGDTFLGGEDFDMCLVSYFADEFKKEQGIDLKNDKLALQRLKEAAEKAKIELSSSQQTEVNL 278          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_MESSB (Chaperone protein dnaK OS=Mesorhizobium sp. (strain BNC1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 4.527e-60
Identity = 122/222 (54.95%), Postives = 160/222 (72.07%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T F  K LIGRRF D  V+ D KL P+K++   AD     V   G +  ++  +IS+M+L KM+E AE+YLG  ++ AV+TVPAYFND+QRQATKDAG IAGL V+RIINEPTAAA+AYGLDKK      K + ++DLGGGTFD+S+L I +G+FEVK+T GDT LGGEDFD R+VN+   EFK++   D+  +  AL+RL+ A E+AK  LSS++QT I +
Sbjct:   65 TFFAIKRLIGRRFEDPMVEKDKKLVPYKIVK--ADNGDAWVESHGTK--YSPSQISAMILQKMKETAESYLGEKVEKAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKKE----GKTIAVYDLGGGTFDISILEIGDGVFEVKSTNGDTFLGGEDFDMRLVNYLADEFKKEQGIDLKNDKLALQRLKEAAEKAKIELSSSSQTEINL 278          
The following BLAST results are available for this feature:
BLAST of FC868656 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GRP75_CRIGR1.556e-6053.33Stress-70 protein, mitochondrial OS=Cricetulus gri... [more]
DNAK_BARQU1.556e-6054.95Chaperone protein dnaK OS=Bartonella quintana GN=d... [more]
DNAK_BARHE1.556e-6054.95Chaperone protein dnaK OS=Bartonella henselae GN=d... [more]
DNAK_VIBPA2.654e-6053.54Chaperone protein dnaK OS=Vibrio parahaemolyticus ... [more]
DNAK_JANSC2.654e-6053.18Chaperone protein dnaK OS=Jannaschia sp. (strain C... [more]
DNAK_ERWCT2.654e-6053.98Chaperone protein dnaK OS=Erwinia carotovora subsp... [more]
DNAK_SHEPW3.466e-6055.31Chaperone protein dnaK OS=Shewanella piezotolerans... [more]
DNAK_DESOH3.466e-6054.71Chaperone protein dnaK OS=Desulfococcus oleovorans... [more]
DNAK_BARBK3.466e-6053.60Chaperone protein dnaK OS=Bartonella bacilliformis... [more]
DNAK_MESSB4.527e-6054.95Chaperone protein dnaK OS=Mesorhizobium sp. (strai... [more]

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Properties
Property NameValue
Genbank descriptionC31003B06EF AbioticL1 Citrus clementina cDNA clone C31003B06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868656 ID=FC868656; Name=FC868656; organism=Citrus clementina; type=EST; length=710bp
ACACCGTCTTTGATGCAAAGAGCTTGATTGGTAGGAGATTCAGCGATGCA
TCAGTCCAAGGAGATATGAAGCTATGGCCATTTAAGGTGATTGCTGGACC
AGCTGACAAGCCCATGATTGGTGTTAACTACAAGGGCGAAGAGAAGCAGT
TTGCTGCTGAGGAAATCTCGTCTATGGTGCTCATCAAGATGCGTGAGATT
GCCGAGGCTTACCTTGGCTCAACTATTAAGAATGCAGTCGTTACTGTCCC
TGCTTACTTCAATGACTCACAGAGGCAGGCCACCAAGGATGCTGGTGTCA
TTGCTGGGCTTAATGTGATGCGTATCATCAATGAGCCCACTGCTGCTGCC
ATTGCTTATGGCCTTGACAAGAAGGCTACTAGTGTGGGTGAGAAGAATGT
GTTGATCTTTGATTTGGGTGGTGGTACTTTTGATGTGTCGTTGCTCACTA
TTGAGGAGGGAATCTTTGAAGTGAAGGCTACTGCTGGAGACACTCATCTT
GGTGGTGAGGATTTTGATAACAGAATGGTGAATCATTTTGTTCAGGAGTT
TAAGAGGAAGAACAAGAAGGATATTAGTGGCAACCCTAGAGCTCTTAGGA
GATTGAGGACTGCTTGTGAGAGAGCGAAGAGGACTCTCTCCTCTACTGCC
CAGACTACAATTGAGATTGATTCTTTGTATGANGGTATTGACTTTCTACT
CACCATAACT
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