FC868656

Overview
NameFC868656
Unique NameFC868656
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length710
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_PROMH (Chaperone protein dnaK OS=Proteus mirabilis (strain HI4320) GN=dnaK PE=2 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 9.440e-58
Identity = 118/226 (52.21%), Postives = 161/226 (71.24%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGRRF DA VQ D+ + P+K+I   AD     V  + E+   A  ++S+ VL KM++ AE YLG  +  AV+TVPAYFND+QRQATKDAG IAGL+V RIINEPTAAA+AYGLD++   VG + + ++DLGGGTFD+S++ I+    E  +EV +T GDTHLGGEDFD+R++N+ V EFK++   D+  +P A++RL+ A E+AK  LSS  QT + +
Sbjct:   65 TLFAIKRLIGRRFEDAEVQRDVSIMPYKIIK--ADNGDAWVEARNEK--MAPPQVSAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLDVKRIINEPTAAALAYGLDRE---VGNRTIAVYDLGGGTFDISIIEIDEVDGEKTYEVLSTNGDTHLGGEDFDSRLINYLVDEFKKEQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNL 283          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_BUCAT (Chaperone protein dnaK OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain Tuc7) GN=dnaK PE=2 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 9.440e-58
Identity = 117/226 (51.77%), Postives = 159/226 (70.35%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGR+F D  VQ D+K+ P+ ++        I V    ++++ A  +IS+ VL KM++ AE YLG TIK AV+TVPAYFND+QRQATKDAG IAGL V RIINEPTAAA+AYGLDK     G + + ++DLGGGTFD+S++ I+    E  FEV AT GDTHLGGEDFD+R++N+ V EFK++   D+  +P +++RL+ + E+AK  LSS  QT + +
Sbjct:   65 TLFAIKRLIGRKFKDDEVQRDIKIMPYNIVNSDNGDAWIDV----KKQKMAPPQISAEVLKKMKKTAEDYLGETIKEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDK---GKGNRTIAVYDLGGGTFDISIIEIDEVDKEKTFEVLATNGDTHLGGEDFDSRLINYLVTEFKKEQGIDLRNDPLSMQRLKESAEKAKIELSSAQQTDVNL 283          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_BUCAP (Chaperone protein dnaK OS=Buchnera aphidicola subsp. Schizaphis graminum GN=dnaK PE=2 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 9.440e-58
Identity = 119/226 (52.65%), Postives = 159/226 (70.35%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGR+F D  VQ D+K+ P+ +I        I V    ++++ A  +IS+ VL KM++ AE YLG +IK AV+TVPAYFND+QRQATKDAG IAGL V RIINEPTAAA+AYGLDK     G + + ++DLGGGTFD+S++ I+    E  FEV AT GDTHLGGEDFD+R++N+ VQEFK++   D+  +  A++RL+ A E+AK  LSS  QT + +
Sbjct:   65 TLFAIKRLIGRKFRDDEVQRDIKIMPYSIINSENGDAWIDV----KKQKMAPPQISAEVLKKMKKTAEDYLGESIKEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDK---GEGNRTIAVYDLGGGTFDISIIEIDDVDKEKTFEVLATNGDTHLGGEDFDSRLINYLVQEFKKEQGIDLRNDSLAMQRLKEAAEKAKIELSSAQQTDVNL 283          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_BUCAI (Chaperone protein dnaK OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=dnaK PE=2 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 9.440e-58
Identity = 117/226 (51.77%), Postives = 159/226 (70.35%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGR+F D  VQ D+K+ P+ ++        I V    ++++ A  +IS+ VL KM++ AE YLG TIK AV+TVPAYFND+QRQATKDAG IAGL V RIINEPTAAA+AYGLDK     G + + ++DLGGGTFD+S++ I+    E  FEV AT GDTHLGGEDFD+R++N+ V EFK++   D+  +P +++RL+ + E+AK  LSS  QT + +
Sbjct:   65 TLFAIKRLIGRKFKDDEVQRDIKIMPYNIVNSDNGDAWIDV----KKQKMAPPQISAEVLKKMKKTAEDYLGETIKEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDK---GKGNRTIAVYDLGGGTFDISIIEIDEVDKEKTFEVLATNGDTHLGGEDFDSRLINYLVTEFKKEQGIDLRNDPLSMQRLKESAEKAKIELSSAQQTDVNL 283          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_BUCA5 (Chaperone protein dnaK OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain 5A) GN=dnaK PE=2 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 9.440e-58
Identity = 117/226 (51.77%), Postives = 159/226 (70.35%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGR+F D  VQ D+K+ P+ ++        I V    ++++ A  +IS+ VL KM++ AE YLG TIK AV+TVPAYFND+QRQATKDAG IAGL V RIINEPTAAA+AYGLDK     G + + ++DLGGGTFD+S++ I+    E  FEV AT GDTHLGGEDFD+R++N+ V EFK++   D+  +P +++RL+ + E+AK  LSS  QT + +
Sbjct:   65 TLFAIKRLIGRKFKDDEVQRDIKIMPYNIVNSDNGDAWIDV----KKQKMAPPQISAEVLKKMKKTAEDYLGETIKEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDK---GKGNRTIAVYDLGGGTFDISIIEIDEVDKEKTFEVLATNGDTHLGGEDFDSRLINYLVTEFKKEQGIDLRNDPLSMQRLKESAEKAKIELSSAQQTDVNL 283          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_SHEB9 (Chaperone protein dnaK OS=Shewanella baltica (strain OS195) GN=dnaK PE=2 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.233e-57
Identity = 120/226 (53.10%), Postives = 158/226 (69.91%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T F  K LIGRRF D  VQ D+ + PFK+IA  AD     V  +G +   A  ++S+ +L KM++ AE +LG  +  AV+TVPAYFNDSQRQATKDAG IAGL+V RIINEPTAAA+AYG+DKK    G+  V ++DLGGGTFD+S++ I+    +  FEV AT GDTHLGGEDFDNR++N+   EFK++   D+  +P A++RL+ A E+AK  LSST  T + +
Sbjct:   64 TFFAIKRLIGRRFKDDEVQRDVNIMPFKIIA--ADNGDAWVESRGNK--MAPPQVSAEILKKMKKTAEDFLGEEVTEAVITVPAYFNDSQRQATKDAGRIAGLDVKRIINEPTAAALAYGIDKKQ---GDNIVAVYDLGGGTFDISIIEIDSNDGDQTFEVLATNGDTHLGGEDFDNRLINYLADEFKKEQGLDLRKDPLAMQRLKEAAEKAKIELSSTNHTEVNL 282          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_SHEB8 (Chaperone protein dnaK OS=Shewanella baltica (strain OS185) GN=dnaK PE=2 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.233e-57
Identity = 120/226 (53.10%), Postives = 158/226 (69.91%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T F  K LIGRRF D  VQ D+ + PFK+IA  AD     V  +G +   A  ++S+ +L KM++ AE +LG  +  AV+TVPAYFNDSQRQATKDAG IAGL+V RIINEPTAAA+AYG+DKK    G+  V ++DLGGGTFD+S++ I+    +  FEV AT GDTHLGGEDFDNR++N+   EFK++   D+  +P A++RL+ A E+AK  LSST  T + +
Sbjct:   64 TFFAIKRLIGRRFKDDEVQRDVNIMPFKIIA--ADNGDAWVESRGNK--MAPPQVSAEILKKMKKTAEDFLGEEVTEAVITVPAYFNDSQRQATKDAGRIAGLDVKRIINEPTAAALAYGIDKKQ---GDNIVAVYDLGGGTFDISIIEIDSNDGDQTFEVLATNGDTHLGGEDFDNRLINYLADEFKKEQGLDLRKDPLAMQRLKEAAEKAKIELSSTNHTEVNL 282          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_SHEB5 (Chaperone protein dnaK OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=dnaK PE=2 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.233e-57
Identity = 120/226 (53.10%), Postives = 158/226 (69.91%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T F  K LIGRRF D  VQ D+ + PFK+IA  AD     V  +G +   A  ++S+ +L KM++ AE +LG  +  AV+TVPAYFNDSQRQATKDAG IAGL+V RIINEPTAAA+AYG+DKK    G+  V ++DLGGGTFD+S++ I+    +  FEV AT GDTHLGGEDFDNR++N+   EFK++   D+  +P A++RL+ A E+AK  LSST  T + +
Sbjct:   64 TFFAIKRLIGRRFKDDEVQRDVNIMPFKIIA--ADNGDAWVESRGNK--MAPPQVSAEILKKMKKTAEDFLGEEVTEAVITVPAYFNDSQRQATKDAGRIAGLDVKRIINEPTAAALAYGIDKKQ---GDNIVAVYDLGGGTFDISIIEIDSNDGDQTFEVLATNGDTHLGGEDFDNRLINYLADEFKKEQGLDLRKDPLAMQRLKEAAEKAKIELSSTNHTEVNL 282          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_SHEB2 (Chaperone protein dnaK OS=Shewanella baltica (strain OS223) GN=dnaK PE=2 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.233e-57
Identity = 120/226 (53.10%), Postives = 158/226 (69.91%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T F  K LIGRRF D  VQ D+ + PFK+IA  AD     V  +G +   A  ++S+ +L KM++ AE +LG  +  AV+TVPAYFNDSQRQATKDAG IAGL+V RIINEPTAAA+AYG+DKK    G+  V ++DLGGGTFD+S++ I+    +  FEV AT GDTHLGGEDFDNR++N+   EFK++   D+  +P A++RL+ A E+AK  LSST  T + +
Sbjct:   64 TFFAIKRLIGRRFKDDEVQRDVNIMPFKIIA--ADNGDAWVESRGNK--MAPPQVSAEILKKMKKTAEDFLGEEVTEAVITVPAYFNDSQRQATKDAGRIAGLDVKRIINEPTAAALAYGIDKKQ---GDNIVAVYDLGGGTFDISIIEIDSNDGDQTFEVLATNGDTHLGGEDFDNRLINYLADEFKKEQGLDLRKDPLAMQRLKEAAEKAKIELSSTNHTEVNL 282          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_SACD2 (Chaperone protein dnaK OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=dnaK PE=2 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.233e-57
Identity = 122/226 (53.98%), Postives = 161/226 (71.24%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGR+F+D  VQ D+ + P+K+IA  AD     V  KG++K  A  +IS+ VL KM++ AE YLG T+  AV+TVPAYFNDSQRQATKDAG IAGL+V RIINEPTAAA+AYG+DK   S G+  + ++DLGGGTFD+S++ I     E  FEV +T GDT LGGEDFD R++ +  +EFK+ N  D+  +P AL+RL+ A E+AK  LSS+ QT + +
Sbjct:   65 TLFAVKRLIGRKFTDDVVQKDISMVPYKIIA--ADNGDAWVEVKGDKK--APPQISAEVLKKMKKTAEDYLGETVTEAVITVPAYFNDSQRQATKDAGKIAGLDVKRIINEPTAAALAYGMDK---SKGDSTIAVYDLGGGTFDISIIEIADVDGEHQFEVLSTNGDTFLGGEDFDLRLIEYLAEEFKKTNGIDLHNDPLALQRLKEAAEKAKIELSSSQQTEVNL 283          
The following BLAST results are available for this feature:
BLAST of FC868656 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_PROMH9.440e-5852.21Chaperone protein dnaK OS=Proteus mirabilis (strai... [more]
DNAK_BUCAT9.440e-5851.77Chaperone protein dnaK OS=Buchnera aphidicola subs... [more]
DNAK_BUCAP9.440e-5852.65Chaperone protein dnaK OS=Buchnera aphidicola subs... [more]
DNAK_BUCAI9.440e-5851.77Chaperone protein dnaK OS=Buchnera aphidicola subs... [more]
DNAK_BUCA59.440e-5851.77Chaperone protein dnaK OS=Buchnera aphidicola subs... [more]
DNAK_SHEB91.233e-5753.10Chaperone protein dnaK OS=Shewanella baltica (stra... [more]
DNAK_SHEB81.233e-5753.10Chaperone protein dnaK OS=Shewanella baltica (stra... [more]
DNAK_SHEB51.233e-5753.10Chaperone protein dnaK OS=Shewanella baltica (stra... [more]
DNAK_SHEB21.233e-5753.10Chaperone protein dnaK OS=Shewanella baltica (stra... [more]
DNAK_SACD21.233e-5753.98Chaperone protein dnaK OS=Saccharophagus degradans... [more]

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Properties
Property NameValue
Genbank descriptionC31003B06EF AbioticL1 Citrus clementina cDNA clone C31003B06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868656 ID=FC868656; Name=FC868656; organism=Citrus clementina; type=EST; length=710bp
ACACCGTCTTTGATGCAAAGAGCTTGATTGGTAGGAGATTCAGCGATGCA
TCAGTCCAAGGAGATATGAAGCTATGGCCATTTAAGGTGATTGCTGGACC
AGCTGACAAGCCCATGATTGGTGTTAACTACAAGGGCGAAGAGAAGCAGT
TTGCTGCTGAGGAAATCTCGTCTATGGTGCTCATCAAGATGCGTGAGATT
GCCGAGGCTTACCTTGGCTCAACTATTAAGAATGCAGTCGTTACTGTCCC
TGCTTACTTCAATGACTCACAGAGGCAGGCCACCAAGGATGCTGGTGTCA
TTGCTGGGCTTAATGTGATGCGTATCATCAATGAGCCCACTGCTGCTGCC
ATTGCTTATGGCCTTGACAAGAAGGCTACTAGTGTGGGTGAGAAGAATGT
GTTGATCTTTGATTTGGGTGGTGGTACTTTTGATGTGTCGTTGCTCACTA
TTGAGGAGGGAATCTTTGAAGTGAAGGCTACTGCTGGAGACACTCATCTT
GGTGGTGAGGATTTTGATAACAGAATGGTGAATCATTTTGTTCAGGAGTT
TAAGAGGAAGAACAAGAAGGATATTAGTGGCAACCCTAGAGCTCTTAGGA
GATTGAGGACTGCTTGTGAGAGAGCGAAGAGGACTCTCTCCTCTACTGCC
CAGACTACAATTGAGATTGATTCTTTGTATGANGGTATTGACTTTCTACT
CACCATAACT
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