FC868656

Overview
NameFC868656
Unique NameFC868656
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length710
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_NITWN (Chaperone protein dnaK OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=dnaK PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 4.685e-57
Identity = 117/223 (52.47%), Postives = 157/223 (70.40%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVI-AGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGRR+ D +V+ D +L P+K+  AG  D  +     + + K ++  +IS+  L KM+E AEA+LG  +  AV+TVPAYFND+QRQATKDAG IAGL V+RIINEPTAAA+AYGLDK         + ++DLGGGTFDVS+L I +G+FEVK+T GDT LGGEDFD R+VN+   EF+++   ++  +  AL+RL+ A E+AK  LSST QT I +
Sbjct:   65 TIFAVKRLIGRRYDDPTVEKDKQLVPYKIAKAGNGDAWV-----EADGKTYSPSQISAFTLQKMKETAEAHLGQKVDQAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKSKAG----TIAVYDLGGGTFDVSVLEIGDGVFEVKSTNGDTFLGGEDFDMRLVNYLADEFQKEQGINLRNDKLALQRLKEAAEKAKIELSSTTQTEINL 278          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_MAGSA (Chaperone protein dnaK OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=dnaK PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 4.685e-57
Identity = 113/222 (50.90%), Postives = 156/222 (70.27%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGRRF D   + DM L P+ ++AG      +    +  + +++  ++S+ +L KM+E AE YLG  +  AV+TVPAYFND+QRQATKDAG IAGL V+RIINEPTAAA+AYGL+KK    G   + ++DLGGGTFDVS+L I +G+FEVK+T GDT LGGEDFD R++++   EFK++   D+  +  AL+RL+ A E+AK  LSS+ QT + +
Sbjct:   65 TLFAIKRLIGRRFEDPITKKDMNLVPYHIVAGDNGDAWV----EARDAKYSPSQVSAFILQKMKETAEGYLGEKVTQAVITVPAYFNDAQRQATKDAGRIAGLEVLRIINEPTAAALAYGLEKK----GAGTIAVYDLGGGTFDVSVLEIGDGVFEVKSTNGDTFLGGEDFDARIMDYLADEFKKEQGIDLRKDRLALQRLKEAAEKAKIELSSSMQTEVNL 278          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_CAUSK (Chaperone protein dnaK OS=Caulobacter sp. (strain K31) GN=dnaK PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 4.685e-57
Identity = 113/222 (50.90%), Postives = 155/222 (69.82%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGR F+D  V  D  + P++++ GP     +    K   K ++ +E+S+ +L KM+E AE++LG  +  AV+TVPAYFND+QRQATKDAG IAGL V+RIINEPTAAA+AYGL+        K + ++DLGGGTFDVS+L I +G+FEVK+T GDT LGGEDFD R+V++   EFK++   D+  +  AL+RLR   E+AK+ LSSTAQ  + +
Sbjct:   65 TLFAIKRLIGRNFADPVVAKDKAMVPYEIVKGPTGDAWV----KAHGKDYSPQEVSAFILQKMKEAAESHLGEPVTKAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGLEMNE----GKKIAVYDLGGGTFDVSVLEIGDGVFEVKSTNGDTFLGGEDFDLRIVDYLADEFKKEQGVDLRKDKLALQRLREEAEKAKKELSSTAQYEVNL 278          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: HSP7M_DICDI (Heat shock 70 kDa protein, mitochondrial OS=Dictyostelium discoideum GN=mhsp70 PE=1 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 6.119e-57
Identity = 120/228 (52.63%), Postives = 152/228 (66.67%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYXG 686
            T+F  K LIGRRF D   + DM + P+K++ GP       V  KG  K  +  E  +MVL KM+E AE  LG  + +AV+TVPAYF+DSQRQAT+DAG IAGL V RIINEPTAAA+AYG  K       K V ++DLGGGTFD+S+L I  G+FEV+AT GDT LGGEDFDN ++ HFV EFK++   D++ +  A +RLR A E+AK  LSST  T I +  +  G
Sbjct:   93 TLFATKRLIGRRFDDPMTKKDMTMVPYKIVKGPNGDAWFEV--KG--KMISPSEAGAMVLQKMKETAETNLGGPVTDAVITVPAYFDDSQRQATRDAGTIAGLKVQRIINEPTAAALAYGFKKDEP----KTVAVYDLGGGTFDISILEIVGGVFEVRATNGDTFLGGEDFDNALLEHFVAEFKKEKGIDLTKDTMATQRLREAAEKAKCELSSTLTTEINLPYISAG 312          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_ZYMMO (Chaperone protein dnaK OS=Zymomonas mobilis GN=dnaK PE=2 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 6.119e-57
Identity = 116/219 (52.97%), Postives = 155/219 (70.78%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTT 659
            T+F  K LIGRRF D   + D +L P+ ++ G      +    K   + ++  +IS+ +L KM+E AE+YLG T+  AV+TVPAYFND+QRQATKDAG IAGL V+RIINEPTAAA+AYGLDK       K + ++DLGGGTFD+S+L I +G+FEVKAT GDT LGGEDFD ++V++  +EFK+    D++ +  AL+RL+ A E+AK  LSS AQTT
Sbjct:   65 TIFAVKRLIGRRFDDPVTKRDTELVPYHIVRGSNGDAWV----KAGGQDYSPSQISAFILQKMKETAESYLGETVDQAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKN----DGKTIAVYDLGGGTFDISILEIGDGVFEVKATNGDTFLGGEDFDTKIVSYLAEEFKKAEGIDLTKDRLALQRLKEAAEKAKIELSS-AQTT 274          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_THEYD (Chaperone protein dnaK OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=dnaK PE=2 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 6.119e-57
Identity = 113/222 (50.90%), Postives = 158/222 (71.17%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K L+GR+++   VQ   K  P+K++  P     + +      K+++  EIS+M+L K+++ AE YLG  +  AV+TVPAYF+DSQRQATKDAG IAGLNV+RIINEPTAAA+AYGLDKK     E+ + ++DLGGGTFD+S+L I EG+ EVKAT GDT+LGG+DFD R+++  ++EFK++   D+  +  AL+RL+ A ERAK  LSS  +T I +
Sbjct:   65 TIFSIKRLMGRKYNSQEVQEAKKRLPYKIVEAPNGDAHVEIM----GKRYSPPEISAMILQKLKQAAEDYLGEPVTEAVITVPAYFDDSQRQATKDAGRIAGLNVLRIINEPTAAALAYGLDKKK----EEKIAVYDLGGGTFDISILEIGEGVIEVKATNGDTYLGGDDFDIRVMDWLIEEFKKQEGIDLRKDRMALQRLKEAAERAKIELSSAMETEINL 278          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_SULMW (Chaperone protein dnaK OS=Sulcia muelleri (strain GWSS) GN=dnaK PE=2 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 6.119e-57
Identity = 112/222 (50.45%), Postives = 160/222 (72.07%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K  +GR FS+  V  ++K  P+K+I G  D P + +      K +  +EIS+M+L KM++ AE YLG+ +K AV+TVPAYFND+QRQATK+AG IAGLNV RIINEPTAAA+AYGLDK   +   K ++++DLGGGTFD+S+L + +G+FEV +T+GDTHLGG+DFD  +++  V+EFK +   D+S +  A +RL+ + E+AK  LSS+ +T I +
Sbjct:   65 TIFSIKRFMGRNFSE--VTEELKNIPYKIIKGENDTPRVSIG----NKLYTPQEISAMILQKMKKTAEDYLGNEVKQAVITVPAYFNDAQRQATKEAGEIAGLNVERIINEPTAAALAYGLDKNNQN---KKIVVYDLGGGTFDISILELGDGVFEVLSTSGDTHLGGDDFDKVIIDWLVKEFKVEQGVDLSNDSMAYQRLKESAEKAKIELSSSTKTEINL 277          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_DESDG (Chaperone protein dnaK OS=Desulfovibrio desulfuricans (strain G20) GN=dnaK PE=2 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 6.119e-57
Identity = 112/222 (50.45%), Postives = 160/222 (72.07%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            TVF  K L+GR+     V    +  P++++AGP     + +    E ++++  E+S+MVL K++  AEAYLG T+  AV+TVPAYFNDSQRQ+TKDAG IAGL+V RIINEPTAA++AYG DKKA     + + +FDLGGGTFD+S+L + + + EV+AT GDT LGGEDFD R++N+ V+EF+R+N  D+S +  AL+RL+ A E+AK+ LS++ +T I +
Sbjct:   64 TVFAIKRLMGRKADAPEVARWKEHSPYQIVAGPNGDAYVEI----EGRKYSPAEVSAMVLAKLKADAEAYLGETVTEAVITVPAYFNDSQRQSTKDAGRIAGLDVKRIINEPTAASLAYGFDKKA----NEKIAVFDLGGGTFDISILEVGDNVVEVRATNGDTFLGGEDFDQRVINYLVEEFRRENGIDLSRDRMALQRLKEAAEKAKKDLSTSMETEINL 277          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_RHOP5 (Chaperone protein dnaK OS=Rhodopseudomonas palustris (strain BisA53) GN=dnaK PE=2 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 7.991e-57
Identity = 113/222 (50.90%), Postives = 155/222 (69.82%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T F  K LIGRR+ D  V+ D KL P+K++        +    + +   ++  ++S+ +L KM+E AEA+LG+ +  AV+TVPAYFND+QRQATKDAG IAGL V+RIINEPTAAA+AYGLDK    V    + ++DLGGGTFDVS+L I +G+FEVK+T GDT LGGEDFD R+V++   EF+++   ++  +  AL+RL+ A E+AK  LSST QT I +
Sbjct:   65 TFFAVKRLIGRRYDDPMVEKDKKLVPYKIVKASNGDAWV----EADANTYSPSQVSAFILQKMKETAEAHLGAKVDQAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKAKAGV----IAVYDLGGGTFDVSILEIGDGVFEVKSTNGDTFLGGEDFDMRLVSYLADEFQKEQGINLRNDKLALQRLKEAAEKAKIELSSTTQTEINL 278          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_PASHA (Chaperone protein dnaK OS=Pasteurella haemolytica GN=dnaK PE=2 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 7.991e-57
Identity = 118/226 (52.21%), Postives = 162/226 (71.68%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGRRF+DA VQ D+++ PF++    AD     V  KG++   A  +IS+ +L KM++ AE +LG  +  AV+TVPAYFND+QRQATKDAG IAGL+V RIINEPTAAA+AYGLD K  +   + + ++DLGGGTFD+S++ I+    E  FEV+AT GDTHLGGEDFDNR++N+ V+EFK K   D+  +P A++R++ A E+AK  LSS  +T + +
Sbjct:   64 TLFAIKRLIGRRFTDAEVQRDIEIMPFEI--SKADNGDAWVTVKGDK--LAPPQISAEILKKMKKTAEDFLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLDVKRIINEPTAAALAYGLDSKKEN---QTIAVYDLGGGTFDISIIEIDNFDGEQTFEVRATNGDTHLGGEDFDNRVINYLVEEFK-KQGVDLRNDPMAMQRVKEAAEKAKIELSSAQETEVNL 281          
The following BLAST results are available for this feature:
BLAST of FC868656 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_NITWN4.685e-5752.47Chaperone protein dnaK OS=Nitrobacter winogradskyi... [more]
DNAK_MAGSA4.685e-5750.90Chaperone protein dnaK OS=Magnetospirillum magneti... [more]
DNAK_CAUSK4.685e-5750.90Chaperone protein dnaK OS=Caulobacter sp. (strain ... [more]
HSP7M_DICDI6.119e-5752.63Heat shock 70 kDa protein, mitochondrial OS=Dictyo... [more]
DNAK_ZYMMO6.119e-5752.97Chaperone protein dnaK OS=Zymomonas mobilis GN=dna... [more]
DNAK_THEYD6.119e-5750.90Chaperone protein dnaK OS=Thermodesulfovibrio yell... [more]
DNAK_SULMW6.119e-5750.45Chaperone protein dnaK OS=Sulcia muelleri (strain ... [more]
DNAK_DESDG6.119e-5750.45Chaperone protein dnaK OS=Desulfovibrio desulfuric... [more]
DNAK_RHOP57.991e-5750.90Chaperone protein dnaK OS=Rhodopseudomonas palustr... [more]
DNAK_PASHA7.991e-5752.21Chaperone protein dnaK OS=Pasteurella haemolytica ... [more]

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Properties
Property NameValue
Genbank descriptionC31003B06EF AbioticL1 Citrus clementina cDNA clone C31003B06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868656 ID=FC868656; Name=FC868656; organism=Citrus clementina; type=EST; length=710bp
ACACCGTCTTTGATGCAAAGAGCTTGATTGGTAGGAGATTCAGCGATGCA
TCAGTCCAAGGAGATATGAAGCTATGGCCATTTAAGGTGATTGCTGGACC
AGCTGACAAGCCCATGATTGGTGTTAACTACAAGGGCGAAGAGAAGCAGT
TTGCTGCTGAGGAAATCTCGTCTATGGTGCTCATCAAGATGCGTGAGATT
GCCGAGGCTTACCTTGGCTCAACTATTAAGAATGCAGTCGTTACTGTCCC
TGCTTACTTCAATGACTCACAGAGGCAGGCCACCAAGGATGCTGGTGTCA
TTGCTGGGCTTAATGTGATGCGTATCATCAATGAGCCCACTGCTGCTGCC
ATTGCTTATGGCCTTGACAAGAAGGCTACTAGTGTGGGTGAGAAGAATGT
GTTGATCTTTGATTTGGGTGGTGGTACTTTTGATGTGTCGTTGCTCACTA
TTGAGGAGGGAATCTTTGAAGTGAAGGCTACTGCTGGAGACACTCATCTT
GGTGGTGAGGATTTTGATAACAGAATGGTGAATCATTTTGTTCAGGAGTT
TAAGAGGAAGAACAAGAAGGATATTAGTGGCAACCCTAGAGCTCTTAGGA
GATTGAGGACTGCTTGTGAGAGAGCGAAGAGGACTCTCTCCTCTACTGCC
CAGACTACAATTGAGATTGATTCTTTGTATGANGGTATTGACTTTCTACT
CACCATAACT
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