FC868656

Overview
NameFC868656
Unique NameFC868656
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length710
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_COXBR (Chaperone protein dnaK OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=dnaK PE=2 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 8.538e-59
Identity = 121/227 (53.30%), Postives = 161/227 (70.93%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYK-GEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T++  K LIGRRF D  VQ D+K+ P+K+I        + V  K G+ ++ A  +IS+ VLIKM++ AE YLG  +K+AV+TVPAYFNDSQRQATKDAG IAGLNV RIINEPTAAA+AYG+DKK    G++ + ++DLGGGTFD+S++ I     E  FEV AT GDT LGGEDFD R++++   EFK+    D+  +P AL+RL+ A E+AK  LSS+ QT + +
Sbjct:   65 TLYAIKRLIGRRFDDNVVQKDIKMVPYKIIKADNGDAWVEVKDKEGKSQKLAPPQISAQVLIKMKKTAEDYLGHEVKDAVITVPAYFNDSQRQATKDAGKIAGLNVKRIINEPTAAALAYGMDKKK---GDRKIAVYDLGGGTFDISIIEIAEVDGEHQFEVLATNGDTFLGGEDFDLRLIDYLAGEFKKDEGVDLHNDPLALQRLKEAAEKAKIELSSSQQTDVNL 288          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_COXBN (Chaperone protein dnaK OS=Coxiella burnetii (strain Dugway 5J108-111) GN=dnaK PE=2 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 8.538e-59
Identity = 121/227 (53.30%), Postives = 161/227 (70.93%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYK-GEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T++  K LIGRRF D  VQ D+K+ P+K+I        + V  K G+ ++ A  +IS+ VLIKM++ AE YLG  +K+AV+TVPAYFNDSQRQATKDAG IAGLNV RIINEPTAAA+AYG+DKK    G++ + ++DLGGGTFD+S++ I     E  FEV AT GDT LGGEDFD R++++   EFK+    D+  +P AL+RL+ A E+AK  LSS+ QT + +
Sbjct:   65 TLYAIKRLIGRRFDDNVVQKDIKMVPYKIIKADNGDAWVEVKDKEGKSQKLAPPQISAQVLIKMKKTAEDYLGHEVKDAVITVPAYFNDSQRQATKDAGKIAGLNVKRIINEPTAAALAYGMDKKK---GDRKIAVYDLGGGTFDISIIEIAEVDGEHQFEVLATNGDTFLGGEDFDLRLIDYLAGEFKKDEGVDLHNDPLALQRLKEAAEKAKIELSSSQQTDVNL 288          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_COXB2 (Chaperone protein dnaK OS=Coxiella burnetii (strain CbuG_Q212) GN=dnaK PE=2 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 8.538e-59
Identity = 121/227 (53.30%), Postives = 161/227 (70.93%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYK-GEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T++  K LIGRRF D  VQ D+K+ P+K+I        + V  K G+ ++ A  +IS+ VLIKM++ AE YLG  +K+AV+TVPAYFNDSQRQATKDAG IAGLNV RIINEPTAAA+AYG+DKK    G++ + ++DLGGGTFD+S++ I     E  FEV AT GDT LGGEDFD R++++   EFK+    D+  +P AL+RL+ A E+AK  LSS+ QT + +
Sbjct:   65 TLYAIKRLIGRRFDDNVVQKDIKMVPYKIIKADNGDAWVEVKDKEGKSQKLAPPQISAQVLIKMKKTAEDYLGHEVKDAVITVPAYFNDSQRQATKDAGKIAGLNVKRIINEPTAAALAYGMDKKK---GDRKIAVYDLGGGTFDISIIEIAEVDGEHQFEVLATNGDTFLGGEDFDLRLIDYLAGEFKKDEGVDLHNDPLALQRLKEAAEKAKIELSSSQQTDVNL 288          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_COXB1 (Chaperone protein dnaK OS=Coxiella burnetii (strain CbuK_Q154) GN=dnaK PE=2 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 8.538e-59
Identity = 121/227 (53.30%), Postives = 161/227 (70.93%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYK-GEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T++  K LIGRRF D  VQ D+K+ P+K+I        + V  K G+ ++ A  +IS+ VLIKM++ AE YLG  +K+AV+TVPAYFNDSQRQATKDAG IAGLNV RIINEPTAAA+AYG+DKK    G++ + ++DLGGGTFD+S++ I     E  FEV AT GDT LGGEDFD R++++   EFK+    D+  +P AL+RL+ A E+AK  LSS+ QT + +
Sbjct:   65 TLYAIKRLIGRRFDDNVVQKDIKMVPYKIIKADNGDAWVEVKDKEGKSQKLAPPQISAQVLIKMKKTAEDYLGHEVKDAVITVPAYFNDSQRQATKDAGKIAGLNVKRIINEPTAAALAYGMDKKK---GDRKIAVYDLGGGTFDISIIEIAEVDGEHQFEVLATNGDTFLGGEDFDLRLIDYLAGEFKKDEGVDLHNDPLALQRLKEAAEKAKIELSSSQQTDVNL 288          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_WOLWR (Chaperone protein dnaK OS=Wolbachia sp. subsp. Drosophila simulans (strain wRi) GN=dnaK PE=2 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.115e-58
Identity = 116/222 (52.25%), Postives = 158/222 (71.17%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T F  K LIGR++SD  ++      P+KV A  +    +      + K+++  +I + +L  M+E AEAYLG  +K+AV+TVPAYFNDSQRQATKDAG IAGLNV+RI+NEPTAAA+AYGLDKK        ++++DLGGGTFDVS+L I +G+FEVKAT GDTHLGGEDFDN +V++ + EFK+ N  D+  +P A++R++ A E+AK  LSS  +T I +
Sbjct:   65 TFFATKRLIGRQYSDPEMKNLSV--PYKVFAAKSGDAWVKTT---DNKEYSPSQIGAFILQNMKEAAEAYLGEEVKDAVITVPAYFNDSQRQATKDAGKIAGLNVLRIVNEPTAAALAYGLDKK----HGHTIVVYDLGGGTFDVSILEIGDGVFEVKATNGDTHLGGEDFDNGVVSYLLDEFKKSNGIDLKNDPMAMQRIKEAAEKAKIELSSAMETEINL 277          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_WOLPM (Chaperone protein dnaK OS=Wolbachia pipientis wMel GN=dnaK PE=2 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.115e-58
Identity = 116/222 (52.25%), Postives = 158/222 (71.17%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T F  K LIGR++SD  ++      P+KV A  +    +      + K+++  +I + +L  M+E AEAYLG  +K+AV+TVPAYFNDSQRQATKDAG IAGLNV+RI+NEPTAAA+AYGLDKK        ++++DLGGGTFDVS+L I +G+FEVKAT GDTHLGGEDFDN +V++ + EFK+ N  D+  +P A++R++ A E+AK  LSS  +T I +
Sbjct:   65 TFFATKRLIGRQYSDPEMKNLSV--PYKVFAAKSGDAWVKTT---DNKEYSPSQIGAFILQNMKEAAEAYLGEEVKDAVITVPAYFNDSQRQATKDAGKIAGLNVLRIVNEPTAAALAYGLDKK----HGHTIVVYDLGGGTFDVSILEIGDGVFEVKATNGDTHLGGEDFDNGVVSYLLDEFKKSNGIDLKNDPMAMQRIKEAAEKAKIELSSAMETEINL 277          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_RICPR (Chaperone protein dnaK OS=Rickettsia prowazekii GN=dnaK PE=2 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.115e-58
Identity = 112/222 (50.45%), Postives = 159/222 (71.62%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T++  K LIGR F+D  V+ D  L P+ ++        +    + +  +++  +IS+ +L KM+E AE YLG  +  AV+TVPAYFND+QRQATKDAG IAGL V+RIINEPTAAA+AYG +K ++    K + ++DLGGGTFDVS+L I +G+FEVK+T GDT LGGEDFD R++NH ++ FK+++  D+S +P AL+RL+ A E+AK+ LSST+ T I +
Sbjct:   64 TIYAVKRLIGRNFTDPMVRKDQGLVPYNIVKADNGDAWV----EADNHKYSPSQISAFILQKMKETAENYLGEKVTQAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGFEKSSS----KTIAVYDLGGGTFDVSILEISDGVFEVKSTNGDTFLGGEDFDTRILNHLIEVFKKESGIDLSKDPLALQRLKEAAEKAKKELSSTSTTDINL 277          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_EDWI9 (Chaperone protein dnaK OS=Edwardsiella ictaluri (strain 93-146) GN=dnaK PE=2 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.115e-58
Identity = 117/226 (51.77%), Postives = 160/226 (70.80%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGRRF DA  Q D  + P+K++A       + V    ++++ A  +IS+ VL KM++ AE +LG T+  AV+TVPAYFND+QRQATKDAG IAGL+V RIINEPTAAA+AYG+DK    VG + + ++DLGGGTFD+S++ I+    E  FEV AT GDTHLGGEDFD+R++N+ V EFK++   D+  +P A++RL+ A E+AK  LSS  QT + +
Sbjct:   65 TLFAIKRLIGRRFEDAEAQRDKDIMPYKIVAADNGDAWVEV----KDQKIAPPQISAEVLKKMKKTAEDFLGETVTEAVITVPAYFNDAQRQATKDAGRIAGLDVKRIINEPTAAALAYGMDK---GVGNRTIAVYDLGGGTFDISIIEIDDVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVDEFKKEQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNL 283          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: HSP7M_SCHPO (Heat shock 70 kDa protein, mitochondrial OS=Schizosaccharomyces pombe GN=ssp1 PE=2 SV=2)

HSP 1 Score: 226.098 bits (575), Expect = 1.456e-58
Identity = 116/222 (52.25%), Postives = 153/222 (68.92%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T F  K LIGRRF +  VQ D+K  P+K++        +    +   K ++  +I   +L KMRE A  YLG  +KNAVVTVPAYFNDSQRQATK AG IAGLNV+R++NEPTAAA+AYGLDKK  ++    V +FDLGGGTFD+S+L +  G+FEV++T GDTHLGGEDFD  +V H V+ FK+    D+S +  A++R+R A E+AK  LSS ++T I +
Sbjct:  113 TFFATKRLIGRRFKEPEVQRDIKEVPYKIVEHSNGDAWL----EARGKTYSPSQIGGFILSKMRETASTYLGKDVKNAVVTVPAYFNDSQRQATKAAGAIAGLNVLRVVNEPTAAALAYGLDKKNDAI----VAVFDLGGGTFDISILELNNGVFEVRSTNGDTHLGGEDFDVALVRHIVETFKKNEGLDLSKDRLAVQRIREAAEKAKCELSSLSKTDISL 326          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_SALTY (Chaperone protein dnaK OS=Salmonella typhimurium GN=dnaK PE=2 SV=2)

HSP 1 Score: 226.098 bits (575), Expect = 1.456e-58
Identity = 121/226 (53.54%), Postives = 159/226 (70.35%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGRRF D  VQ D+ + P+K+I   AD     ++ KG++   A  +IS+ VL KM++ AE YLG  +  AV+TVPAYFND+QRQATKDAG IAGL V RIINEPTAAA+AYGLDK+   VG + + ++DLGGGTFD+S++ I+    E  FEV AT GDTHLGGEDFD R++N+ V EFK+    D+  +P A++RL+ A E+AK  LSS  QT + +
Sbjct:   65 TLFAIKRLIGRRFQDEEVQRDVSIMPYKIIG--ADNGDAWLDVKGQK--MAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKE---VGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDTRLINYLVDEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNL 283          
The following BLAST results are available for this feature:
BLAST of FC868656 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_COXBR8.538e-5953.30Chaperone protein dnaK OS=Coxiella burnetii (strai... [more]
DNAK_COXBN8.538e-5953.30Chaperone protein dnaK OS=Coxiella burnetii (strai... [more]
DNAK_COXB28.538e-5953.30Chaperone protein dnaK OS=Coxiella burnetii (strai... [more]
DNAK_COXB18.538e-5953.30Chaperone protein dnaK OS=Coxiella burnetii (strai... [more]
DNAK_WOLWR1.115e-5852.25Chaperone protein dnaK OS=Wolbachia sp. subsp. Dro... [more]
DNAK_WOLPM1.115e-5852.25Chaperone protein dnaK OS=Wolbachia pipientis wMel... [more]
DNAK_RICPR1.115e-5850.45Chaperone protein dnaK OS=Rickettsia prowazekii GN... [more]
DNAK_EDWI91.115e-5851.77Chaperone protein dnaK OS=Edwardsiella ictaluri (s... [more]
HSP7M_SCHPO1.456e-5852.25Heat shock 70 kDa protein, mitochondrial OS=Schizo... [more]
DNAK_SALTY1.456e-5853.54Chaperone protein dnaK OS=Salmonella typhimurium G... [more]

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Properties
Property NameValue
Genbank descriptionC31003B06EF AbioticL1 Citrus clementina cDNA clone C31003B06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868656 ID=FC868656; Name=FC868656; organism=Citrus clementina; type=EST; length=710bp
ACACCGTCTTTGATGCAAAGAGCTTGATTGGTAGGAGATTCAGCGATGCA
TCAGTCCAAGGAGATATGAAGCTATGGCCATTTAAGGTGATTGCTGGACC
AGCTGACAAGCCCATGATTGGTGTTAACTACAAGGGCGAAGAGAAGCAGT
TTGCTGCTGAGGAAATCTCGTCTATGGTGCTCATCAAGATGCGTGAGATT
GCCGAGGCTTACCTTGGCTCAACTATTAAGAATGCAGTCGTTACTGTCCC
TGCTTACTTCAATGACTCACAGAGGCAGGCCACCAAGGATGCTGGTGTCA
TTGCTGGGCTTAATGTGATGCGTATCATCAATGAGCCCACTGCTGCTGCC
ATTGCTTATGGCCTTGACAAGAAGGCTACTAGTGTGGGTGAGAAGAATGT
GTTGATCTTTGATTTGGGTGGTGGTACTTTTGATGTGTCGTTGCTCACTA
TTGAGGAGGGAATCTTTGAAGTGAAGGCTACTGCTGGAGACACTCATCTT
GGTGGTGAGGATTTTGATAACAGAATGGTGAATCATTTTGTTCAGGAGTT
TAAGAGGAAGAACAAGAAGGATATTAGTGGCAACCCTAGAGCTCTTAGGA
GATTGAGGACTGCTTGTGAGAGAGCGAAGAGGACTCTCTCCTCTACTGCC
CAGACTACAATTGAGATTGATTCTTTGTATGANGGTATTGACTTTCTACT
CACCATAACT
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