FC868656

Overview
NameFC868656
Unique NameFC868656
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length710
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_SODGM (Chaperone protein dnaK OS=Sodalis glossinidius (strain morsitans) GN=dnaK PE=2 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 4.237e-58
Identity = 118/226 (52.21%), Postives = 160/226 (70.80%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGRR+ D  VQ D+ + P+K++A  AD     +  KG++   A  +IS+ +L KM++ AE YLG  +  AV+TVPAYFND+QRQATKDAG IAGL+V RIINEPTAAA+AYGLDK+    G + + ++DLGGGTFD+S++ I+    E  FEV AT GDTHLGGEDFD+R++N+ V EFK+    D+  +P A++RL+ A E+AK  LSS  QT + +
Sbjct:   65 TLFAIKRLIGRRYQDEEVQRDVSIMPYKIVA--ADNGDAWLEVKGQK--MAPPQISAEILKKMKKTAEDYLGEPVTEAVITVPAYFNDTQRQATKDAGRIAGLDVKRIINEPTAAALAYGLDKE---TGNRTIAVYDLGGGTFDISIIEIDDVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVDEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNL 283          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_SHESA (Chaperone protein dnaK OS=Shewanella sp. (strain ANA-3) GN=dnaK PE=2 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 4.237e-58
Identity = 121/226 (53.54%), Postives = 158/226 (69.91%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T F  K LIGRRF D  VQ D+ + PFK+IA  AD     V  +G +   A  ++S+ +L KM++ AE +LG  +  AV+TVPAYFNDSQRQATKDAG IAGL V RIINEPTAAA+AYG+DKK    G+  V ++DLGGGTFD+S++ I+    +  FEV AT GDTHLGGEDFDNR++N+   EFK++   D+  +P A++RL+ A E+AK  LSST QT + +
Sbjct:   64 TFFAIKRLIGRRFKDDEVQRDVNIMPFKIIA--ADNGDAWVESRGNK--MAPPQVSAEILKKMKKTAEDFLGEEVTEAVITVPAYFNDSQRQATKDAGRIAGLEVKRIINEPTAAALAYGIDKKQ---GDNIVAVYDLGGGTFDISIIEIDSNDGDQTFEVLATNGDTHLGGEDFDNRLINYLADEFKKEQGLDLRKDPLAMQRLKEAAEKAKIELSSTNQTEVNL 282          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_SHEON (Chaperone protein dnaK OS=Shewanella oneidensis GN=dnaK PE=2 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 4.237e-58
Identity = 121/226 (53.54%), Postives = 158/226 (69.91%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T F  K LIGRRF D  VQ D+ + PFK+IA  AD     V  +G +   A  ++S+ +L KM++ AE +LG  +  AV+TVPAYFNDSQRQATKDAG IAGL V RIINEPTAAA+AYG+DKK    G+  V ++DLGGGTFD+S++ I+    +  FEV AT GDTHLGGEDFDNR++N+   EFK++   D+  +P A++RL+ A E+AK  LSST QT + +
Sbjct:   64 TFFAIKRLIGRRFKDDEVQRDVNIMPFKIIA--ADNGDAWVESRGNK--MAPPQVSAEILKKMKKTAEDFLGEEVTEAVITVPAYFNDSQRQATKDAGRIAGLEVKRIINEPTAAALAYGIDKKQ---GDNIVAVYDLGGGTFDISIIEIDSNDGDQTFEVLATNGDTHLGGEDFDNRLINYLADEFKKEQGLDLRKDPLAMQRLKEAAEKAKIELSSTNQTEVNL 282          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_RICCN (Chaperone protein dnaK OS=Rickettsia conorii GN=dnaK PE=2 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 4.237e-58
Identity = 112/222 (50.45%), Postives = 155/222 (69.82%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T++  K LIGR F D  V+ D  + P+ ++        +    + +  +++  +IS+ +L KM+E AE YLG  +  AV+TVPAYFND+QRQATKDAG IAGL V+RIINEPTAAA+AYG +K A+    K + ++DLGGGTFDVS+L I +G+FEVK+T GDT LGGEDFD R++NH +  FK++N  D+S +P AL+RL+ A E+AK+ LSS   T I +
Sbjct:   64 TIYAVKRLIGRNFIDPMVRKDQGIVPYNIVKADNGDAWV----EADNNKYSPSQISAFILQKMKETAENYLGDKVTQAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGFEKSAS----KTIAVYDLGGGTFDVSILEIADGVFEVKSTNGDTFLGGEDFDTRILNHLIDVFKKENGIDLSKDPLALQRLKEAAEKAKKELSSAVTTDINL 277          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_RICAE (Chaperone protein dnaK OS=Rickettsia africae (strain ESF-5) GN=dnaK PE=2 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 4.237e-58
Identity = 112/222 (50.45%), Postives = 155/222 (69.82%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T++  K LIGR F D  V+ D  + P+ ++        +    + +  +++  +IS+ +L KM+E AE YLG  +  AV+TVPAYFND+QRQATKDAG IAGL V+RIINEPTAAA+AYG +K A+    K + ++DLGGGTFDVS+L I +G+FEVK+T GDT LGGEDFD R++NH +  FK++N  D+S +P AL+RL+ A E+AK+ LSS   T I +
Sbjct:   64 TIYAVKRLIGRNFIDPMVRKDQGIVPYNIVKADNGDAWV----EADNNKYSPSQISAFILQKMKETAENYLGDKVTQAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGFEKSAS----KTIAVYDLGGGTFDVSILEIADGVFEVKSTNGDTFLGGEDFDTRILNHLIDVFKKENGIDLSKDPLALQRLKEAAEKAKKELSSAVTTDINL 277          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_GEOLS (Chaperone protein dnaK OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=dnaK PE=2 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 4.237e-58
Identity = 114/222 (51.35%), Postives = 160/222 (72.07%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGR+F   +V+ D+ + PFK++        + V     +K+++  EIS+++L KM++ AE YLG T+ +AV+TVPAYF+DSQRQATKDAG IAGLNV+RIINEPTAAA+AYGLDKK     ++ + +FDLGGGTFDVS+L + +G+FEVK+T GDT LGGEDFD ++++    EFK+    D+ G+  AL+RL+ A E+AK  LS + +T I +
Sbjct:   65 TLFAIKRLIGRKFETEAVKKDIAISPFKIVKADNGDAWVDVR----DKKYSPPEISAIILQKMKKTAEDYLGETVTDAVITVPAYFDDSQRQATKDAGKIAGLNVLRIINEPTAAALAYGLDKKK----DEKIAVFDLGGGTFDVSVLELGDGVFEVKSTNGDTFLGGEDFDQKIIDWIADEFKKDQGIDLRGDKMALQRLKEAAEKAKCELSGSMETDINL 278          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: HSP7E_DROME (Heat shock 70 kDa protein cognate 5 OS=Drosophila melanogaster GN=Hsc70-5 PE=1 SV=2)

HSP 1 Score: 224.172 bits (570), Expect = 5.534e-58
Identity = 118/225 (52.44%), Postives = 158/225 (70.22%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSL 677
            T +  K LIGRRF D  V+ D+    +KV+        +      + K ++  +I + +L+KM+E AEAYL + +KNAVVTVPAYFNDSQRQATKDAG IAGLNV+R+INEPTAAA+AYG+DK      +K + ++DLGGGTFD+S+L I++G+FEVK+T GDT LGGEDFDN +VN  V EFK+ +  DI  +  A++RL+ A E+AK  LSS+ QT I +  L
Sbjct:  115 TFYATKRLIGRRFDDPEVKKDITNLSYKVVKASNGDAWVSST---DGKVYSPSQIGAFILMKMKETAEAYLNTPVKNAVVTVPAYFNDSQRQATKDAGQIAGLNVLRVINEPTAAALAYGMDK----TEDKIIAVYDLGGGTFDISILEIQKGVFEVKSTNGDTLLGGEDFDNHIVNFLVAEFKKDSGIDIRKDNIAMQRLKEAAEKAKCELSSSQQTDINLPYL 332          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_VIBHA (Chaperone protein dnaK OS=Vibrio harveyi GN=dnaK PE=2 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 5.534e-58
Identity = 118/226 (52.21%), Postives = 162/226 (71.68%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGRRF D  VQ D+++ P+K++   AD     V  KG++   AA ++S+ VL KM++ AE +LG  +  AV+TVPAYFND+Q QATKDAG IAGL V RIINEPTAAA+AYGLDK   S G++ + ++DLGGGTFD+S++ I+    E  FEV AT GDTHLGGEDFDNR++N+ V EF ++   ++  +P A++R++ A E+AK  LSST+QT + +
Sbjct:   66 TLFAIKRLIGRRFEDEEVQRDIEIMPYKIVK--ADNGDAWVEAKGQK--MAAPQVSAEVLKKMKKTAEDFLGEEVTGAVITVPAYFNDAQAQATKDAGRIAGLEVKRIINEPTAAALAYGLDK---SGGDRTIAVYDLGGGTFDISIIEIDEVEGEKTFEVLATNGDTHLGGEDFDNRLINYLVDEFNKEQGINLKNDPLAMQRVKEAAEKAKIELSSTSQTDVNL 284          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_SHESH (Chaperone protein dnaK OS=Shewanella sediminis (strain HAW-EB3) GN=dnaK PE=2 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 5.534e-58
Identity = 121/226 (53.54%), Postives = 156/226 (69.03%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T F  K LIGRRF D  VQ D+ + PFK+I   AD     V   G  K+ A  ++S+  L KM++ AE +LG  +  AV+TVPAYFNDSQRQATKDAG IAGL V RIINEPTAAA+AYG+DKK    G+  V ++DLGGGTFD+S++ I+    E  FEV AT GDTHLGGEDFDNR++N+   EFK++   D+  +P A++RL+ A E+AK  LSS +QT + +
Sbjct:   64 TFFAIKRLIGRRFKDDEVQRDVDIMPFKIIG--ADNGDAWVEAHG--KKMAPPQVSAETLKKMKKTAEDFLGEEVTEAVITVPAYFNDSQRQATKDAGRIAGLEVKRIINEPTAAALAYGIDKKQ---GDNIVAVYDLGGGTFDISIIEIDSVDGEQTFEVLATNGDTHLGGEDFDNRLINYLADEFKKEQSLDLRNDPLAMQRLKEAAEKAKIELSSASQTEVNL 282          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_RICBR (Chaperone protein dnaK OS=Rickettsia bellii (strain RML369-C) GN=dnaK PE=2 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 5.534e-58
Identity = 114/222 (51.35%), Postives = 155/222 (69.82%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            TV+  K LIGR F+D  V+ D ++ P+ ++        + V    E K+ +  +IS+ +L KM+E AE YLG  +  AV+TVPAYFND+QRQATKDAG IAGL V+RIINEPTAAA+AYG DK A+    K + ++DLGGGTFDVS+L I +G+FEVK+T GDT LGGEDFD R++ H +  FK+++  D+  +P AL+RL+ A E+AK+ LSS   T I +
Sbjct:   64 TVYAVKRLIGRNFTDPMVKKDQEIVPYNIVKADNGDAWVEV----EGKKHSPSQISAFILQKMKETAENYLGEKVTQAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGFDKSAS----KTIAVYDLGGGTFDVSILEIGDGVFEVKSTNGDTFLGGEDFDTRILEHLINTFKKESGIDLRNDPLALQRLKEAAEKAKKELSSALTTDINL 277          
The following BLAST results are available for this feature:
BLAST of FC868656 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_SODGM4.237e-5852.21Chaperone protein dnaK OS=Sodalis glossinidius (st... [more]
DNAK_SHESA4.237e-5853.54Chaperone protein dnaK OS=Shewanella sp. (strain A... [more]
DNAK_SHEON4.237e-5853.54Chaperone protein dnaK OS=Shewanella oneidensis GN... [more]
DNAK_RICCN4.237e-5850.45Chaperone protein dnaK OS=Rickettsia conorii GN=dn... [more]
DNAK_RICAE4.237e-5850.45Chaperone protein dnaK OS=Rickettsia africae (stra... [more]
DNAK_GEOLS4.237e-5851.35Chaperone protein dnaK OS=Geobacter lovleyi (strai... [more]
HSP7E_DROME5.534e-5852.44Heat shock 70 kDa protein cognate 5 OS=Drosophila ... [more]
DNAK_VIBHA5.534e-5852.21Chaperone protein dnaK OS=Vibrio harveyi GN=dnaK P... [more]
DNAK_SHESH5.534e-5853.54Chaperone protein dnaK OS=Shewanella sediminis (st... [more]
DNAK_RICBR5.534e-5851.35Chaperone protein dnaK OS=Rickettsia bellii (strai... [more]

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Properties
Property NameValue
Genbank descriptionC31003B06EF AbioticL1 Citrus clementina cDNA clone C31003B06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868656 ID=FC868656; Name=FC868656; organism=Citrus clementina; type=EST; length=710bp
ACACCGTCTTTGATGCAAAGAGCTTGATTGGTAGGAGATTCAGCGATGCA
TCAGTCCAAGGAGATATGAAGCTATGGCCATTTAAGGTGATTGCTGGACC
AGCTGACAAGCCCATGATTGGTGTTAACTACAAGGGCGAAGAGAAGCAGT
TTGCTGCTGAGGAAATCTCGTCTATGGTGCTCATCAAGATGCGTGAGATT
GCCGAGGCTTACCTTGGCTCAACTATTAAGAATGCAGTCGTTACTGTCCC
TGCTTACTTCAATGACTCACAGAGGCAGGCCACCAAGGATGCTGGTGTCA
TTGCTGGGCTTAATGTGATGCGTATCATCAATGAGCCCACTGCTGCTGCC
ATTGCTTATGGCCTTGACAAGAAGGCTACTAGTGTGGGTGAGAAGAATGT
GTTGATCTTTGATTTGGGTGGTGGTACTTTTGATGTGTCGTTGCTCACTA
TTGAGGAGGGAATCTTTGAAGTGAAGGCTACTGCTGGAGACACTCATCTT
GGTGGTGAGGATTTTGATAACAGAATGGTGAATCATTTTGTTCAGGAGTT
TAAGAGGAAGAACAAGAAGGATATTAGTGGCAACCCTAGAGCTCTTAGGA
GATTGAGGACTGCTTGTGAGAGAGCGAAGAGGACTCTCTCCTCTACTGCC
CAGACTACAATTGAGATTGATTCTTTGTATGANGGTATTGACTTTCTACT
CACCATAACT
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