FC868656

Overview
NameFC868656
Unique NameFC868656
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length710
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_THERP (Chaperone protein dnaK OS=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) GN=dnaK PE=2 SV=2)

HSP 1 Score: 225.713 bits (574), Expect = 1.902e-58
Identity = 117/222 (52.70%), Postives = 157/222 (70.72%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T++  K  +GRRF D  VQ  +KL P++V          GV  K  ++ +  +EIS+M+L K+++ AEAYLG T+  AV+TVPAYF+DSQR ATKDAG IAGL V+RIINEPTA+A+AYGLDKK    GE+ V ++DLGGGT+D+S+L I EG+F+V AT GDTHLGG+DFD R+++    EFKR+   D+  +  AL+RL+ A E+AK  LSS  QT I +
Sbjct:   65 TIYSIKRFMGRRFDDPEVQRTIKLVPYQVRRAQNG----GVEVKMGDRWYTPQEISAMILQKLKQDAEAYLGETVDKAVITVPAYFDDSQRNATKDAGRIAGLEVLRIINEPTASALAYGLDKK----GEEKVAVYDLGGGTYDISILDISEGVFQVLATNGDTHLGGDDFDQRIIDWLCDEFKRETGIDLRQDRMALQRLKEAAEKAKIELSSVQQTEINL 278          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_SINMW (Chaperone protein dnaK OS=Sinorhizobium medicae (strain WSM419) GN=dnaK PE=2 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 1.902e-58
Identity = 115/222 (51.80%), Postives = 157/222 (70.72%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGR F D + Q D  + P+K++        +    +  +K ++  +IS+M+L KM+E AE+YLG  ++ AV+TVPAYFND+QRQATKDAG IAGL+V+RIINEPTAAA+AYGLDKK      K + ++DLGGGTFD+S+L I +G+FEVK+T GDT LGGEDFD R+V +   EFK++   D+  +  AL+RL+ A E+AK  LSS+ QT I +
Sbjct:   65 TLFAIKRLIGRTFEDPTTQKDKGMVPYKIVKADNGDAWV----EAHDKSYSPSQISAMILQKMKETAESYLGEKVEKAVITVPAYFNDAQRQATKDAGKIAGLDVLRIINEPTAAALAYGLDKKE----GKTIAVYDLGGGTFDISVLEIGDGVFEVKSTNGDTFLGGEDFDMRLVEYLASEFKKEQGIDLKNDKLALQRLKEAAEKAKIELSSSQQTEINL 278          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_SALAR (Chaperone protein dnaK OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=dnaK PE=2 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 1.902e-58
Identity = 121/226 (53.54%), Postives = 159/226 (70.35%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGRRF D  VQ D+ + P+K+I   AD     ++ KG++   A  +IS+ VL KM++ AE YLG  +  AV+TVPAYFND+QRQATKDAG IAGL V RIINEPTAAA+AYGLDK+   VG + + ++DLGGGTFD+S++ I+    E  FEV AT GDTHLGGEDFD R++N+ V EFK+    D+  +P A++RL+ A E+AK  LSS  QT + +
Sbjct:   65 TLFAIKRLIGRRFQDEEVQRDVSIMPYKIIE--ADNGDAWLDVKGQK--MAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKE---VGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDTRLINYLVDEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNL 283          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_RICPU (Chaperone protein dnaK OS=Rickettsia peacockii (strain Rustic) GN=dnaK PE=2 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 1.902e-58
Identity = 112/222 (50.45%), Postives = 155/222 (69.82%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T++  K LIGR F D  V+ D  + P+ ++        +    + +  +++  +IS+ +L KM+E AE YLG  +  AV+TVPAYFND+QRQATKDAG IAGL V+RIINEPTAAA+AYG +K A+    K + ++DLGGGTFDVS+L I +G+FEVK+T GDT LGGEDFD R++NH +  FK++N  D+S +P AL+RL+ A E+AK+ LSS   T I +
Sbjct:   64 TIYAVKRLIGRNFIDPMVKKDQGIVPYNIVKADNGDAWV----EADNNKYSPSQISAFILQKMKETAENYLGDKVTQAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGFEKSAS----KTIAVYDLGGGTFDVSILEIADGVFEVKSTNGDTFLGGEDFDTRILNHLIDVFKKENGIDLSNDPLALQRLKEAAEKAKKELSSAVTTNINL 277          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_KLEP7 (Chaperone protein dnaK OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=dnaK PE=2 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 1.902e-58
Identity = 121/226 (53.54%), Postives = 159/226 (70.35%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGRRF D  VQ D+ + P+K++A  AD     ++ KG +   A  +IS+ VL KM++ AE YLG  +  AV+TVPAYFND+QRQATKDAG IAGL V RIINEPTAAA+AYGLDK+   VG + + ++DLGGGTFD+S++ I+    E  FEV AT GDTHLGGEDFD R++N+ V EFK+    D+  +P A++RL+ A E+AK  LSS  QT + +
Sbjct:   65 TLFAIKRLIGRRFQDEEVQRDVSIMPYKIVA--ADNGDAWLDVKGTKT--APPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKE---VGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDTRLINYLVDEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNL 283          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_KLEP3 (Chaperone protein dnaK OS=Klebsiella pneumoniae (strain 342) GN=dnaK PE=2 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 1.902e-58
Identity = 121/226 (53.54%), Postives = 159/226 (70.35%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGRRF D  VQ D+ + P+K++A  AD     ++ KG +   A  +IS+ VL KM++ AE YLG  +  AV+TVPAYFND+QRQATKDAG IAGL V RIINEPTAAA+AYGLDK+   VG + + ++DLGGGTFD+S++ I+    E  FEV AT GDTHLGGEDFD R++N+ V EFK+    D+  +P A++RL+ A E+AK  LSS  QT + +
Sbjct:   65 TLFAIKRLIGRRFQDEEVQRDVSIMPYKIVA--ADNGDAWLDVKGTKT--APPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKE---VGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDTRLINYLVDEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNL 283          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_IDILO (Chaperone protein dnaK OS=Idiomarina loihiensis GN=dnaK PE=2 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 1.902e-58
Identity = 119/226 (52.65%), Postives = 162/226 (71.68%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGRRF D  VQ D+ + P+K++   AD     V   G++K  A  +IS+ VL KM++ AE +LG  + +AV+TVPAYFND+QRQATKDAG IAGLNV RIINEPTAAA+AYG+DKK+   G+  + ++DLGGGTFD+S++ I+    E  FEV AT GDTHLGGEDFDNR++N+ V++F++    D+  +P A++RL+ A E+AK  LSS  QT + +
Sbjct:   65 TLFAIKRLIGRRFQDEEVQRDIGIMPYKIVK--ADNGDAWVEIDGDKK--APPQISAEVLKKMKKTAEEFLGEKVTDAVITVPAYFNDAQRQATKDAGKIAGLNVKRIINEPTAAALAYGMDKKS---GDNVIAVYDLGGGTFDISIIEIDEVEGEHTFEVLATNGDTHLGGEDFDNRLINYLVEQFQKDQGMDLRKDPLAMQRLKEAAEKAKIELSSAQQTEVNL 283          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_BEII9 (Chaperone protein dnaK OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=dnaK PE=2 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 1.902e-58
Identity = 117/222 (52.70%), Postives = 153/222 (68.92%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T F  K LIGR F D   + D+ L P+K+   P     +    + + K ++  +IS+ +L KM+E AE+YLG  +  AV+TVPAYFND+QRQATKDAG IAGL V+RIINEPTAAA+AYGLDKK    G   + ++DLGGGTFDVS+L I +G+FEVK+T GDT LGGEDFD R+V +   EFK++N  D+  +  AL+RL+ A E+AK  LSS  QT I +
Sbjct:   65 TFFAIKRLIGRTFEDPMTKKDIGLVPYKITKAPNGDAWV----EADGKPYSPSQISAFILQKMKETAESYLGQPVSQAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKK----GSGTIAVYDLGGGTFDVSILEIGDGVFEVKSTNGDTFLGGEDFDTRLVEYLADEFKKENGIDLKKDKLALQRLKEAAEKAKIELSSATQTEINL 278          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_BAUCH (Chaperone protein dnaK OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=dnaK PE=2 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 1.902e-58
Identity = 118/226 (52.21%), Postives = 161/226 (71.24%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGRRF D  VQ D+ + P+K+IA  AD     +  KG++   A  ++S+ +L KM++ AE YLG ++  AV+TVPAYFND+QRQATKDAG IAGL V RIINEPTAAA+AYGLDK+   +G + + ++DLGGGTFD+S++ I+    E  FEV AT GDTHLGGEDFD+R++N+ V EFK+    D+  +P A++RL+ A E+AK  LS+  QT + +
Sbjct:   65 TLFAIKRLIGRRFEDEEVQRDVDIMPYKIIA--ADNGDAWLEIKGQK--IAPPQVSAEILKKMKKTAEDYLGESVTEAVITVPAYFNDTQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKE---IGNRTIAVYDLGGGTFDISIIEIDDVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVDEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSAAQQTDVNL 283          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_ROSDO (Chaperone protein dnaK OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=dnaK PE=2 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 2.484e-58
Identity = 120/220 (54.55%), Postives = 160/220 (72.73%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTI 662
            T+F  K LIGRR  DA++  D K  PF VI G        V  KGE+  ++  +IS+ +L KM+E AE+YLG  +  AV+TVPAYFND+QRQATKDAG IAGL V+RIINEPTAAA+AYGLDK+ T    + + ++DLGGGTFDV++L I++G+FEVK+T GDT LGGEDFD R+VN+    FK+++  D++ +  AL+RL+ A E+AK  LSS++QT I
Sbjct:   64 TIFGVKRLIGRRNDDAALAKDKKNLPFAVIDGGNGDAW--VEAKGEK--YSPSQISAFILGKMKETAESYLGEDVTQAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKEQT----QTIAVYDLGGGTFDVTILEIDDGLFEVKSTNGDTFLGGEDFDMRIVNYLADTFKKEHSVDLTQDKMALQRLKEAAEKAKIELSSSSQTEI 275          
The following BLAST results are available for this feature:
BLAST of FC868656 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_THERP1.902e-5852.70Chaperone protein dnaK OS=Thermomicrobium roseum (... [more]
DNAK_SINMW1.902e-5851.80Chaperone protein dnaK OS=Sinorhizobium medicae (s... [more]
DNAK_SALAR1.902e-5853.54Chaperone protein dnaK OS=Salmonella arizonae (str... [more]
DNAK_RICPU1.902e-5850.45Chaperone protein dnaK OS=Rickettsia peacockii (st... [more]
DNAK_KLEP71.902e-5853.54Chaperone protein dnaK OS=Klebsiella pneumoniae su... [more]
DNAK_KLEP31.902e-5853.54Chaperone protein dnaK OS=Klebsiella pneumoniae (s... [more]
DNAK_IDILO1.902e-5852.65Chaperone protein dnaK OS=Idiomarina loihiensis GN... [more]
DNAK_BEII91.902e-5852.70Chaperone protein dnaK OS=Beijerinckia indica subs... [more]
DNAK_BAUCH1.902e-5852.21Chaperone protein dnaK OS=Baumannia cicadellinicol... [more]
DNAK_ROSDO2.484e-5854.55Chaperone protein dnaK OS=Roseobacter denitrifican... [more]

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Properties
Property NameValue
Genbank descriptionC31003B06EF AbioticL1 Citrus clementina cDNA clone C31003B06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868656 ID=FC868656; Name=FC868656; organism=Citrus clementina; type=EST; length=710bp
ACACCGTCTTTGATGCAAAGAGCTTGATTGGTAGGAGATTCAGCGATGCA
TCAGTCCAAGGAGATATGAAGCTATGGCCATTTAAGGTGATTGCTGGACC
AGCTGACAAGCCCATGATTGGTGTTAACTACAAGGGCGAAGAGAAGCAGT
TTGCTGCTGAGGAAATCTCGTCTATGGTGCTCATCAAGATGCGTGAGATT
GCCGAGGCTTACCTTGGCTCAACTATTAAGAATGCAGTCGTTACTGTCCC
TGCTTACTTCAATGACTCACAGAGGCAGGCCACCAAGGATGCTGGTGTCA
TTGCTGGGCTTAATGTGATGCGTATCATCAATGAGCCCACTGCTGCTGCC
ATTGCTTATGGCCTTGACAAGAAGGCTACTAGTGTGGGTGAGAAGAATGT
GTTGATCTTTGATTTGGGTGGTGGTACTTTTGATGTGTCGTTGCTCACTA
TTGAGGAGGGAATCTTTGAAGTGAAGGCTACTGCTGGAGACACTCATCTT
GGTGGTGAGGATTTTGATAACAGAATGGTGAATCATTTTGTTCAGGAGTT
TAAGAGGAAGAACAAGAAGGATATTAGTGGCAACCCTAGAGCTCTTAGGA
GATTGAGGACTGCTTGTGAGAGAGCGAAGAGGACTCTCTCCTCTACTGCC
CAGACTACAATTGAGATTGATTCTTTGTATGANGGTATTGACTTTCTACT
CACCATAACT
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