FC868656

Overview
NameFC868656
Unique NameFC868656
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length710
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_BORHD (Chaperone protein dnaK OS=Borrelia hermsii (strain DAH) GN=dnaK PE=2 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 2.747e-57
Identity = 113/222 (50.90%), Postives = 158/222 (71.17%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T++  K  +GRRF +  V  ++K+ P+KV  G        VN    +KQ +  EIS+  L KM+E AEAYLG T+  AV+TVPAYFND+QRQATKDAG IAGL+V RI+NEPTAAA+AYG++KK     E+ V ++DLGGGTFD+S+L + +G+FEVK+T GDTHLGG++FD+ ++ H + EFK+ +  D+S +  AL+RL+ A E+AK  LSS  + +I +
Sbjct:   65 TIYSIKRFMGRRFEE--VASEIKMVPYKVEKGQNGDAR--VNISNIKKQMSPPEISAATLTKMKETAEAYLGETVTEAVITVPAYFNDAQRQATKDAGKIAGLDVKRIVNEPTAAALAYGIEKK----NEEIVAVYDLGGGTFDISILELGDGVFEVKSTNGDTHLGGDNFDDEIIKHLITEFKKDSAIDLSNDKMALQRLKEAAEKAKIELSSAQEASINL 278          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_ACICJ (Chaperone protein dnaK OS=Acidiphilium cryptum (strain JF-5) GN=dnaK PE=2 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 2.747e-57
Identity = 115/222 (51.80%), Postives = 158/222 (71.17%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T++  K LIGRR+ D +V+ D  L  + ++ G  D     V  +G+  ++A  +ISS VL KM+E AEAYLG  +  AV+TVPAYFND+QRQATKDAG IAGL V+RIINEPTAAA+AYG+DKK        + ++DLGGGTFD+S+L + +G+FEVK+T GDT LGGEDFD R++++  +EFKR+   D+  +  AL+RL+ A E+AK  LSS+ +T I +
Sbjct:   65 TLYAVKRLIGRRYDDPTVEKDKGLVSYNIVRG--DNGDAWVESRGQ--RYAPSQISSFVLTKMKETAEAYLGEAVTQAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGMDKKQGG----TIAVYDLGGGTFDISILELGDGVFEVKSTNGDTFLGGEDFDQRVIDYLAEEFKREQGIDLRKDKLALQRLKEAAEKAKIELSSSKETEINL 278          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: HSP71_LEIMA (Heat shock 70-related protein 1, mitochondrial OS=Leishmania major GN=HSP70.1 PE=3 SV=3)

HSP 1 Score: 221.476 bits (563), Expect = 3.587e-57
Identity = 116/231 (50.22%), Postives = 159/231 (68.83%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVI-AGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYXGID 692
            T +  K LIGRRF D  +Q D+K  P+K++ AG  D  +      G  KQ++  +I + VL KM+E AE +LG  + NAVVT PAYFND+QRQATKDAG IAGLNV+R++NEPTAAA+AYG+DK   S+    + ++DLGGGTFD+S+L I  G+FEVKAT GDTHLGGEDFD  + ++ ++EF++ +  D+S    AL+R+R A E+AK  LSS  +T + +  +    D
Sbjct:   89 TFYAVKRLIGRRFEDEHIQKDIKNVPYKIVRAGNGDAWV----QDGNGKQYSPSQIGAFVLEKMKETAENFLGHKVSNAVVTCPAYFNDAQRQATKDAGTIAGLNVIRVVNEPTAAALAYGMDKTKDSL----IAVYDLGGGTFDISVLEIAGGVFEVKATNGDTHLGGEDFDLALSDYILEEFRKTSGIDLSKERMALQRVREAAEKAKCELSSAMETEVNLPFITANAD 311          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_METNO (Chaperone protein dnaK OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=dnaK PE=2 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 3.587e-57
Identity = 120/223 (53.81%), Postives = 154/223 (69.06%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVI-AGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T F  K LIGR + D   Q D  L P+ +  AG  D  +       + KQF+  +IS+  L KM+E AE+YLG  +  AV+TVPAYFND+QRQATKDAG IAGL V+RIINEPTAAA+AYGLDK+ + V    + ++DLGGGTFDVS+L I +G+FEVK+T GDT LGGEDFDNR+V +   EFKR+   D++ +  AL+RL+ A E+AK  LSS  QT I +
Sbjct:   65 TFFAIKRLIGRTYDDPMTQKDKGLVPYAITRAGNGDAWVAA-----DGKQFSPSQISAFTLQKMKETAESYLGQPVTQAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKRKSGV----IAVYDLGGGTFDVSILEIGDGVFEVKSTNGDTFLGGEDFDNRIVEYLAAEFKREQGIDLTKDKLALQRLKEAAEKAKIELSSATQTEINL 278          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_HAEDU (Chaperone protein dnaK OS=Haemophilus ducreyi GN=dnaK PE=2 SV=2)

HSP 1 Score: 221.476 bits (563), Expect = 3.587e-57
Identity = 117/226 (51.77%), Postives = 162/226 (71.68%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGRRF+D  VQ D+++ PF++    AD     VN KG++   A  +IS+ VL KM++ AE +LG  +  AV+TVPAYFND+QRQATKDAG IAGL V RIINEPTAAA+AYGLD K  +   + + ++DLGGGTFD+S++ I+    E  FEV+AT GDTHLGGEDFDNR++N+ V+EF+++   D+  +P A++R++ A E+AK  LSS  +T + +
Sbjct:   64 TLFAIKRLIGRRFTDNEVQRDIEIMPFEI--AKADNGDAWVNVKGDK--LAPPQISAEVLKKMKKTAEDFLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDSKKEN---QIIAVYDLGGGTFDISIIEIDNFDGEQTFEVRATNGDTHLGGEDFDNRVINYLVEEFQKEQGVDLRNDPMAMQRVKEAAEKAKIELSSAQETEVNL 282          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_AERS4 (Chaperone protein dnaK OS=Aeromonas salmonicida (strain A449) GN=dnaK PE=2 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 3.587e-57
Identity = 122/226 (53.98%), Postives = 157/226 (69.47%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGRRF D  VQ D+K+ P+ +    AD     V  KG  K+ A  +IS+ VL KM++ AE YLG  +  AV+TVPAYFND+QRQATKDAG IAGL+V RIINEPTAAA AYG++K     GE+ V ++DLGGGTFD+S++ I+    E  FEV AT G+THLGGEDFDNR++N+ V EFKR+   D+  +  AL+RL+ A E+AK  LSS  QT + +
Sbjct:   65 TLFAIKRLIGRRFEDEEVQRDLKIMPYAI--AKADNGDAWVEVKG--KKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLDVKRIINEPTAAAFAYGVNKVK---GERKVAVYDLGGGTFDISIIEIDEVEGETTFEVLATNGNTHLGGEDFDNRVINYLVDEFKREQGIDLRNDQLALQRLKDAAEKAKIELSSAQQTDVNL 283          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_SHEWM (Chaperone protein dnaK OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=dnaK PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 4.685e-57
Identity = 115/226 (50.88%), Postives = 155/226 (68.58%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T F  K LIGRRF D  VQ D+ + PFK+I        +    +  +K+ A  ++S+ +L KM++ AE +LG  +  AV+TVPAYFNDSQRQATKDAG IAGL V RIINEPTAAA+AYG+DKK    G+  V ++DLGGGTFD+S++ I+    E  FEV AT GDTHLGGEDFDNR++ +   EF+++   ++  +P A++RL+ A E+AK  LSST QT + +
Sbjct:   64 TFFAIKRLIGRRFKDDEVQRDVDIMPFKIIGADNGDAWV----EAHDKKMAPPQVSAEILKKMKKTAEDFLGEEVTEAVITVPAYFNDSQRQATKDAGRIAGLEVKRIINEPTAAALAYGIDKKQ---GDNIVAVYDLGGGTFDISIIEIDSVDGEQTFEVLATNGDTHLGGEDFDNRLIKYLADEFEKEQGMNLRNDPLAMQRLKEAAEKAKIELSSTTQTEVNL 282          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_SHESW (Chaperone protein dnaK OS=Shewanella sp. (strain W3-18-1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 4.685e-57
Identity = 119/226 (52.65%), Postives = 157/226 (69.47%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T F  K LIGRRF D  VQ D+ + PFK+I   AD     V  +G +   A  ++S+ +L KM++ AE +LG  +  AV+TVPAYFNDSQRQATKDAG IAGL+V RIINEPTAAA+AYG+DKK    G+  V ++DLGGGTFD+S++ I+    +  FEV AT GDTHLGGEDFDNR++N+   EFK++   D+  +P A++RL+ A E+AK  LSST  T + +
Sbjct:   64 TFFAIKRLIGRRFKDDEVQRDVNIMPFKIIQ--ADNGDAWVESRGNK--MAPPQVSAEILKKMKKTAEDFLGEEVTEAVITVPAYFNDSQRQATKDAGRIAGLDVKRIINEPTAAALAYGIDKKQ---GDNIVAVYDLGGGTFDISIIEIDSNDGDQTFEVLATNGDTHLGGEDFDNRLINYLADEFKKEQGLDLRKDPLAMQRLKEAAEKAKIELSSTNHTEVNL 282          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_SHEPC (Chaperone protein dnaK OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=dnaK PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 4.685e-57
Identity = 119/226 (52.65%), Postives = 157/226 (69.47%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T F  K LIGRRF D  VQ D+ + PFK+I   AD     V  +G +   A  ++S+ +L KM++ AE +LG  +  AV+TVPAYFNDSQRQATKDAG IAGL+V RIINEPTAAA+AYG+DKK    G+  V ++DLGGGTFD+S++ I+    +  FEV AT GDTHLGGEDFDNR++N+   EFK++   D+  +P A++RL+ A E+AK  LSST  T + +
Sbjct:   64 TFFAIKRLIGRRFKDDEVQRDVNIMPFKIIQ--ADNGDAWVESRGNK--MAPPQVSAEILKKMKKTAEDFLGEEVTEAVITVPAYFNDSQRQATKDAGRIAGLDVKRIINEPTAAALAYGIDKKQ---GDNIVAVYDLGGGTFDISIIEIDSNDGDQTFEVLATNGDTHLGGEDFDNRLINYLADEFKKEQGLDLRKDPLAMQRLKEAAEKAKIELSSTNHTEVNL 282          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_PELPD (Chaperone protein dnaK OS=Pelobacter propionicus (strain DSM 2379) GN=dnaK PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 4.685e-57
Identity = 117/222 (52.70%), Postives = 160/222 (72.07%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T++  K LIGR+F   +V+ D+ + PFK++   AD     V  +G  K+++  EIS+ VL KM++ AE YLG T+ +AV+TVPAYF+DSQRQATKDAG IAGLNV+RIINEPTAAA+AYGLDKK     E+ V +FDLGGGTFD+S+L + +G+FEVK+T GDT LGGEDFD  +++    EF +    ++ G+  AL+RL+ A E+AK  LSS+ +T I +
Sbjct:   65 TLYAIKRLIGRKFDTEAVKRDIAISPFKIVK--ADNNDAWVEARG--KRYSPPEISAFVLQKMKQTAEDYLGQTVTDAVITVPAYFDDSQRQATKDAGKIAGLNVLRIINEPTAAALAYGLDKKK----EEKVAVFDLGGGTFDISILELGDGVFEVKSTNGDTFLGGEDFDQLVIDWIADEFHKDQGINLRGDKMALQRLKEAAEKAKCELSSSMETDINL 278          
The following BLAST results are available for this feature:
BLAST of FC868656 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_BORHD2.747e-5750.90Chaperone protein dnaK OS=Borrelia hermsii (strain... [more]
DNAK_ACICJ2.747e-5751.80Chaperone protein dnaK OS=Acidiphilium cryptum (st... [more]
HSP71_LEIMA3.587e-5750.22Heat shock 70-related protein 1, mitochondrial OS=... [more]
DNAK_METNO3.587e-5753.81Chaperone protein dnaK OS=Methylobacterium nodulan... [more]
DNAK_HAEDU3.587e-5751.77Chaperone protein dnaK OS=Haemophilus ducreyi GN=d... [more]
DNAK_AERS43.587e-5753.98Chaperone protein dnaK OS=Aeromonas salmonicida (s... [more]
DNAK_SHEWM4.685e-5750.88Chaperone protein dnaK OS=Shewanella woodyi (strai... [more]
DNAK_SHESW4.685e-5752.65Chaperone protein dnaK OS=Shewanella sp. (strain W... [more]
DNAK_SHEPC4.685e-5752.65Chaperone protein dnaK OS=Shewanella putrefaciens ... [more]
DNAK_PELPD4.685e-5752.70Chaperone protein dnaK OS=Pelobacter propionicus (... [more]

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Properties
Property NameValue
Genbank descriptionC31003B06EF AbioticL1 Citrus clementina cDNA clone C31003B06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868656 ID=FC868656; Name=FC868656; organism=Citrus clementina; type=EST; length=710bp
ACACCGTCTTTGATGCAAAGAGCTTGATTGGTAGGAGATTCAGCGATGCA
TCAGTCCAAGGAGATATGAAGCTATGGCCATTTAAGGTGATTGCTGGACC
AGCTGACAAGCCCATGATTGGTGTTAACTACAAGGGCGAAGAGAAGCAGT
TTGCTGCTGAGGAAATCTCGTCTATGGTGCTCATCAAGATGCGTGAGATT
GCCGAGGCTTACCTTGGCTCAACTATTAAGAATGCAGTCGTTACTGTCCC
TGCTTACTTCAATGACTCACAGAGGCAGGCCACCAAGGATGCTGGTGTCA
TTGCTGGGCTTAATGTGATGCGTATCATCAATGAGCCCACTGCTGCTGCC
ATTGCTTATGGCCTTGACAAGAAGGCTACTAGTGTGGGTGAGAAGAATGT
GTTGATCTTTGATTTGGGTGGTGGTACTTTTGATGTGTCGTTGCTCACTA
TTGAGGAGGGAATCTTTGAAGTGAAGGCTACTGCTGGAGACACTCATCTT
GGTGGTGAGGATTTTGATAACAGAATGGTGAATCATTTTGTTCAGGAGTT
TAAGAGGAAGAACAAGAAGGATATTAGTGGCAACCCTAGAGCTCTTAGGA
GATTGAGGACTGCTTGTGAGAGAGCGAAGAGGACTCTCTCCTCTACTGCC
CAGACTACAATTGAGATTGATTCTTTGTATGANGGTATTGACTTTCTACT
CACCATAACT
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