FC868656

Overview
NameFC868656
Unique NameFC868656
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length710
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_RHIME (Chaperone protein dnaK OS=Rhizobium meliloti GN=dnaK PE=2 SV=2)

HSP 1 Score: 223.016 bits (567), Expect = 1.233e-57
Identity = 118/222 (53.15%), Postives = 157/222 (70.72%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGR F D + Q D  + P+K++   AD     V   G    ++  +IS+M+L KM+E AE+YLG  ++ AV+TVPAYFND+QRQATKDAG IAGL+V+RIINEPTAAA+AYGLDKK      K + ++DLGGGTFD+S+L I +G+FEVK+T GDT LGGEDFD R+V +   EFK++   D+  +  AL+RL+ A E+AK  LSS+ QT I +
Sbjct:   65 TLFAIKRLIGRTFEDPTTQKDKGMVPYKIVK--ADNGDAWVEAHGTS--YSPSQISAMILQKMKETAESYLGEKVEKAVITVPAYFNDAQRQATKDAGKIAGLDVLRIINEPTAAALAYGLDKKE----GKTIAVYDLGGGTFDISVLEIGDGVFEVKSTNGDTFLGGEDFDMRLVEYLASEFKKEQGIDLKNDKLALQRLKEAAEKAKIELSSSQQTEINL 278          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_PSEHT (Chaperone protein dnaK OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=dnaK PE=2 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.233e-57
Identity = 122/226 (53.98%), Postives = 157/226 (69.47%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            TVF  K LIGRRF D  VQ D+ + PFK++   AD     V   GE++  AA +IS+ +L KM++ AE +LG  +  AV+TVPAYFNDSQRQATKDAG IAGL V RIINEPTAAA+AYG+DK     GE  V ++DLGGGTFD+S++ I+    E  FEV AT GDTHLGGEDFDNR++N+ V EFK+    D+  +P A++R++ A E+AK  LSS   T + +
Sbjct:   65 TVFAIKRLIGRRFEDEEVQRDIGIMPFKIVK--ADNGDAWVEAGGEKR--AAPQISAEILKKMKKTAEDFLGEAVTEAVITVPAYFNDSQRQATKDAGRIAGLEVKRIINEPTAAALAYGMDKNR---GENIVAVYDLGGGTFDLSIIEIDEVEGEHTFEVLATNGDTHLGGEDFDNRVINYLVAEFKKDQGLDLKTDPLAMQRVKEAAEKAKIELSSAQSTEVNL 283          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_PHOLL (Chaperone protein dnaK OS=Photorhabdus luminescens subsp. laumondii GN=dnaK PE=2 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.233e-57
Identity = 116/226 (51.33%), Postives = 158/226 (69.91%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGRRF D   Q D+ + P+K+IA       + V    ++++ A  ++S+ VL KM++ AE YLG  +  AV+TVPAYFND+QRQATKDAG IAGL V RIINEPTAAA+AYGLD++   VG + + ++DLGGGTFD+S++ I+    E  +EV AT GDTHLGGEDFD+RM+N+ V EFK+    D+  +P A++RL+ A E+AK  LSS  QT + +
Sbjct:   65 TLFAIKRLIGRRFQDEEAQRDVAIMPYKIIAADNGDAWLEV----KDQKMAPPQVSAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDRE---VGNRTIAVYDLGGGTFDISIIEIDEVDGEKTYEVLATNGDTHLGGEDFDSRMINYLVDEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNL 283          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_SHESR (Chaperone protein dnaK OS=Shewanella sp. (strain MR-7) GN=dnaK PE=2 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 1.610e-57
Identity = 120/226 (53.10%), Postives = 157/226 (69.47%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T F  K LIGRRF D  VQ D+ + PFK+I   AD     V  +G +   A  ++S+ +L KM++ AE +LG  +  AV+TVPAYFNDSQRQATKDAG IAGL V RIINEPTAAA+AYG+DKK    G+  V ++DLGGGTFD+S++ I+    +  FEV AT GDTHLGGEDFDNR++N+   EFK++   D+  +P A++RL+ A E+AK  LSST QT + +
Sbjct:   64 TFFAIKRLIGRRFKDDEVQRDVNIMPFKIIQ--ADNGDAWVESRGNK--MAPPQVSAEILKKMKKTAEDFLGEEVTEAVITVPAYFNDSQRQATKDAGRIAGLEVKRIINEPTAAALAYGIDKKQ---GDNIVAVYDLGGGTFDISIIEIDSNDGDQTFEVLATNGDTHLGGEDFDNRLINYLADEFKKEQGLDLRKDPLAMQRLKEAAEKAKIELSSTNQTEVNL 282          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_SHESM (Chaperone protein dnaK OS=Shewanella sp. (strain MR-4) GN=dnaK PE=2 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 1.610e-57
Identity = 120/226 (53.10%), Postives = 157/226 (69.47%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T F  K LIGRRF D  VQ D+ + PFK+I   AD     V  +G +   A  ++S+ +L KM++ AE +LG  +  AV+TVPAYFNDSQRQATKDAG IAGL V RIINEPTAAA+AYG+DKK    G+  V ++DLGGGTFD+S++ I+    +  FEV AT GDTHLGGEDFDNR++N+   EFK++   D+  +P A++RL+ A E+AK  LSST QT + +
Sbjct:   64 TFFAIKRLIGRRFKDDEVQRDVNIMPFKIIQ--ADNGDAWVESRGNK--MAPPQVSAEILKKMKKTAEDFLGEEVTEAVITVPAYFNDSQRQATKDAGRIAGLEVKRIINEPTAAALAYGIDKKQ---GDNIVAVYDLGGGTFDISIIEIDSNDGDQTFEVLATNGDTHLGGEDFDNRLINYLADEFKKEQGLDLRKDPLAMQRLKEAAEKAKIELSSTNQTEVNL 282          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_PSEA6 (Chaperone protein dnaK OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=dnaK PE=2 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 1.610e-57
Identity = 123/226 (54.42%), Postives = 158/226 (69.91%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEG----IFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGRRF D  VQ D+ + PF +I   AD     V  K E+   A  +IS+ VL KM++ AE YLG  +  AV+TVPAYFNDSQRQATKDAG IAGL V RIINEPTAAA+AYG+DKK    G+  V ++DLGGGTFD+S++ I+E      FEV AT GDTHLGGEDFDN+++N+ V+EFK+ +  D+  +P A++RL+ A E+AK  LSS  QT + +
Sbjct:   65 TLFAIKRLIGRRFEDKEVQRDIDIMPFDIIK--ADNGDAWVQAKDEK--LAPPQISAEVLKKMKKTAEDYLGEEVTAAVITVPAYFNDSQRQATKDAGRIAGLEVKRIINEPTAAALAYGMDKKK---GDSVVAVYDLGGGTFDISIIEIDEADGEHTFEVLATNGDTHLGGEDFDNQVINYLVEEFKKDSGMDLRKDPLAMQRLKEAGEKAKIELSSAQQTEVNL 283          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_VIBHB (Chaperone protein dnaK OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=dnaK PE=2 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 2.103e-57
Identity = 116/226 (51.33%), Postives = 162/226 (71.68%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGRRF D  VQ D+++ P+K++   AD     V  +G++   AA ++S+ +L KM++ AE +LG  +  AV+TVPAYFND+QRQATKDAG IAGL V RIINEPTAAA+AYGLDK   S G++ + ++DLGGGTFD+S++ I+    E  FEV AT GDTHLGGEDFD R++N+ V EF ++   ++  +P A++R++ A E+AK  LSST+QT + +
Sbjct:   64 TLFAIKRLIGRRFEDEEVQRDIEIMPYKIVK--ADNGDAWVEAQGQK--MAAPQVSAEILKKMKKTAEDFLGEEVTGAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDK---SGGDRTIAVYDLGGGTFDISIIEIDEVEGEKTFEVLATNGDTHLGGEDFDTRLINYLVDEFNKEQGINLKNDPLAMQRVKEAAEKAKIELSSTSQTDVNL 282          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_THISH (Chaperone protein dnaK OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=dnaK PE=2 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 2.103e-57
Identity = 120/226 (53.10%), Postives = 157/226 (69.47%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGRRF +  VQ D+KL P+++         + V     +K+ A  EIS+ VL KM++ AE YLG  +  AV+TVPAYFNDSQRQATKDAG IAGL V RIINEPTAAA+AYGLDKK    G+  V ++DLGGGTFDVS++ I     E  FEV AT GDT LGGEDFD R++++ V+EFK++   D+ G+P A++RL+ + E+AK  LSS+ QT + +
Sbjct:   65 TLFAVKRLIGRRFEEPEVQKDIKLVPYEIFKADNGDAWVRVR----DKKMAPPEISARVLQKMKKTAEDYLGEPVTEAVITVPAYFNDSQRQATKDAGKIAGLEVKRIINEPTAAALAYGLDKKR---GDSKVAVYDLGGGTFDVSIIEIAEVDGEHQFEVLATNGDTFLGGEDFDMRLIDYLVEEFKKEQGIDLKGDPLAMQRLKESAEKAKIELSSSQQTDVNL 283          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_SHEDO (Chaperone protein dnaK OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=dnaK PE=2 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 2.103e-57
Identity = 120/226 (53.10%), Postives = 156/226 (69.03%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T F  K LIGRRF D  VQ D+ + PFK+I   AD     V  +G +   A  ++S+ +L KM++ AE +LG  +  AV+TVPAYFNDSQRQATKDAG IAGL V RIINEPTAAA+AYG+DKK    G+  V ++DLGGGTFD+S++ I+    +  FEV AT GDTHLGGEDFDNR++N+   EFK+    D+  +P A++RL+ A E+AK  LSST QT + +
Sbjct:   64 TFFAIKRLIGRRFKDDEVQRDVDIMPFKIIG--ADNGDAWVEQRGNK--MAPPQVSAEILKKMKKTAEDFLGEEVTEAVITVPAYFNDSQRQATKDAGRIAGLEVKRIINEPTAAALAYGIDKKQ---GDNIVAVYDLGGGTFDISIIEIDSNDGDQTFEVLATNGDTHLGGEDFDNRLINYLADEFKKDQGLDLRRDPLAMQRLKEAAEKAKIELSSTNQTEVNL 282          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_RUTMC (Chaperone protein dnaK OS=Ruthia magnifica subsp. Calyptogena magnifica GN=dnaK PE=2 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 2.103e-57
Identity = 122/226 (53.98%), Postives = 158/226 (69.91%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T++  K LIGRRF + +VQ D+ L P+K++    D     V  KG  K+ AA EIS+ V+ KM++ AE YLG  +  AV+TVPAYFNDSQRQATKDAG IAGLNV RIINEPTAAA+AYG+DK     G K + ++DLGGGTFDVS++ +E    E  FEV +T GDT LGGEDFD R++ + V EFKR    D++ +P AL+RL+ A E+AK  LSS+ QT + +
Sbjct:   66 TLYAIKRLIGRRFDEDAVQKDINLVPYKIVK--VDNGDAWVEVKG--KKMAAPEISAKVIGKMKKTAEDYLGEEVTEAVITVPAYFNDSQRQATKDAGKIAGLNVKRIINEPTAAALAYGVDKVK---GNKTIAVYDLGGGTFDVSIIEMEDIDGEKHFEVLSTNGDTFLGGEDFDQRIIGYLVDEFKRDQGVDLTNDPMALQRLKEAAEKAKIELSSSEQTDVNL 284          
The following BLAST results are available for this feature:
BLAST of FC868656 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_RHIME1.233e-5753.15Chaperone protein dnaK OS=Rhizobium meliloti GN=dn... [more]
DNAK_PSEHT1.233e-5753.98Chaperone protein dnaK OS=Pseudoalteromonas halopl... [more]
DNAK_PHOLL1.233e-5751.33Chaperone protein dnaK OS=Photorhabdus luminescens... [more]
DNAK_SHESR1.610e-5753.10Chaperone protein dnaK OS=Shewanella sp. (strain M... [more]
DNAK_SHESM1.610e-5753.10Chaperone protein dnaK OS=Shewanella sp. (strain M... [more]
DNAK_PSEA61.610e-5754.42Chaperone protein dnaK OS=Pseudoalteromonas atlant... [more]
DNAK_VIBHB2.103e-5751.33Chaperone protein dnaK OS=Vibrio harveyi (strain A... [more]
DNAK_THISH2.103e-5753.10Chaperone protein dnaK OS=Thioalkalivibrio sp. (st... [more]
DNAK_SHEDO2.103e-5753.10Chaperone protein dnaK OS=Shewanella denitrificans... [more]
DNAK_RUTMC2.103e-5753.98Chaperone protein dnaK OS=Ruthia magnifica subsp. ... [more]

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Properties
Property NameValue
Genbank descriptionC31003B06EF AbioticL1 Citrus clementina cDNA clone C31003B06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868656 ID=FC868656; Name=FC868656; organism=Citrus clementina; type=EST; length=710bp
ACACCGTCTTTGATGCAAAGAGCTTGATTGGTAGGAGATTCAGCGATGCA
TCAGTCCAAGGAGATATGAAGCTATGGCCATTTAAGGTGATTGCTGGACC
AGCTGACAAGCCCATGATTGGTGTTAACTACAAGGGCGAAGAGAAGCAGT
TTGCTGCTGAGGAAATCTCGTCTATGGTGCTCATCAAGATGCGTGAGATT
GCCGAGGCTTACCTTGGCTCAACTATTAAGAATGCAGTCGTTACTGTCCC
TGCTTACTTCAATGACTCACAGAGGCAGGCCACCAAGGATGCTGGTGTCA
TTGCTGGGCTTAATGTGATGCGTATCATCAATGAGCCCACTGCTGCTGCC
ATTGCTTATGGCCTTGACAAGAAGGCTACTAGTGTGGGTGAGAAGAATGT
GTTGATCTTTGATTTGGGTGGTGGTACTTTTGATGTGTCGTTGCTCACTA
TTGAGGAGGGAATCTTTGAAGTGAAGGCTACTGCTGGAGACACTCATCTT
GGTGGTGAGGATTTTGATAACAGAATGGTGAATCATTTTGTTCAGGAGTT
TAAGAGGAAGAACAAGAAGGATATTAGTGGCAACCCTAGAGCTCTTAGGA
GATTGAGGACTGCTTGTGAGAGAGCGAAGAGGACTCTCTCCTCTACTGCC
CAGACTACAATTGAGATTGATTCTTTGTATGANGGTATTGACTTTCTACT
CACCATAACT
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