FC868656

Overview
NameFC868656
Unique NameFC868656
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length710
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_YERPY (Chaperone protein dnaK OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=dnaK PE=2 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 1.902e-58
Identity = 121/226 (53.54%), Postives = 159/226 (70.35%), Query Frame = 3 
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGRRF D   Q D  + P+K+IA  AD     +  KG++   A  +IS+ VL KM++ AE YLG  +  AV+TVPAYFND+QRQATKDAG IAGL V RIINEPTAAA+AYGLDK+   VG + + ++DLGGGTFD+S++ I+    E  FEV AT GDTHLGGEDFD+R++N+ V+EFK+    D+  +P A++RL+ A E+AK  LSS  QT + +
Sbjct:   65 TLFAIKRLIGRRFQDEEAQRDKDIMPYKIIA--ADNGDAWLEVKGQK--MAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKE---VGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGMDLRTDPLAMQRLKEAAEKAKIELSSAQQTDVNL 283
[Close]
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_YERPS (Chaperone protein dnaK OS=Yersinia pseudotuberculosis GN=dnaK PE=2 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 1.902e-58
Identity = 121/226 (53.54%), Postives = 159/226 (70.35%), Query Frame = 3 
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGRRF D   Q D  + P+K+IA  AD     +  KG++   A  +IS+ VL KM++ AE YLG  +  AV+TVPAYFND+QRQATKDAG IAGL V RIINEPTAAA+AYGLDK+   VG + + ++DLGGGTFD+S++ I+    E  FEV AT GDTHLGGEDFD+R++N+ V+EFK+    D+  +P A++RL+ A E+AK  LSS  QT + +
Sbjct:   65 TLFAIKRLIGRRFQDEEAQRDKDIMPYKIIA--ADNGDAWLEVKGQK--MAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKE---VGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGMDLRTDPLAMQRLKEAAEKAKIELSSAQQTDVNL 283
[Close]
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_YERPP (Chaperone protein dnaK OS=Yersinia pestis (strain Pestoides F) GN=dnaK PE=2 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 1.902e-58
Identity = 121/226 (53.54%), Postives = 159/226 (70.35%), Query Frame = 3 
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGRRF D   Q D  + P+K+IA  AD     +  KG++   A  +IS+ VL KM++ AE YLG  +  AV+TVPAYFND+QRQATKDAG IAGL V RIINEPTAAA+AYGLDK+   VG + + ++DLGGGTFD+S++ I+    E  FEV AT GDTHLGGEDFD+R++N+ V+EFK+    D+  +P A++RL+ A E+AK  LSS  QT + +
Sbjct:   65 TLFAIKRLIGRRFQDEEAQRDKDIMPYKIIA--ADNGDAWLEVKGQK--MAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKE---VGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGMDLRTDPLAMQRLKEAAEKAKIELSSAQQTDVNL 283
[Close]
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_YERPN (Chaperone protein dnaK OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=dnaK PE=2 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 1.902e-58
Identity = 121/226 (53.54%), Postives = 159/226 (70.35%), Query Frame = 3 
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGRRF D   Q D  + P+K+IA  AD     +  KG++   A  +IS+ VL KM++ AE YLG  +  AV+TVPAYFND+QRQATKDAG IAGL V RIINEPTAAA+AYGLDK+   VG + + ++DLGGGTFD+S++ I+    E  FEV AT GDTHLGGEDFD+R++N+ V+EFK+    D+  +P A++RL+ A E+AK  LSS  QT + +
Sbjct:   65 TLFAIKRLIGRRFQDEEAQRDKDIMPYKIIA--ADNGDAWLEVKGQK--MAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKE---VGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGMDLRTDPLAMQRLKEAAEKAKIELSSAQQTDVNL 283
[Close]
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_YERPG (Chaperone protein dnaK OS=Yersinia pestis bv. Antiqua (strain Angola) GN=dnaK PE=2 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 1.902e-58
Identity = 121/226 (53.54%), Postives = 159/226 (70.35%), Query Frame = 3 
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGRRF D   Q D  + P+K+IA  AD     +  KG++   A  +IS+ VL KM++ AE YLG  +  AV+TVPAYFND+QRQATKDAG IAGL V RIINEPTAAA+AYGLDK+   VG + + ++DLGGGTFD+S++ I+    E  FEV AT GDTHLGGEDFD+R++N+ V+EFK+    D+  +P A++RL+ A E+AK  LSS  QT + +
Sbjct:   65 TLFAIKRLIGRRFQDEEAQRDKDIMPYKIIA--ADNGDAWLEVKGQK--MAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKE---VGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGMDLRTDPLAMQRLKEAAEKAKIELSSAQQTDVNL 283
[Close]
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_YERPE (Chaperone protein dnaK OS=Yersinia pestis GN=dnaK PE=2 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 1.902e-58
Identity = 121/226 (53.54%), Postives = 159/226 (70.35%), Query Frame = 3 
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGRRF D   Q D  + P+K+IA  AD     +  KG++   A  +IS+ VL KM++ AE YLG  +  AV+TVPAYFND+QRQATKDAG IAGL V RIINEPTAAA+AYGLDK+   VG + + ++DLGGGTFD+S++ I+    E  FEV AT GDTHLGGEDFD+R++N+ V+EFK+    D+  +P A++RL+ A E+AK  LSS  QT + +
Sbjct:   65 TLFAIKRLIGRRFQDEEAQRDKDIMPYKIIA--ADNGDAWLEVKGQK--MAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKE---VGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGMDLRTDPLAMQRLKEAAEKAKIELSSAQQTDVNL 283
[Close]
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_YERPB (Chaperone protein dnaK OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=dnaK PE=2 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 1.902e-58
Identity = 121/226 (53.54%), Postives = 159/226 (70.35%), Query Frame = 3 
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGRRF D   Q D  + P+K+IA  AD     +  KG++   A  +IS+ VL KM++ AE YLG  +  AV+TVPAYFND+QRQATKDAG IAGL V RIINEPTAAA+AYGLDK+   VG + + ++DLGGGTFD+S++ I+    E  FEV AT GDTHLGGEDFD+R++N+ V+EFK+    D+  +P A++RL+ A E+AK  LSS  QT + +
Sbjct:   65 TLFAIKRLIGRRFQDEEAQRDKDIMPYKIIA--ADNGDAWLEVKGQK--MAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKE---VGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGMDLRTDPLAMQRLKEAAEKAKIELSSAQQTDVNL 283
[Close]
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_YERPA (Chaperone protein dnaK OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=dnaK PE=2 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 1.902e-58
Identity = 121/226 (53.54%), Postives = 159/226 (70.35%), Query Frame = 3 
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGRRF D   Q D  + P+K+IA  AD     +  KG++   A  +IS+ VL KM++ AE YLG  +  AV+TVPAYFND+QRQATKDAG IAGL V RIINEPTAAA+AYGLDK+   VG + + ++DLGGGTFD+S++ I+    E  FEV AT GDTHLGGEDFD+R++N+ V+EFK+    D+  +P A++RL+ A E+AK  LSS  QT + +
Sbjct:   65 TLFAIKRLIGRRFQDEEAQRDKDIMPYKIIA--ADNGDAWLEVKGQK--MAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKE---VGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGMDLRTDPLAMQRLKEAAEKAKIELSSAQQTDVNL 283
[Close]
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_YERP3 (Chaperone protein dnaK OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=dnaK PE=2 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 1.902e-58
Identity = 121/226 (53.54%), Postives = 159/226 (70.35%), Query Frame = 3 
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGRRF D   Q D  + P+K+IA  AD     +  KG++   A  +IS+ VL KM++ AE YLG  +  AV+TVPAYFND+QRQATKDAG IAGL V RIINEPTAAA+AYGLDK+   VG + + ++DLGGGTFD+S++ I+    E  FEV AT GDTHLGGEDFD+R++N+ V+EFK+    D+  +P A++RL+ A E+AK  LSS  QT + +
Sbjct:   65 TLFAIKRLIGRRFQDEEAQRDKDIMPYKIIA--ADNGDAWLEVKGQK--MAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKE---VGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGMDLRTDPLAMQRLKEAAEKAKIELSSAQQTDVNL 283
[Close]
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_YERE8 (Chaperone protein dnaK OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=dnaK PE=2 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 1.902e-58
Identity = 121/226 (53.54%), Postives = 159/226 (70.35%), Query Frame = 3 
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGRRF D   Q D  + P+K+IA  AD     +  KG++   A  +IS+ VL KM++ AE YLG  +  AV+TVPAYFND+QRQATKDAG IAGL V RIINEPTAAA+AYGLDK+   VG + + ++DLGGGTFD+S++ I+    E  FEV AT GDTHLGGEDFD+R++N+ V+EFK+    D+  +P A++RL+ A E+AK  LSS  QT + +
Sbjct:   65 TLFAIKRLIGRRFQDEEAQRDKDIMPYKIIA--ADNGDAWLEVKGQK--IAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKE---VGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGMDLRTDPLAMQRLKEAAEKAKIELSSAQQTDVNL 283
The following BLAST results are available for this feature:
BLAST of FC868656 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_YERPY1.902e-5853.54Chaperone protein dnaK OS=Yersinia pseudotuberculo... [more]
DNAK_YERPS1.902e-5853.54Chaperone protein dnaK OS=Yersinia pseudotuberculo... [more]
DNAK_YERPP1.902e-5853.54Chaperone protein dnaK OS=Yersinia pestis (strain ... [more]
DNAK_YERPN1.902e-5853.54Chaperone protein dnaK OS=Yersinia pestis bv. Anti... [more]
DNAK_YERPG1.902e-5853.54Chaperone protein dnaK OS=Yersinia pestis bv. Anti... [more]
DNAK_YERPE1.902e-5853.54Chaperone protein dnaK OS=Yersinia pestis GN=dnaK ... [more]
DNAK_YERPB1.902e-5853.54Chaperone protein dnaK OS=Yersinia pseudotuberculo... [more]
DNAK_YERPA1.902e-5853.54Chaperone protein dnaK OS=Yersinia pestis bv. Anti... [more]
DNAK_YERP31.902e-5853.54Chaperone protein dnaK OS=Yersinia pseudotuberculo... [more]
DNAK_YERE81.902e-5853.54Chaperone protein dnaK OS=Yersinia enterocolitica ... [more]

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Properties
Property NameValue
Genbank descriptionC31003B06EF AbioticL1 Citrus clementina cDNA clone C31003B06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868656 ID=FC868656; Name=FC868656; organism=Citrus clementina; type=EST; length=710bp
ACACCGTCTTTGATGCAAAGAGCTTGATTGGTAGGAGATTCAGCGATGCA
TCAGTCCAAGGAGATATGAAGCTATGGCCATTTAAGGTGATTGCTGGACC
AGCTGACAAGCCCATGATTGGTGTTAACTACAAGGGCGAAGAGAAGCAGT
TTGCTGCTGAGGAAATCTCGTCTATGGTGCTCATCAAGATGCGTGAGATT
GCCGAGGCTTACCTTGGCTCAACTATTAAGAATGCAGTCGTTACTGTCCC
TGCTTACTTCAATGACTCACAGAGGCAGGCCACCAAGGATGCTGGTGTCA
TTGCTGGGCTTAATGTGATGCGTATCATCAATGAGCCCACTGCTGCTGCC
ATTGCTTATGGCCTTGACAAGAAGGCTACTAGTGTGGGTGAGAAGAATGT
GTTGATCTTTGATTTGGGTGGTGGTACTTTTGATGTGTCGTTGCTCACTA
TTGAGGAGGGAATCTTTGAAGTGAAGGCTACTGCTGGAGACACTCATCTT
GGTGGTGAGGATTTTGATAACAGAATGGTGAATCATTTTGTTCAGGAGTT
TAAGAGGAAGAACAAGAAGGATATTAGTGGCAACCCTAGAGCTCTTAGGA
GATTGAGGACTGCTTGTGAGAGAGCGAAGAGGACTCTCTCCTCTACTGCC
CAGACTACAATTGAGATTGATTCTTTGTATGANGGTATTGACTTTCTACT
CACCATAACT
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