FC868656

Overview
NameFC868656
Unique NameFC868656
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length710
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: HSP7E_YEAST (Heat shock protein SSC3, mitochondrial OS=Saccharomyces cerevisiae GN=ECM10 PE=1 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 6.537e-59
Identity = 116/222 (52.25%), Postives = 153/222 (68.92%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGRRF DA VQ D+   PFK++        +    +   + ++  +I   +L KM+E AEAYL  ++KNAVVTVPAYFND+QRQATKDAG I GLNV+R++NEPTAAA+AYGLDK    V    + +FDLGGGTFD+S+L I+ GIFEVK+T GDTHLGGEDFD  ++   +  FK++   D+S +  A++R+R A E+AK  LSST  T I +
Sbjct:   90 TLFATKRLIGRRFEDAEVQRDINQVPFKIVKHSNGDAWV----EARNRTYSPAQIGGFILNKMKETAEAYLAKSVKNAVVTVPAYFNDAQRQATKDAGQIIGLNVLRVVNEPTAAALAYGLDKSEPKV----IAVFDLGGGTFDISILDIDNGIFEVKSTNGDTHLGGEDFDIYLLQEIISHFKKETGIDLSNDRMAVQRIREAAEKAKIELSSTLSTEINL 303          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_VIBSL (Chaperone protein dnaK OS=Vibrio splendidus (strain LGP32) GN=dnaK PE=2 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 6.537e-59
Identity = 119/226 (52.65%), Postives = 163/226 (72.12%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T++  K LIGRRF D  VQ D+++ PF ++   AD     V  +G++   AA ++S+ VL KM++ AE +LG  +  AVVTVPAYFND+QRQATKDAG IAGL+V RIINEPTAAA+AYGLDK+    G++ + ++DLGGGTFD+S++ I+    E  FEV +T GDTHLGGEDFDNRM+N+ V EFK++   D+  +P A++R++ A E+AK  LSST QT + +
Sbjct:   64 TLYAIKRLIGRRFEDEEVQRDIEIMPFNIVK--ADNGDAWVEAQGQK--MAAPQVSAEVLKKMKKTAEDFLGEEVTGAVVTVPAYFNDAQRQATKDAGRIAGLDVKRIINEPTAAALAYGLDKQG---GDRTIAVYDLGGGTFDISIIEIDEVEGEKTFEVLSTNGDTHLGGEDFDNRMINYLVDEFKKEQGIDLKADPLAMQRVKEAAEKAKIELSSTTQTDVNL 282          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_SHEPA (Chaperone protein dnaK OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 6.537e-59
Identity = 123/226 (54.42%), Postives = 159/226 (70.35%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            TVF  K LIGRRF D  VQ D+ + PFK+I+  AD     V  +G  ++ A  +IS+ +L KM++ AE +LG  +  AV+TVPAYFNDSQRQATKDAG IAGL V RIINEPTAAA+AYG+DKK    G+  V ++DLGGGTFD+S++ I+    E  FEV AT GDTHLGGEDFDNRM+ +   EFK++   D+  +P A++RL+ A E+AK  LSST QT + +
Sbjct:   64 TVFAIKRLIGRRFKDDEVQRDVDIMPFKIIS--ADNGDAWVEAQG--RKMAPPQISAEILKKMKKTAEDFLGEEVTEAVITVPAYFNDSQRQATKDAGRIAGLEVKRIINEPTAAALAYGIDKKQ---GDNIVAVYDLGGGTFDISIIEIDSVDGEQTFEVLATNGDTHLGGEDFDNRMIKYLADEFKKEQGLDLRNDPLAMQRLKEAAEKAKIELSSTTQTEVNL 282          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_SHEHH (Chaperone protein dnaK OS=Shewanella halifaxensis (strain HAW-EB4) GN=dnaK PE=2 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 6.537e-59
Identity = 123/226 (54.42%), Postives = 159/226 (70.35%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            TV+  K LIGRRF D  VQ D+ + PFK+I+  AD     V  +G  K+ A  +IS+ +L KM++ AE +LG  +  AV+TVPAYFNDSQRQATKDAG IAGL V RIINEPTAAA+AYG+DKK    G+  V ++DLGGGTFD+S++ I+    E  FEV AT GDTHLGGEDFDNRM+ +   EFK++   D+  +P A++RL+ A E+AK  LSST QT + +
Sbjct:   64 TVYAIKRLIGRRFKDDEVQRDVDIMPFKIIS--ADNGDAWVEAQG--KKMAPPQISAEILKKMKKTAEDFLGEEVTEAVITVPAYFNDSQRQATKDAGRIAGLEVKRIINEPTAAALAYGIDKKQ---GDNIVAVYDLGGGTFDISIIEIDSVDGEQTFEVLATNGDTHLGGEDFDNRMIKYLADEFKKEQGLDLRNDPLAMQRLKEAAEKAKIELSSTTQTEVNL 282          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_METSB (Chaperone protein dnaK OS=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) GN=dnaK PE=2 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 6.537e-59
Identity = 119/222 (53.60%), Postives = 154/222 (69.37%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T F  K LIGR + D   + DM L P+K+I        +    + + KQ++  +IS+ +L KM+E AEAYLG  +  AV+TVPAYFND+QRQATKDAG IAGL V+RIINEPTAAA+AYGLDKK   V    + ++DLGGGTFDVS+L I +G+FEVK+T GDT LGGEDFD R+V +   EFK++N  D+  +  AL+RL+ A E+AK  LSS  QT I +
Sbjct:   65 TFFAIKRLIGRTYDDPMTKKDMGLVPYKIIRASNGDAWV----EADGKQYSPSQISAFILQKMKETAEAYLGQPVSQAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKKGAGV----IAVYDLGGGTFDVSILEIGDGVFEVKSTNGDTFLGGEDFDVRLVEYLADEFKKENGIDLKKDKLALQRLKEAAEKAKIELSSATQTEINL 278          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_BUCBP (Chaperone protein dnaK OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=dnaK PE=2 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 6.537e-59
Identity = 118/226 (52.21%), Postives = 160/226 (70.80%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGR+F+D  VQ D+K+ P+K+I        I +    + K+ A  +IS+ +L KM++ AE YLG +I+ AV+TVPAYFND+QRQATKDAG IAGL V RIINEPTAAA+AYGLDK     G K + ++DLGGGTFD+S++ I+    E  FEV AT GDTHLGGEDFDNR++N+ V++FK+    D+  +  A++RL+ + E+AK  LSST QT + +
Sbjct:   65 TLFAIKRLIGRKFTDNEVQRDIKIMPYKIIQSENGDAWINI----KNKKLAPPQISAEILKKMKKTAEDYLGESIQEAVITVPAYFNDAQRQATKDAGRIAGLKVKRIINEPTAAALAYGLDK---GKGNKTIAVYDLGGGTFDISIIEIDDVDKEKTFEVLATNGDTHLGGEDFDNRLINYLVEDFKKDQGTDLRNDSLAMQRLKESAEKAKIELSSTQQTDVNL 283          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_SERP5 (Chaperone protein dnaK OS=Serratia proteamaculans (strain 568) GN=dnaK PE=2 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 8.538e-59
Identity = 121/226 (53.54%), Postives = 160/226 (70.80%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGRRF D   Q D  + P+K++A  AD     V  KG+  + A  +IS+ VL KM++ AE YLG  +  AV+TVPAYFND+QRQATKDAG IAGL V RIINEPTAAA+AYGLDK+   VG + + ++DLGGGTFD+S++ I+    E  FEV AT GDTHLGGEDFD+R++N+ V+EFK++   D+  +P A++RL+ A E+AK  LSS  QT + +
Sbjct:   65 TLFAIKRLIGRRFQDEEAQRDKDIMPYKIVA--ADNGDAWVEVKGQ--RVAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKE---VGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKEQGFDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNL 283          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_PELCD (Chaperone protein dnaK OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 8.538e-59
Identity = 112/222 (50.45%), Postives = 163/222 (73.42%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGR+F   +V+ D+++ PF+++        + V     +K+++  EIS+M+L KM++ AE YLG  + +AV+TVPAYFNDSQRQATKDAG I+GLNV+RIINEPTAA++AYGLDKK+    E+ + +FDLGGGTFD+S+L + +G+FEVK+T GDT LGGEDFD  ++++   EFK++   D+  +  AL+RL+ ACE+AK  LS++ +T I +
Sbjct:   65 TLFAIKRLIGRKFDSDAVRRDIQISPFEIVKADNGDAWVDVR----DKKYSPPEISAMILQKMKQTAEDYLGEKVTDAVITVPAYFNDSQRQATKDAGKISGLNVLRIINEPTAASLAYGLDKKS----EEKIAVFDLGGGTFDISILELGDGVFEVKSTNGDTFLGGEDFDQHIMDYVADEFKKEQGIDLRNDKMALQRLKEACEKAKCELSTSMETDINL 278          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_ENT38 (Chaperone protein dnaK OS=Enterobacter sp. (strain 638) GN=dnaK PE=2 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 8.538e-59
Identity = 122/226 (53.98%), Postives = 159/226 (70.35%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGRRF D  VQ D  + P+K+I   AD     ++ KG++   A  +IS+ VL KM++ AE YLG  +  AV+TVPAYFND+QRQATKDAG IAGL V RIINEPTAAA+AYGLDK+   VG + + ++DLGGGTFD+S++ I+    E  FEV AT GDTHLGGEDFD+RM+N+ V EFK+    D+  +P A++RL+ A E+AK  LSS  QT + +
Sbjct:   65 TLFAIKRLIGRRFQDEEVQRDEAIMPYKIIG--ADNGDAWIDVKGQK--MAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKE---VGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRMINYLVDEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNL 283          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_COXBU (Chaperone protein dnaK OS=Coxiella burnetii GN=dnaK PE=1 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 8.538e-59
Identity = 121/227 (53.30%), Postives = 161/227 (70.93%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYK-GEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T++  K LIGRRF D  VQ D+K+ P+K+I        + V  K G+ ++ A  +IS+ VLIKM++ AE YLG  +K+AV+TVPAYFNDSQRQATKDAG IAGLNV RIINEPTAAA+AYG+DKK    G++ + ++DLGGGTFD+S++ I     E  FEV AT GDT LGGEDFD R++++   EFK+    D+  +P AL+RL+ A E+AK  LSS+ QT + +
Sbjct:   65 TLYAIKRLIGRRFDDNVVQKDIKMVPYKIIKADNGDAWVEVKDKEGKSQKLAPPQISAQVLIKMKKTAEDYLGHEVKDAVITVPAYFNDSQRQATKDAGKIAGLNVKRIINEPTAAALAYGMDKKK---GDRKIAVYDLGGGTFDISIIEIAEVDGEHQFEVLATNGDTFLGGEDFDLRLIDYLAGEFKKDEGVDLHNDPLALQRLKEAAEKAKIELSSSQQTDVNL 288          
The following BLAST results are available for this feature:
BLAST of FC868656 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP7E_YEAST6.537e-5952.25Heat shock protein SSC3, mitochondrial OS=Saccharo... [more]
DNAK_VIBSL6.537e-5952.65Chaperone protein dnaK OS=Vibrio splendidus (strai... [more]
DNAK_SHEPA6.537e-5954.42Chaperone protein dnaK OS=Shewanella pealeana (str... [more]
DNAK_SHEHH6.537e-5954.42Chaperone protein dnaK OS=Shewanella halifaxensis ... [more]
DNAK_METSB6.537e-5953.60Chaperone protein dnaK OS=Methylocella silvestris ... [more]
DNAK_BUCBP6.537e-5952.21Chaperone protein dnaK OS=Buchnera aphidicola subs... [more]
DNAK_SERP58.538e-5953.54Chaperone protein dnaK OS=Serratia proteamaculans ... [more]
DNAK_PELCD8.538e-5950.45Chaperone protein dnaK OS=Pelobacter carbinolicus ... [more]
DNAK_ENT388.538e-5953.98Chaperone protein dnaK OS=Enterobacter sp. (strain... [more]
DNAK_COXBU8.538e-5953.30Chaperone protein dnaK OS=Coxiella burnetii GN=dna... [more]

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Properties
Property NameValue
Genbank descriptionC31003B06EF AbioticL1 Citrus clementina cDNA clone C31003B06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868656 ID=FC868656; Name=FC868656; organism=Citrus clementina; type=EST; length=710bp
ACACCGTCTTTGATGCAAAGAGCTTGATTGGTAGGAGATTCAGCGATGCA
TCAGTCCAAGGAGATATGAAGCTATGGCCATTTAAGGTGATTGCTGGACC
AGCTGACAAGCCCATGATTGGTGTTAACTACAAGGGCGAAGAGAAGCAGT
TTGCTGCTGAGGAAATCTCGTCTATGGTGCTCATCAAGATGCGTGAGATT
GCCGAGGCTTACCTTGGCTCAACTATTAAGAATGCAGTCGTTACTGTCCC
TGCTTACTTCAATGACTCACAGAGGCAGGCCACCAAGGATGCTGGTGTCA
TTGCTGGGCTTAATGTGATGCGTATCATCAATGAGCCCACTGCTGCTGCC
ATTGCTTATGGCCTTGACAAGAAGGCTACTAGTGTGGGTGAGAAGAATGT
GTTGATCTTTGATTTGGGTGGTGGTACTTTTGATGTGTCGTTGCTCACTA
TTGAGGAGGGAATCTTTGAAGTGAAGGCTACTGCTGGAGACACTCATCTT
GGTGGTGAGGATTTTGATAACAGAATGGTGAATCATTTTGTTCAGGAGTT
TAAGAGGAAGAACAAGAAGGATATTAGTGGCAACCCTAGAGCTCTTAGGA
GATTGAGGACTGCTTGTGAGAGAGCGAAGAGGACTCTCTCCTCTACTGCC
CAGACTACAATTGAGATTGATTCTTTGTATGANGGTATTGACTTTCTACT
CACCATAACT
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