FC868656

Overview
NameFC868656
Unique NameFC868656
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length710
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_SALDC (Chaperone protein dnaK OS=Salmonella dublin (strain CT_02021853) GN=dnaK PE=2 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.456e-58
Identity = 121/226 (53.54%), Postives = 159/226 (70.35%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGRRF D  VQ D+ + P+K+I   AD     ++ KG++   A  +IS+ VL KM++ AE YLG  +  AV+TVPAYFND+QRQATKDAG IAGL V RIINEPTAAA+AYGLDK+   VG + + ++DLGGGTFD+S++ I+    E  FEV AT GDTHLGGEDFD R++N+ V EFK+    D+  +P A++RL+ A E+AK  LSS  QT + +
Sbjct:   65 TLFAIKRLIGRRFQDEEVQRDVSIMPYKIIG--ADNGDAWLDVKGQK--MAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKE---VGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDTRLINYLVDEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNL 283          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_SALCH (Chaperone protein dnaK OS=Salmonella choleraesuis GN=dnaK PE=2 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.456e-58
Identity = 121/226 (53.54%), Postives = 159/226 (70.35%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGRRF D  VQ D+ + P+K+I   AD     ++ KG++   A  +IS+ VL KM++ AE YLG  +  AV+TVPAYFND+QRQATKDAG IAGL V RIINEPTAAA+AYGLDK+   VG + + ++DLGGGTFD+S++ I+    E  FEV AT GDTHLGGEDFD R++N+ V EFK+    D+  +P A++RL+ A E+AK  LSS  QT + +
Sbjct:   65 TLFAIKRLIGRRFQDEEVQRDVSIMPYKIIG--ADNGDAWLDVKGQK--MAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKE---VGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDTRLINYLVDEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNL 283          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_SALA4 (Chaperone protein dnaK OS=Salmonella agona (strain SL483) GN=dnaK PE=2 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.456e-58
Identity = 121/226 (53.54%), Postives = 159/226 (70.35%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGRRF D  VQ D+ + P+K+I   AD     ++ KG++   A  +IS+ VL KM++ AE YLG  +  AV+TVPAYFND+QRQATKDAG IAGL V RIINEPTAAA+AYGLDK+   VG + + ++DLGGGTFD+S++ I+    E  FEV AT GDTHLGGEDFD R++N+ V EFK+    D+  +P A++RL+ A E+AK  LSS  QT + +
Sbjct:   65 TLFAIKRLIGRRFQDEEVQRDVSIMPYKIIG--ADNGDAWLDVKGQK--MAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKE---VGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDTRLINYLVDEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNL 283          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_PASMU (Chaperone protein dnaK OS=Pasteurella multocida GN=dnaK PE=2 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.456e-58
Identity = 121/226 (53.54%), Postives = 159/226 (70.35%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGRRF D  VQ D+ + PF+++A       +GV  KGE+   A  +IS+ VL KM++ AE +LG  +  AV+TVPAYFND+QRQATKDAG IAGL V RIINEPTAAA+AYGLDK     G K + ++DLGGGTFD+S++ I+    E  FEV +T GDTHLGGEDFDNR++N+ V EFK++   D+  +P A++RL+ A E+AK  LSS  QT + +
Sbjct:   65 TLFAIKRLIGRRFQDEEVQRDVSIMPFEIVAADNGDAWVGV--KGEK--MAPPQISAEVLKKMKKTAEDFLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDK---GQGNKTIAVYDLGGGTFDLSIIEIDEVGGEKTFEVLSTNGDTHLGGEDFDNRVINYLVDEFKKEQGVDLRNDPLAMQRLKEAGEKAKIELSSAQQTDVNL 283          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_PARL1 (Chaperone protein dnaK OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=dnaK PE=2 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.456e-58
Identity = 114/222 (51.35%), Postives = 158/222 (71.17%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGR + D + Q D  + P+ ++  P     +    +   ++++  +IS+ +L KM+E AE+YLG  ++ AV+TVPAYFND+QRQATKDAG IAGL V+RIINEPTAAA+AYGLDKK   +    + ++DLGGGTFDVS+L I +G+FEVK+T GDT LGGEDFD R+VN+   EFK++N  D+ G+  AL+RL+ A E+AK  LSS +QT + +
Sbjct:   65 TLFAIKRLIGRSYDDPTTQKDKGMVPYDIVKAPNGDAWV----EAHGEKYSPSQISAFILQKMKETAESYLGEKVEKAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKKEGEL----IAVYDLGGGTFDVSILEIGDGVFEVKSTNGDTFLGGEDFDMRLVNYLADEFKKENGIDLRGDKLALQRLKEAAEKAKIELSSASQTEVNL 278          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_GEOSF (Chaperone protein dnaK OS=Geobacter sp. (strain FRC-32) GN=dnaK PE=2 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.456e-58
Identity = 118/222 (53.15%), Postives = 161/222 (72.52%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGR+F   +V+ D+ + PFK++   AD     V  +G++  ++  EIS+MVL KM++ AE YLG T+ +AV+TVPAYF+DSQRQATKDAG IAGLNV+RIINEPTAAA+AYGLDKK     ++ + +FDLGGGTFD+S+L + EG+FEVK+T GDT LGGEDFD  +++    EFK+    D+  +  AL+RL+ A E+AK  LSS+ +T I +
Sbjct:   65 TLFAIKRLIGRKFESEAVKKDIAISPFKIVK--ADNADAWVEVRGQK--YSPPEISAMVLQKMKKTAEDYLGETVTDAVITVPAYFDDSQRQATKDAGKIAGLNVLRIINEPTAAALAYGLDKKK----DEKIAVFDLGGGTFDISILELGEGVFEVKSTNGDTFLGGEDFDQNVIDWIADEFKKDQGIDLRNDKMALQRLKEAAEKAKCELSSSMETDINL 278          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_ENTS8 (Chaperone protein dnaK OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=dnaK PE=2 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.456e-58
Identity = 120/226 (53.10%), Postives = 161/226 (71.24%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGRRF D  VQ D+ + P+K+I+  AD     ++ KG++   A  +IS+ VL KM++ AE YLG  +  AV+TVPAYFND+QRQATKDAG IAGL V RIINEPTAAA+AYGLDK+    G + + ++DLGGGTFD+S++ I+    E  FEV AT GDTHLGGEDFD+R++N+ V+EFK+    D+  +P A++RL+ A E+AK  LSS  QT + +
Sbjct:   65 TLFAIKRLIGRRFQDEEVQRDVSIMPYKIIS--ADNGDAWLDVKGQK--MAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKE---TGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNL 283          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_AKKM8 (Chaperone protein dnaK OS=Akkermansia muciniphila (strain ATCC BAA-835) GN=dnaK PE=2 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.456e-58
Identity = 116/222 (52.25%), Postives = 162/222 (72.97%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            TVF +K LIGR++S+ + + D K+ P++++  P     I V+  GE+K F+ +EI+SMVL K++  AE+ LG TI  AV+TVPAYFND+QR ATK AG IAGL V RIINEPTAAA+AYGLDKK+     +N+ ++DLGGGTFD+S+L I +G+FEVKA+ GDTHLGG+D+DN ++N  + EFK+ +  D+S  P A++R++   E+AK  LSST    I +
Sbjct:   65 TVFSSKRLIGRKYSELTEE-DKKV-PYEIVEAPNGDAYIRVDVGGEKKTFSPQEIASMVLAKLKADAESKLGETITEAVITVPAYFNDAQRNATKAAGEIAGLKVRRIINEPTAAALAYGLDKKS----NENIAVYDLGGGTFDISVLEIGDGVFEVKASDGDTHLGGDDWDNAIINWIIGEFKKDSGMDLSNQPDAIQRIKEEAEKAKIALSSTQSYDISL 280          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_ACTSZ (Chaperone protein dnaK OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=dnaK PE=2 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.456e-58
Identity = 122/226 (53.98%), Postives = 161/226 (71.24%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGRRF D  VQ D+ + PFK+I   AD     V+ KG++   A  ++S+ VL KM++ AE +LG T+  AV+TVPAYFND+QRQATKDAG IAGL+V RIINEPTAAA+AYGLDK     G + + ++DLGGGTFD+S++ I+    E  FEV AT GDTHLGGEDFDNR++N+ V EFK++   D+  +P A++RL+ A E+AK  LSS  QT + +
Sbjct:   65 TLFAIKRLIGRRFEDNEVQRDVDIMPFKIIR--ADNGDAWVDVKGDK--LAPPQVSAEVLKKMKKTAEDFLGETVTEAVITVPAYFNDAQRQATKDAGRIAGLDVKRIINEPTAAALAYGLDK---GKGNQTIAVYDLGGGTFDLSIIEIDEVGGEKTFEVLATNGDTHLGGEDFDNRVINYLVDEFKKEQGVDLRNDPLAMQRLKEAGEKAKIELSSAQQTDVNL 283          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK2_COLP3 (Chaperone protein dnaK 2 OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=dnaK2 PE=2 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.456e-58
Identity = 121/226 (53.54%), Postives = 159/226 (70.35%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T++  K LIGRRF D   Q D+ + PF ++   AD     V  KGE+   A  ++S+ VL KM++ AE +LG T+  AV+TVPAYFNDSQRQATKDAG IAGL V RIINEPTAAA+AYG+DK+    G+K V ++DLGGGTFD+S++ I+    E  FEV AT GDTHLGGEDFDNR++N+ V EFK+    D++ +P A++RL+ A E+AK  LSS  QT + +
Sbjct:   65 TLYAIKRLIGRRFEDKETQRDIDIMPFGIVK--ADNGDAWVQVKGEK--IAPPQVSAEVLKKMKKTAEDFLGETVTEAVITVPAYFNDSQRQATKDAGRIAGLEVKRIINEPTAAALAYGMDKQE---GDKVVAVYDLGGGTFDISIIEIDEMDGEHTFEVLATNGDTHLGGEDFDNRLINYLVAEFKKDQGMDLTSDPLAMQRLKEAAEKAKCELSSAQQTDVNL 283          
The following BLAST results are available for this feature:
BLAST of FC868656 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_SALDC1.456e-5853.54Chaperone protein dnaK OS=Salmonella dublin (strai... [more]
DNAK_SALCH1.456e-5853.54Chaperone protein dnaK OS=Salmonella choleraesuis ... [more]
DNAK_SALA41.456e-5853.54Chaperone protein dnaK OS=Salmonella agona (strain... [more]
DNAK_PASMU1.456e-5853.54Chaperone protein dnaK OS=Pasteurella multocida GN... [more]
DNAK_PARL11.456e-5851.35Chaperone protein dnaK OS=Parvibaculum lavamentivo... [more]
DNAK_GEOSF1.456e-5853.15Chaperone protein dnaK OS=Geobacter sp. (strain FR... [more]
DNAK_ENTS81.456e-5853.10Chaperone protein dnaK OS=Enterobacter sakazakii (... [more]
DNAK_AKKM81.456e-5852.25Chaperone protein dnaK OS=Akkermansia muciniphila ... [more]
DNAK_ACTSZ1.456e-5853.98Chaperone protein dnaK OS=Actinobacillus succinoge... [more]
DNAK2_COLP31.456e-5853.54Chaperone protein dnaK 2 OS=Colwellia psychrerythr... [more]

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Properties
Property NameValue
Genbank descriptionC31003B06EF AbioticL1 Citrus clementina cDNA clone C31003B06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868656 ID=FC868656; Name=FC868656; organism=Citrus clementina; type=EST; length=710bp
ACACCGTCTTTGATGCAAAGAGCTTGATTGGTAGGAGATTCAGCGATGCA
TCAGTCCAAGGAGATATGAAGCTATGGCCATTTAAGGTGATTGCTGGACC
AGCTGACAAGCCCATGATTGGTGTTAACTACAAGGGCGAAGAGAAGCAGT
TTGCTGCTGAGGAAATCTCGTCTATGGTGCTCATCAAGATGCGTGAGATT
GCCGAGGCTTACCTTGGCTCAACTATTAAGAATGCAGTCGTTACTGTCCC
TGCTTACTTCAATGACTCACAGAGGCAGGCCACCAAGGATGCTGGTGTCA
TTGCTGGGCTTAATGTGATGCGTATCATCAATGAGCCCACTGCTGCTGCC
ATTGCTTATGGCCTTGACAAGAAGGCTACTAGTGTGGGTGAGAAGAATGT
GTTGATCTTTGATTTGGGTGGTGGTACTTTTGATGTGTCGTTGCTCACTA
TTGAGGAGGGAATCTTTGAAGTGAAGGCTACTGCTGGAGACACTCATCTT
GGTGGTGAGGATTTTGATAACAGAATGGTGAATCATTTTGTTCAGGAGTT
TAAGAGGAAGAACAAGAAGGATATTAGTGGCAACCCTAGAGCTCTTAGGA
GATTGAGGACTGCTTGTGAGAGAGCGAAGAGGACTCTCTCCTCTACTGCC
CAGACTACAATTGAGATTGATTCTTTGTATGANGGTATTGACTTTCTACT
CACCATAACT
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