FC868656

Overview
NameFC868656
Unique NameFC868656
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length710
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_AGRT5 (Chaperone protein dnaK OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=dnaK PE=2 SV=2)

HSP 1 Score: 231.106 bits (588), Expect = 4.527e-60
Identity = 118/222 (53.15%), Postives = 160/222 (72.07%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGRR+ D +V+ D  L PF+++ G      +    K ++K ++  +IS+M+L KM+E AE+YLG  ++ AV+TVPAYFND+QRQATKDAG IAGL+V+RIINEPTAAA+AYGLDKK      K + ++DLGGGTFD+S+L I +G+FEVK+T GDT LGGEDFD R+V +   EFK+    D+  +  AL+RL+ A E+AK  LSS+ QT I +
Sbjct:   65 TLFAVKRLIGRRYEDPTVEKDKALVPFEIVKGDNGDAWV----KAQDKNYSPSQISAMILQKMKETAESYLGEKVEKAVITVPAYFNDAQRQATKDAGRIAGLDVLRIINEPTAAALAYGLDKKE----GKTIAVYDLGGGTFDISVLEIGDGVFEVKSTNGDTFLGGEDFDMRLVEYLAGEFKKDQGIDLKNDKLALQRLKEAAEKAKIELSSSQQTEINL 278          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK1_PHOPR (Chaperone protein dnaK 1 OS=Photobacterium profundum GN=dnaK1 PE=2 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 4.527e-60
Identity = 120/226 (53.10%), Postives = 163/226 (72.12%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T++  K LIGRRF D  VQ D+K+ PFK++   AD     V  KG++   AA ++S+ +L KM++ AE +LG  +  AV+TVPAYFND+QRQATKDAG IAGL V RIINEPTAAA+AYGLDKK    G++ + ++DLGGGTFD+S++ I+    E  FEV +T GDTHLGGEDFDNR++N+ V+EFK++   D+  +P A++RL+ A E+AK  LSS  QT + +
Sbjct:   65 TLYAIKRLIGRRFEDEEVQRDLKIMPFKIVK--ADNGDAWVEAKGQK--MAAPQVSAEILKKMKKTAEDFLGEEVTAAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKKG---GDRTIAVYDLGGGTFDISIIEIDEVEGEKTFEVLSTNGDTHLGGEDFDNRLINYLVEEFKKEQGMDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNL 283          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_PECCP (Chaperone protein dnaK OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 5.913e-60
Identity = 122/226 (53.98%), Postives = 160/226 (70.80%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGRRF D  VQ D  + P+K+IA       + V    ++++ A  +IS+ VL KM++ AE YLG TI  AV+TVPAYFND+QRQATKDAG IAGL V RIINEPTAAA+AYGLDK+   VG + + ++DLGGGTFD+S++ I+    E  FEV AT GDTHLGGEDFD+RM+N+ V EFK++   D+  +P A++RL+ A E+AK  LSS  QT + +
Sbjct:   65 TLFAIKRLIGRRFKDEEVQRDANIMPYKIIAADNGDAWLEV----KDQKMAPPQISAEVLKKMKKTAEDYLGETISEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKE---VGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRMINYLVDEFKKEQGFDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNL 283          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_GEOSL (Chaperone protein dnaK OS=Geobacter sulfurreducens GN=dnaK PE=2 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 5.913e-60
Identity = 120/222 (54.05%), Postives = 162/222 (72.97%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGR++    V+ D+ + PFK++   AD     V  +G  K ++A EIS+MVL KM++ AE YLG T+ +AV+TVPAYFNDSQRQATKDAG IAGLNV+RIINEPTAAA+AYGLDKK     ++ + +FDLGGGTFD+S+L + +G+FEVK+T GDT LGGEDFD R+++    EFK+    D+ G+  AL+RL+ A E+AK  LS++ +T I +
Sbjct:   65 TLFAIKRLIGRKYDTEEVRKDISISPFKIVK--ADNGDAWVEARG--KMYSAPEISAMVLQKMKQTAEDYLGETVTDAVITVPAYFNDSQRQATKDAGKIAGLNVLRIINEPTAAALAYGLDKKK----DEKIAVFDLGGGTFDISILELGDGVFEVKSTNGDTFLGGEDFDQRVIDWIADEFKKDQGIDLRGDKMALQRLKEAAEKAKCELSTSMETDINL 278          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_SHELP (Chaperone protein dnaK OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=dnaK PE=2 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 7.722e-60
Identity = 120/226 (53.10%), Postives = 157/226 (69.47%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T F  K LIGRRF D  VQ D+ + PFK+IA       +    +  +K+ A  ++S+ +L KM++ AE YLG  +  AV+TVPAYFNDSQRQATKDAG IAGL V RIINEPTAAA+AYG+DKK    G+  V ++DLGGGTFD+S++ I+    E  FEV AT GDTHLGGEDFDNR++N+   EFK++   D+  +P A++RL+ A E+AK  LSST QT + +
Sbjct:   64 TFFAIKRLIGRRFKDDEVQRDVDIMPFKIIAADNGDAWV----EAHDKKMAPPQVSAEILKKMKKTAEDYLGEPVTEAVITVPAYFNDSQRQATKDAGRIAGLEVKRIINEPTAAALAYGIDKKQ---GDNIVAVYDLGGGTFDISIIEIDSVDGEQTFEVLATNGDTHLGGEDFDNRLINYLADEFKKEQSLDLRNDPLAMQRLKEAAEKAKIELSSTTQTEVNL 282          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_RHILO (Chaperone protein dnaK OS=Rhizobium loti GN=dnaK PE=2 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 7.722e-60
Identity = 121/222 (54.50%), Postives = 158/222 (71.17%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGRR+ D   + D KL P+K++ G      +     G +KQ +  +IS+M+L KM+E AEAYLG  ++ AV+TVPAYFND+QRQATKDAG IAGL V+RIINEPTAAA+AYGLDKK      K + ++DLGGGTFD+S+L I +G+FEVK+T GDT LGGEDFD R+V +   EFK++   D+  +  AL+RL+ A E+AK  LSST QT I +
Sbjct:   65 TIFAVKRLIGRRYDDPVTEKDKKLVPYKIVKGDNGDAWVEA---GGKKQ-SPSQISAMILQKMKETAEAYLGEKVEKAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKK----DGKTIAVYDLGGGTFDISVLEIGDGVFEVKSTNGDTFLGGEDFDMRLVEYLAAEFKKEQGIDLKNDKLALQRLKEAAEKAKIELSSTTQTEINL 278          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_PARDP (Chaperone protein dnaK OS=Paracoccus denitrificans (strain Pd 1222) GN=dnaK PE=2 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 1.009e-59
Identity = 119/220 (54.09%), Postives = 163/220 (74.09%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTI 662
            TVF  K LIGRR +DA V+ D KL P+ ++ G      + V  +G++  ++  +IS+ +L KM+E AE+YLG  +  AV+TVPAYFND+QRQATKDAG IAGL V+RIINEPTAAA+AYGLDKK      K + ++DLGGGTFD+++L I++G+FEVK+T GDT LGGEDFD R+VN+   EFK+++  D++ +  AL+RL+ A E+AK  LSS++QT I
Sbjct:   64 TVFAVKRLIGRRTTDAEVEKDKKLVPYAIVDGGNGDAWVEV--RGDK--YSPSQISAFILQKMKETAESYLGEPVTQAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKK----DSKTIAVYDLGGGTFDITILEIDDGLFEVKSTNGDTFLGGEDFDMRIVNYLADEFKKEHGVDLTKDKMALQRLKEAAEKAKIELSSSSQTEI 275          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_DESAA (Chaperone protein dnaK OS=Desulfatibacillum alkenivorans (strain AK-01) GN=dnaK PE=2 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 1.009e-59
Identity = 115/222 (51.80%), Postives = 162/222 (72.97%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            TVF  K LIGR+F+   V+ DM + P++++ G      I +    + K+++ +EISS +L  +++ AE YLG T+ +AV+TVPAYFNDSQRQATKDAG IAGLNV+RIINEPTAA++AYGLDKK+    ++ + +FDLGGGTFDVS+L I EG+FEVK+T GDTHLGGEDFD  ++++   EFK+    D+  +  AL+RL+ A E+AK  LS++ +T + +
Sbjct:   65 TVFAVKRLIGRKFASQQVKDDMNVLPYQIVDGDNGDAYIEL----QGKKYSPQEISSFILAYIKKAAEEYLGETVTDAVITVPAYFNDSQRQATKDAGKIAGLNVLRIINEPTAASLAYGLDKKS----DEKIAVFDLGGGTFDVSILEIGEGVFEVKSTNGDTHLGGEDFDLLVIDYLADEFKKDQGIDLRSDKMALQRLKEAAEKAKMELSTSVETEVNL 278          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: GRP75_CHICK (Stress-70 protein, mitochondrial OS=Gallus gallus GN=HSPA9 PE=1 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.317e-59
Identity = 118/225 (52.44%), Postives = 160/225 (71.11%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSL 677
            T +  K LIGRRF D+ V+ D+K  PFK++        +    +   K ++  +I + VL+KM+E AE YLG   KNAV+TVPAYFNDSQRQATKDAG I+GLNV+R+INEPTAAA+AYGLDK      +K + ++DLGGGTFD+S+L I++G+FEVK+T GDT LGGEDFD  ++ + V+EFKR+   D++ +  AL+R+R A E+AK  LSS+ QT I +  L
Sbjct:  118 TFYATKRLIGRRFDDSEVKKDIKNVPFKIVRASNGDAWV----EAHGKLYSPSQIGAFVLMKMKETAENYLGHPAKNAVITVPAYFNDSQRQATKDAGQISGLNVLRVINEPTAAALAYGLDKSE----DKIIAVYDLGGGTFDISILEIQKGVFEVKSTNGDTFLGGEDFDQALLQYIVKEFKRETSVDLTKDNMALQRVREASEKAKCELSSSVQTDINLPYL 334          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_HYPNA (Chaperone protein dnaK OS=Hyphomonas neptunium (strain ATCC 15444) GN=dnaK PE=2 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.317e-59
Identity = 118/222 (53.15%), Postives = 154/222 (69.37%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T +  K LIGR F D + Q D  + PF ++  P     +    KG +K ++ +EIS+ +L KM+E AEAYLGS +  AV+TVPAYFND+QRQATKDAG IAGL V+RIINEPTAAA+AYGLDK     G K + ++DLGGGTFDVSLL I +G+FEV +T GDT LGGEDFD R+V+    EFK++   D+ G+  AL+RL+   E+AK+ LSS  Q  + +
Sbjct:   65 TFYAIKRLIGRTFDDPTAQKDKAMSPFSIVKAPNGDAWV----KGRDKDYSPQEISAFILTKMKETAEAYLGSKVTQAVITVPAYFNDAQRQATKDAGRIAGLEVLRIINEPTAAALAYGLDKG----GNKTIAVYDLGGGTFDVSLLEIGDGVFEVLSTNGDTFLGGEDFDLRVVDFLASEFKKEQGIDLKGDKLALQRLKEEAEKAKKELSSATQYEVNL 278          
The following BLAST results are available for this feature:
BLAST of FC868656 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_AGRT54.527e-6053.15Chaperone protein dnaK OS=Agrobacterium tumefacien... [more]
DNAK1_PHOPR4.527e-6053.10Chaperone protein dnaK 1 OS=Photobacterium profund... [more]
DNAK_PECCP5.913e-6053.98Chaperone protein dnaK OS=Pectobacterium carotovor... [more]
DNAK_GEOSL5.913e-6054.05Chaperone protein dnaK OS=Geobacter sulfurreducens... [more]
DNAK_SHELP7.722e-6053.10Chaperone protein dnaK OS=Shewanella loihica (stra... [more]
DNAK_RHILO7.722e-6054.50Chaperone protein dnaK OS=Rhizobium loti GN=dnaK P... [more]
DNAK_PARDP1.009e-5954.09Chaperone protein dnaK OS=Paracoccus denitrificans... [more]
DNAK_DESAA1.009e-5951.80Chaperone protein dnaK OS=Desulfatibacillum alkeni... [more]
GRP75_CHICK1.317e-5952.44Stress-70 protein, mitochondrial OS=Gallus gallus ... [more]
DNAK_HYPNA1.317e-5953.15Chaperone protein dnaK OS=Hyphomonas neptunium (st... [more]

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Properties
Property NameValue
Genbank descriptionC31003B06EF AbioticL1 Citrus clementina cDNA clone C31003B06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868656 ID=FC868656; Name=FC868656; organism=Citrus clementina; type=EST; length=710bp
ACACCGTCTTTGATGCAAAGAGCTTGATTGGTAGGAGATTCAGCGATGCA
TCAGTCCAAGGAGATATGAAGCTATGGCCATTTAAGGTGATTGCTGGACC
AGCTGACAAGCCCATGATTGGTGTTAACTACAAGGGCGAAGAGAAGCAGT
TTGCTGCTGAGGAAATCTCGTCTATGGTGCTCATCAAGATGCGTGAGATT
GCCGAGGCTTACCTTGGCTCAACTATTAAGAATGCAGTCGTTACTGTCCC
TGCTTACTTCAATGACTCACAGAGGCAGGCCACCAAGGATGCTGGTGTCA
TTGCTGGGCTTAATGTGATGCGTATCATCAATGAGCCCACTGCTGCTGCC
ATTGCTTATGGCCTTGACAAGAAGGCTACTAGTGTGGGTGAGAAGAATGT
GTTGATCTTTGATTTGGGTGGTGGTACTTTTGATGTGTCGTTGCTCACTA
TTGAGGAGGGAATCTTTGAAGTGAAGGCTACTGCTGGAGACACTCATCTT
GGTGGTGAGGATTTTGATAACAGAATGGTGAATCATTTTGTTCAGGAGTT
TAAGAGGAAGAACAAGAAGGATATTAGTGGCAACCCTAGAGCTCTTAGGA
GATTGAGGACTGCTTGTGAGAGAGCGAAGAGGACTCTCTCCTCTACTGCC
CAGACTACAATTGAGATTGATTCTTTGTATGANGGTATTGACTTTCTACT
CACCATAACT
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