FC868656

Overview
NameFC868656
Unique NameFC868656
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length710
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_PELUB (Chaperone protein dnaK OS=Pelagibacter ubique GN=dnaK PE=2 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 5.534e-58
Identity = 116/222 (52.25%), Postives = 159/222 (71.62%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGR F D +V+ D+   PFK++   ++K    +  KGE+  ++  +IS+ +L KM+E AE YLG  +  AV+TVPAYFND+QRQATKDAG IAGL V+RIINEPTAA++AYGLDKK      K + ++DLGGGTFDVS+L + +G+FEVK+T GDT LGGEDFDN +V++ + EFK+ +  D+  +  AL+RL+ A E+AK  LSS  QT + +
Sbjct:   65 TIFAVKRLIGRSFEDPTVKKDIAAAPFKIVN--SEKGDAWIEAKGEK--YSPSQISAFILQKMKETAEKYLGQEVTKAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAASLAYGLDKKQ----NKKIAVYDLGGGTFDVSILELGDGVFEVKSTNGDTFLGGEDFDNTIVDYLIGEFKKDSGIDLRSDKLALQRLKEAAEKAKIELSSAEQTDVNL 278          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_HAES2 (Chaperone protein dnaK OS=Haemophilus somnus (strain 2336) GN=dnaK PE=2 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 5.534e-58
Identity = 122/226 (53.98%), Postives = 159/226 (70.35%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGRRF D  VQ D+ + PF++    AD     V+ KGE+   A  +IS+ VL KM++ AE +LG T+  AV+TVPAYFND+QRQATKDAG IAGL V RIINEPTAAA+AYGLDK     G + + ++DLGGGTFD+S++ I+    E  FEV AT GDTHLGGEDFDNR++N+ V EFK++   D+  +P A++RL+ A E+AK  LSS  QT + +
Sbjct:   65 TLFAIKRLIGRRFEDQEVQRDVAIMPFEITK--ADNGDAWVSVKGEK--MAPPQISAEVLKKMKKTAEDFLGETVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDK---GKGNQTIAVYDLGGGTFDLSIIEIDEVGGEKTFEVLATNGDTHLGGEDFDNRVINYLVDEFKKEQGVDLRNDPLAMQRLKEAGEKAKIELSSAQQTDVNL 283          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_HAES1 (Chaperone protein dnaK OS=Haemophilus somnus (strain 129Pt) GN=dnaK PE=2 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 5.534e-58
Identity = 122/226 (53.98%), Postives = 159/226 (70.35%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGRRF D  VQ D+ + PF++    AD     V+ KGE+   A  +IS+ VL KM++ AE +LG T+  AV+TVPAYFND+QRQATKDAG IAGL V RIINEPTAAA+AYGLDK     G + + ++DLGGGTFD+S++ I+    E  FEV AT GDTHLGGEDFDNR++N+ V EFK++   D+  +P A++RL+ A E+AK  LSS  QT + +
Sbjct:   65 TLFAIKRLIGRRFEDQEVQRDVAIMPFEITK--ADNGDAWVSVKGEK--MAPPQISAEVLKKMKKTAEDFLGETVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDK---GKGNQTIAVYDLGGGTFDLSIIEIDEVGGEKTFEVLATNGDTHLGGEDFDNRVINYLVDEFKKEQGVDLRNDPLAMQRLKEAGEKAKIELSSAQQTDVNL 283          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_GRABC (Chaperone protein dnaK OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 5.534e-58
Identity = 119/222 (53.60%), Postives = 158/222 (71.17%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T++  K LIGRR+ D +V  D  L P+ ++ G  D     V  +GE+  +A  +IS+ VL KM+E AEAYLG  +  AV+TVPAYFNDSQRQATKDAG IAGL V+RIINEPTAAA+AYG+DKK T      + ++DLGGGTFDVS+L I +G+FEVK+T GDT LGGEDFD R++++   EF+R+   D+  +  AL+RL+ A E+AK  LSS+ +T I +
Sbjct:   65 TLYAVKRLIGRRYDDPTVAKDKDLVPYAIVRG--DNGDAWVEARGEK--YAPSQISAFVLSKMKETAEAYLGEPVTQAVITVPAYFNDSQRQATKDAGRIAGLEVLRIINEPTAAALAYGMDKKNTG----TIAVYDLGGGTFDVSILEIGDGVFEVKSTNGDTFLGGEDFDARVIDYLASEFQREQGIDLRKDKLALQRLKEAAEKAKIELSSSKETEINL 278          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_AGGAC (Chaperone protein dnaK OS=Aggregatibacter actinomycetemcomitans GN=dnaK PE=2 SV=3)

HSP 1 Score: 224.172 bits (570), Expect = 5.534e-58
Identity = 122/226 (53.98%), Postives = 157/226 (69.47%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGRRF D  V+ D+ + PF +    AD     V  KGE+   A  +IS+ VL KM++ AE YLG  +  AV+TVPAYFND+QRQATKDAG IAGL+V RIINEPTAAA+AYGLDK     G K + ++DLGGGTFD+S++ I+    E  FEV AT GDTHLGGEDFDNR++N+ V EFK++   D+  +P A++RL+ A E+AK  LSS  QT + +
Sbjct:   65 TLFAIKRLIGRRFEDEEVKRDIDIMPFAITK--ADNGDAWVEVKGEK--LAPPQISAEVLKKMKKAAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLDVKRIINEPTAAALAYGLDK---GTGNKTIAVYDLGGGTFDLSIIEIDEVGGEKTFEVLATNGDTHLGGEDFDNRIINYLVDEFKKEQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNL 283          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_WOLPP (Chaperone protein dnaK OS=Wolbachia pipientis subsp. Culex pipiens (strain wPip) GN=dnaK PE=2 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 7.228e-58
Identity = 116/222 (52.25%), Postives = 157/222 (70.72%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T F  K LIGR++SD  ++      P+KV A       +      + K+++  +I + +L  ++E AEAYLG  +K+AV+TVPAYFNDSQRQATKDAG IAGLNV+RIINEPTAAA+AYGLDKK        ++++DLGGGTFDVS+L I +G+FEVKAT GDTHLGGEDFDN +VN+ + EFK+ N  D+  +P A++R++ A E+AK  LSS  +T + +
Sbjct:   65 TFFATKRLIGRQYSDPEMKNLGV--PYKVFAAKNGDAWVKTT---DGKEYSPSQIGAFILQNLKEAAEAYLGEEVKDAVITVPAYFNDSQRQATKDAGKIAGLNVLRIINEPTAAALAYGLDKK----HGHTIVVYDLGGGTFDVSVLEIGDGVFEVKATNGDTHLGGEDFDNAVVNYLLGEFKKSNGIDLKNDPMAMQRIKEAAEKAKVELSSAMETEVNL 277          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_THET8 (Chaperone protein dnaK OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=dnaK PE=2 SV=2)

HSP 1 Score: 223.787 bits (569), Expect = 7.228e-58
Identity = 121/222 (54.50%), Postives = 159/222 (71.62%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F+ K  IGRRF +  VQ + K  P+KV+ GP      GV  + + K +  EEIS+M+L K+ E A   LG  I  AV+TVPAYFN++QR+AT +AG IAGL V+RIINEPTAAA+AYGLDKK    G + VL+FDLGGGTFDV++L I EG+FEVKAT+GDTHLGG D D+ +VN   +EFK+++  D+  + +AL+RL  A E+AK  LSST +TTI +
Sbjct:   64 TIFEIKRFIGRRFEE--VQEEAKRVPYKVVPGPDG----GVRVEVKGKLYTPEEISAMILRKLVEDASKKLGEKITKAVITVPAYFNNAQREATANAGRIAGLEVLRIINEPTAAALAYGLDKK----GNETVLVFDLGGGTFDVTILEIGEGVFEVKATSGDTHLGGSDMDHAIVNWLAEEFKKEHGVDLKADRQALQRLIEAAEKAKIELSSTLETTISL 275          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_RICAH (Chaperone protein dnaK OS=Rickettsia akari (strain Hartford) GN=dnaK PE=2 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 7.228e-58
Identity = 111/222 (50.00%), Postives = 155/222 (69.82%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T++  K LIGR F+D  V+ D  + P+ ++        +    + +  +++  +IS+ +L KM+E AE YLG  +  AV+TVPAYFND+QRQATKDAG IAGL V+RIINEPTAAA+AYG DK A+    K + ++DLGGGTFDVS+L I +G+FEVK+T GDT LGGEDFD R++NH +  FK+++  D+  +P AL+RL+ A E+AK+ LSS   T I +
Sbjct:   64 TIYAVKRLIGRNFTDPMVKKDQDIVPYNIVKADNGDAWV----EADSNKYSPSQISAFILQKMKETAENYLGEKVTQAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGFDKAAS----KTIAVYDLGGGTFDVSILEIGDGVFEVKSTNGDTFLGGEDFDTRILNHLIDVFKKESGIDLRNDPLALQRLKEAAEKAKKELSSAVTTDINL 277          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_VESOH (Chaperone protein dnaK OS=Vesicomyosocius okutanii subsp. Calyptogena okutanii (strain HA) GN=dnaK PE=2 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 9.440e-58
Identity = 120/226 (53.10%), Postives = 159/226 (70.35%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T++  K LIGRRF + +VQ D+ L P+K++        + V    + K+ AA EIS+ V+ KM++ AE YLG  +  AV+TVPAYFNDSQRQATKDAG IAGLNV RIINEPTAAA+AYG+DK     G+K V+++DLGGGTFDVS++ +E    E  FEV +T GDT LGGEDFD RM+ + V EFK+    D++ +P AL+RL+ A E+AK  LSS+ QT + +
Sbjct:   66 TLYAIKRLIGRRFEEDAVQKDIDLVPYKIVKADNGDAWVKV----KNKKMAAPEISAKVIGKMKKTAEDYLGEEVTEAVITVPAYFNDSQRQATKDAGKIAGLNVKRIINEPTAAALAYGVDKVK---GDKTVVVYDLGGGTFDVSIIEMEDIDGEKHFEVLSTNGDTFLGGEDFDQRMIGYLVDEFKKDQGVDLTNDPMALQRLKEAAEKAKIELSSSEQTEVNL 284          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_THET2 (Chaperone protein dnaK OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=dnaK PE=2 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 9.440e-58
Identity = 121/222 (54.50%), Postives = 159/222 (71.62%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F+ K  IGRRF +  VQ + K  P+KV+ GP      GV  + + K +  EEIS+M+L K+ E A   LG  I  AV+TVPAYFN++QR+AT +AG IAGL V+RIINEPTAAA+AYGLDKK    G + VL+FDLGGGTFDV++L I EG+FEVKAT+GDTHLGG D D+ +VN   +EFK+++  D+  + +AL+RL  A E+AK  LSST +TTI +
Sbjct:   64 TIFEIKRFIGRRFEE--VQEEAKRVPYKVVPGPDG----GVRVEVKGKLYTPEEISAMILRKLVEDASKKLGEKITKAVITVPAYFNNAQREATANAGRIAGLEVLRIINEPTAAALAYGLDKK----GNETVLVFDLGGGTFDVTVLEIGEGVFEVKATSGDTHLGGSDMDHAIVNWLAEEFKKEHGVDLKADRQALQRLIEAAEKAKIELSSTLETTISL 275          
The following BLAST results are available for this feature:
BLAST of FC868656 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_PELUB5.534e-5852.25Chaperone protein dnaK OS=Pelagibacter ubique GN=d... [more]
DNAK_HAES25.534e-5853.98Chaperone protein dnaK OS=Haemophilus somnus (stra... [more]
DNAK_HAES15.534e-5853.98Chaperone protein dnaK OS=Haemophilus somnus (stra... [more]
DNAK_GRABC5.534e-5853.60Chaperone protein dnaK OS=Granulibacter bethesdens... [more]
DNAK_AGGAC5.534e-5853.98Chaperone protein dnaK OS=Aggregatibacter actinomy... [more]
DNAK_WOLPP7.228e-5852.25Chaperone protein dnaK OS=Wolbachia pipientis subs... [more]
DNAK_THET87.228e-5854.50Chaperone protein dnaK OS=Thermus thermophilus (st... [more]
DNAK_RICAH7.228e-5850.00Chaperone protein dnaK OS=Rickettsia akari (strain... [more]
DNAK_VESOH9.440e-5853.10Chaperone protein dnaK OS=Vesicomyosocius okutanii... [more]
DNAK_THET29.440e-5854.50Chaperone protein dnaK OS=Thermus thermophilus (st... [more]

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Properties
Property NameValue
Genbank descriptionC31003B06EF AbioticL1 Citrus clementina cDNA clone C31003B06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868656 ID=FC868656; Name=FC868656; organism=Citrus clementina; type=EST; length=710bp
ACACCGTCTTTGATGCAAAGAGCTTGATTGGTAGGAGATTCAGCGATGCA
TCAGTCCAAGGAGATATGAAGCTATGGCCATTTAAGGTGATTGCTGGACC
AGCTGACAAGCCCATGATTGGTGTTAACTACAAGGGCGAAGAGAAGCAGT
TTGCTGCTGAGGAAATCTCGTCTATGGTGCTCATCAAGATGCGTGAGATT
GCCGAGGCTTACCTTGGCTCAACTATTAAGAATGCAGTCGTTACTGTCCC
TGCTTACTTCAATGACTCACAGAGGCAGGCCACCAAGGATGCTGGTGTCA
TTGCTGGGCTTAATGTGATGCGTATCATCAATGAGCCCACTGCTGCTGCC
ATTGCTTATGGCCTTGACAAGAAGGCTACTAGTGTGGGTGAGAAGAATGT
GTTGATCTTTGATTTGGGTGGTGGTACTTTTGATGTGTCGTTGCTCACTA
TTGAGGAGGGAATCTTTGAAGTGAAGGCTACTGCTGGAGACACTCATCTT
GGTGGTGAGGATTTTGATAACAGAATGGTGAATCATTTTGTTCAGGAGTT
TAAGAGGAAGAACAAGAAGGATATTAGTGGCAACCCTAGAGCTCTTAGGA
GATTGAGGACTGCTTGTGAGAGAGCGAAGAGGACTCTCTCCTCTACTGCC
CAGACTACAATTGAGATTGATTCTTTGTATGANGGTATTGACTTTCTACT
CACCATAACT
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