FC868656

Overview
NameFC868656
Unique NameFC868656
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length710
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_GEOSM (Chaperone protein dnaK OS=Geobacter sp. (strain M21) GN=dnaK PE=2 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.317e-59
Identity = 119/222 (53.60%), Postives = 164/222 (73.87%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T++  K LIGR+F   +V+ D+ + PFK++   AD     V  +G++  ++  EIS+MVL KM++ AE YLG T+ +AV+TVPAYF+DSQRQATKDAG IAGLNV+RIINEPTAAA+AYGLDKK     ++ + +FDLGGGTFDVS+L + EG+FEVK+T GDT LGGEDFD ++++H   EFK+    D+ G+  AL+RL+ A E+AK  LS++ +T I +
Sbjct:   65 TLYAIKRLIGRKFDTEAVKKDIAISPFKIVK--ADNSDAWVEVRGQK--YSPPEISAMVLQKMKKTAEDYLGETVTDAVITVPAYFDDSQRQATKDAGKIAGLNVLRIINEPTAAALAYGLDKKK----DEKIAVFDLGGGTFDVSILELGEGVFEVKSTNGDTFLGGEDFDQKIIDHIADEFKKDQGIDLRGDKMALQRLKEAGEKAKCELSTSLETDINL 278          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_DESPS (Chaperone protein dnaK OS=Desulfotalea psychrophila GN=dnaK PE=2 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.317e-59
Identity = 123/222 (55.41%), Postives = 158/222 (71.17%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            TV+ AK LIGR+F+DA VQ   ++ PF ++ G +    I V    E  ++   EIS+MVL KM++ AE YLG  +  AVVTVPAYFNDSQRQATKDAG IAGL+V RIINEPTAA++AYGLDKK     E+ + +FDLGGGTFDVS+L I +G+FEVK+T GDT LGGEDFD R+V+    EFKR+   D+  +  AL+RL+   E+AK  LS+T +T I +
Sbjct:   65 TVYAAKRLIGRKFTDAEVQRSQEVSPFDIVEGISGSVAIQV----EGHKYRPAEISAMVLGKMKQTAEEYLGEEVTEAVVTVPAYFNDSQRQATKDAGKIAGLDVKRIINEPTAASLAYGLDKKV----EEKIAVFDLGGGTFDVSVLEIGDGVFEVKSTNGDTFLGGEDFDMRIVHWLADEFKREQGIDLRSDKMALQRLKEEAEKAKMELSTTVETDINL 278          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_BRUSU (Chaperone protein dnaK OS=Brucella suis GN=dnaK PE=2 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.317e-59
Identity = 120/222 (54.05%), Postives = 159/222 (71.62%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGRR+ D  V  D  L P+K++ G      + V+     K+++  +IS+M+L KM+E AE+YLG T+  AV+TVPAYFND+QRQATKDAG IAGL V+RIINEPTAAA+AYGLDK       K + ++DLGGGTFDVS+L I +G+FEVK+T GDT LGGEDFD R+V + V EFK+++  D+  +  AL+RL+ A E+AK  LSS+ QT I +
Sbjct:   65 TLFAVKRLIGRRYDDPMVTKDKDLVPYKIVKGDNGDAWVEVH----GKKYSPSQISAMILQKMKETAESYLGETVTQAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKSE----GKTIAVYDLGGGTFDVSVLEIGDGVFEVKSTNGDTFLGGEDFDIRLVEYLVAEFKKESGIDLKNDKLALQRLKEAAEKAKIELSSSQQTEINL 278          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_BRUO2 (Chaperone protein dnaK OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=dnaK PE=2 SV=2)

HSP 1 Score: 229.565 bits (584), Expect = 1.317e-59
Identity = 120/222 (54.05%), Postives = 159/222 (71.62%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGRR+ D  V  D  L P+K++ G      + V+     K+++  +IS+M+L KM+E AE+YLG T+  AV+TVPAYFND+QRQATKDAG IAGL V+RIINEPTAAA+AYGLDK       K + ++DLGGGTFDVS+L I +G+FEVK+T GDT LGGEDFD R+V + V EFK+++  D+  +  AL+RL+ A E+AK  LSS+ QT I +
Sbjct:   65 TLFAVKRLIGRRYDDPMVTKDKDLVPYKIVKGDNGDAWVEVH----GKKYSPSQISAMILQKMKETAESYLGETVTQAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKSE----GKTIAVYDLGGGTFDVSVLEIGDGVFEVKSTNGDTFLGGEDFDIRLVEYLVAEFKKESGIDLKNDKLALQRLKEAAEKAKIELSSSQQTEINL 278          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_BRUME (Chaperone protein dnaK OS=Brucella melitensis GN=dnaK PE=2 SV=2)

HSP 1 Score: 229.565 bits (584), Expect = 1.317e-59
Identity = 120/222 (54.05%), Postives = 159/222 (71.62%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGRR+ D  V  D  L P+K++ G      + V+     K+++  +IS+M+L KM+E AE+YLG T+  AV+TVPAYFND+QRQATKDAG IAGL V+RIINEPTAAA+AYGLDK       K + ++DLGGGTFDVS+L I +G+FEVK+T GDT LGGEDFD R+V + V EFK+++  D+  +  AL+RL+ A E+AK  LSS+ QT I +
Sbjct:   65 TLFAVKRLIGRRYDDPMVTKDKDLVPYKIVKGDNGDAWVEVH----GKKYSPSQISAMILQKMKETAESYLGETVTQAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKSE----GKTIAVYDLGGGTFDVSVLEIGDGVFEVKSTNGDTFLGGEDFDIRLVEYLVAEFKKESGIDLKNDKLALQRLKEAAEKAKIELSSSQQTEINL 278          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_BRUAB (Chaperone protein dnaK OS=Brucella abortus GN=dnaK PE=2 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.317e-59
Identity = 120/222 (54.05%), Postives = 159/222 (71.62%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGRR+ D  V  D  L P+K++ G      + V+     K+++  +IS+M+L KM+E AE+YLG T+  AV+TVPAYFND+QRQATKDAG IAGL V+RIINEPTAAA+AYGLDK       K + ++DLGGGTFDVS+L I +G+FEVK+T GDT LGGEDFD R+V + V EFK+++  D+  +  AL+RL+ A E+AK  LSS+ QT I +
Sbjct:   65 TLFAVKRLIGRRYDDPMVTKDKDLVPYKIVKGDNGDAWVEVH----GKKYSPSQISAMILQKMKETAESYLGETVTQAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKSE----GKTIAVYDLGGGTFDVSVLEIGDGVFEVKSTNGDTFLGGEDFDIRLVEYLVAEFKKESGIDLKNDKLALQRLKEAAEKAKIELSSSQQTEINL 278          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK2_PHOPR (Chaperone protein dnaK 2 OS=Photobacterium profundum GN=dnaK2 PE=2 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.317e-59
Identity = 121/226 (53.54%), Postives = 162/226 (71.68%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K L+GRRF D  VQ D+++ PF ++   AD     V  KG  K+ AA ++S+ VL KM++ AE YLG  +  AV+TVPAYFND+QRQATKDAG IAGL+V RIINEPTAAA+AYGLDK+    GE+ + ++DLGGGTFD+S++ I+    E  FEV +T GDTHLGGEDFDNRM+N+ V EFK++   D+  +P A++R++ A E+AK  LSS  QT + +
Sbjct:   65 TLFAIKRLLGRRFEDEEVQRDIEIMPFNIVK--ADNGDAWVEAKG--KKMAAPQVSAEVLKKMKKTAEDYLGEEVTGAVITVPAYFNDAQRQATKDAGRIAGLDVKRIINEPTAAALAYGLDKQG---GERTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLSTNGDTHLGGEDFDNRMINYLVGEFKKEQGIDLKSDPLAMQRVKEAAEKAKIELSSAQQTDVNL 283          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_GEOMG (Chaperone protein dnaK OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=dnaK PE=2 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 1.720e-59
Identity = 119/222 (53.60%), Postives = 162/222 (72.97%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGR+F    V+ D+ + PFK++   AD     V+ +G  K ++  E+S++VL KM++ AE YLG T+ +AV+TVPAYFNDSQRQATKDAG IAGLNV+RIINEPTAAA+AYGLDKK     ++ + +FDLGGGTFD+S+L + +G+FEVK+T GDT LGGEDFD R+++    EFK+    D+ G+  AL+RL+ A E+AK  LSS+ +T I +
Sbjct:   65 TLFAIKRLIGRKFDTDEVRKDISISPFKIVK--ADNGDAWVDVRG--KMYSPPEVSAIVLQKMKKTAEDYLGETVTDAVITVPAYFNDSQRQATKDAGKIAGLNVLRIINEPTAAALAYGLDKKK----DEKIAVFDLGGGTFDISILELGDGVFEVKSTNGDTFLGGEDFDQRVIDWIADEFKKDQGIDLRGDKMALQRLKEAAEKAKCELSSSMETDINL 278          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: HSP7M_SOLTU (Heat shock 70 kDa protein, mitochondrial OS=Solanum tuberosum GN=HSP68 PE=2 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 2.247e-59
Identity = 121/222 (54.50%), Postives = 154/222 (69.37%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+   K LIGRRF D   Q +MK+ P+K++ G      +  N     +Q++  +I + +L KM+E AEAYLG +I  AV+TVPAYFND+QRQA KDAG IAGL+V RIINEPTAAA++YG++ K     E  V +FDLGGGTFDVS+L I  G+FEVKAT GDT LGGEDFDN ++   V EFKR    D+S +  AL+RLR A E+AK  LSST+QT I +
Sbjct:  120 TLSGTKRLIGRRFDDPQTQKEMKMVPYKIVRGSNGDAWVEAN----GQQYSPTQIGAFILTKMKETAEAYLGKSINKAVITVPAYFNDAQRQAIKDAGAIAGLDVQRIINEPTAAALSYGMNSK-----EGLVAVFDLGGGTFDVSILEISNGVFEVKATNGDTFLGGEDFDNALLEFLVSEFKRTEGIDLSKDKLALQRLREAAEKAKIELSSTSQTDINL 332          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_VIBPR (Chaperone protein dnaK OS=Vibrio proteolyticus GN=dnaK PE=2 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 2.247e-59
Identity = 120/226 (53.10%), Postives = 163/226 (72.12%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGRRF D  VQ D+++ P+K++   AD     V  KG++   AA ++S+ VL KM++ AE +LG  +  AV+TVPAYFND+QRQATKDAG IAGL V RIINEPTAAA+AYGLDKK    G++ + ++DLGGGTFD+S++ I+    E  FEV AT GDTHLGGEDFDNR++N+ V EFK++   D+  +P A++R++ A E+AK  LS T+QT + +
Sbjct:   64 TLFAIKRLIGRRFEDEEVQRDIEIMPYKIVK--ADNGDAWVEAKGQK--MAAPQVSAEVLKKMKKTAEDFLGEEVTGAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKKG---GDRTIAVYDLGGGTFDISIIEIDEVEGEKTFEVLATNGDTHLGGEDFDNRLINYLVDEFKKEQGIDLKTDPLAMQRVKEAAEKAKIELSFTSQTDVNL 282          
The following BLAST results are available for this feature:
BLAST of FC868656 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_GEOSM1.317e-5953.60Chaperone protein dnaK OS=Geobacter sp. (strain M2... [more]
DNAK_DESPS1.317e-5955.41Chaperone protein dnaK OS=Desulfotalea psychrophil... [more]
DNAK_BRUSU1.317e-5954.05Chaperone protein dnaK OS=Brucella suis GN=dnaK PE... [more]
DNAK_BRUO21.317e-5954.05Chaperone protein dnaK OS=Brucella ovis (strain AT... [more]
DNAK_BRUME1.317e-5954.05Chaperone protein dnaK OS=Brucella melitensis GN=d... [more]
DNAK_BRUAB1.317e-5954.05Chaperone protein dnaK OS=Brucella abortus GN=dnaK... [more]
DNAK2_PHOPR1.317e-5953.54Chaperone protein dnaK 2 OS=Photobacterium profund... [more]
DNAK_GEOMG1.720e-5953.60Chaperone protein dnaK OS=Geobacter metallireducen... [more]
HSP7M_SOLTU2.247e-5954.50Heat shock 70 kDa protein, mitochondrial OS=Solanu... [more]
DNAK_VIBPR2.247e-5953.10Chaperone protein dnaK OS=Vibrio proteolyticus GN=... [more]

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Properties
Property NameValue
Genbank descriptionC31003B06EF AbioticL1 Citrus clementina cDNA clone C31003B06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868656 ID=FC868656; Name=FC868656; organism=Citrus clementina; type=EST; length=710bp
ACACCGTCTTTGATGCAAAGAGCTTGATTGGTAGGAGATTCAGCGATGCA
TCAGTCCAAGGAGATATGAAGCTATGGCCATTTAAGGTGATTGCTGGACC
AGCTGACAAGCCCATGATTGGTGTTAACTACAAGGGCGAAGAGAAGCAGT
TTGCTGCTGAGGAAATCTCGTCTATGGTGCTCATCAAGATGCGTGAGATT
GCCGAGGCTTACCTTGGCTCAACTATTAAGAATGCAGTCGTTACTGTCCC
TGCTTACTTCAATGACTCACAGAGGCAGGCCACCAAGGATGCTGGTGTCA
TTGCTGGGCTTAATGTGATGCGTATCATCAATGAGCCCACTGCTGCTGCC
ATTGCTTATGGCCTTGACAAGAAGGCTACTAGTGTGGGTGAGAAGAATGT
GTTGATCTTTGATTTGGGTGGTGGTACTTTTGATGTGTCGTTGCTCACTA
TTGAGGAGGGAATCTTTGAAGTGAAGGCTACTGCTGGAGACACTCATCTT
GGTGGTGAGGATTTTGATAACAGAATGGTGAATCATTTTGTTCAGGAGTT
TAAGAGGAAGAACAAGAAGGATATTAGTGGCAACCCTAGAGCTCTTAGGA
GATTGAGGACTGCTTGTGAGAGAGCGAAGAGGACTCTCTCCTCTACTGCC
CAGACTACAATTGAGATTGATTCTTTGTATGANGGTATTGACTTTCTACT
CACCATAACT
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