FC868656

Overview
NameFC868656
Unique NameFC868656
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length710
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_GLUDA (Chaperone protein dnaK OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) GN=dnaK PE=2 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 7.991e-57
Identity = 114/222 (51.35%), Postives = 155/222 (69.82%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T++  K LIGRR+ D +V  D  L P+ ++AG      +    + + K++A  +I++ VL KM+E AEAYLG  +  AV+TVPAYFND+QRQATKDAG IAGL V+RIINEPTAAA+AYGL KK        + ++DLGGGTFDVS+L I +G+ EVK+T GDT LGGEDFD R++++   EFKR+   D+  +  AL+RL+ A E+AK  LSS+ +T I +
Sbjct:   65 TLYAVKRLIGRRYDDPTVTKDKALVPYSIVAGDNGDAWV----EAQGKKYAPSQIAAFVLGKMKETAEAYLGEPVSQAVITVPAYFNDAQRQATKDAGRIAGLEVLRIINEPTAAALAYGLQKK----NGGTIAVYDLGGGTFDVSILEISDGVIEVKSTNGDTFLGGEDFDARVISYLADEFKREQGIDLRADKLALQRLKEAAEKAKIELSSSKETEINL 278          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_WIGBR (Chaperone protein dnaK OS=Wigglesworthia glossinidia brevipalpis GN=dnaK PE=2 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.044e-56
Identity = 114/226 (50.44%), Postives = 163/226 (72.12%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T F  K LIGR+F+D  VQ D+ + P+K+++  ++   + +N K ++   A  +IS+ +L KM++ AE Y+G +I  AV+TVPAYFND+QRQATKDAG IAGL+V RIINEPTAAA+AYGLDKK    G + + ++DLGGGTFD+S++ I+    E  FEV +T GDTHLGGEDFD+R++N+ V EFK++   D+  +P A++RL+ + E+AK  LSS  QT + +
Sbjct:   69 TFFAIKRLIGRKFTDHEVQRDVNIMPYKIVS--SENGDVWLNVKNQK--VAPPQISAEILKKMKKTAEDYIGKSITEAVITVPAYFNDTQRQATKDAGKIAGLDVKRIINEPTAAALAYGLDKK---TGNRIIAVYDLGGGTFDISIIEIDDVDGEKTFEVLSTNGDTHLGGEDFDSRLINYLVNEFKKEQGIDLRNDPLAMQRLKESSEKAKIELSSVHQTDVNL 287          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_METRJ (Chaperone protein dnaK OS=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) GN=dnaK PE=2 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.044e-56
Identity = 115/222 (51.80%), Postives = 153/222 (68.92%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T F  K LIGR + D   Q D  L P+K+  G      +    + + K+++  +IS+  L KM+E AE++LG  +  AV+TVPAYFND+QRQATKDAG IAGL V+RIINEPTAAA+AYGLDKK +      + ++DLGGGTFDVS+L I +G+FEVK+T GDT LGGEDFDNR+V +   EFK++   D++ +  AL+RL+ A E+AK  LSS  QT I +
Sbjct:   65 TFFAIKRLIGRTYDDPMTQKDKGLVPYKIARGDNGDAWV----EADGKKYSPSQISAFTLQKMKETAESHLGQPVTQAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKKKSG----TIAVYDLGGGTFDVSILEIGDGVFEVKSTNGDTFLGGEDFDNRIVEYLTAEFKKEQGIDLTKDKLALQRLKEAAEKAKIELSSATQTEINL 278          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK1_COLP3 (Chaperone protein dnaK 1 OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=dnaK1 PE=2 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.044e-56
Identity = 119/226 (52.65%), Postives = 161/226 (71.24%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGR+F D  VQ D+KL P+K++   AD     V   G  K  + +E+S+ +L K+++ AEAYLG T+ +AV+TVPAYFNDSQRQATKDAG IAGLNV RIINEPTAAA+AYG+DK + +  ++ V+++DLGGGTFD+S++ I     E  FEV AT GDT LGGEDFD R++N+   EFK+++  DI  +  AL+R++ A E+AK  LSS  QT + +
Sbjct:   64 TLFAIKRLIGRKFDDKEVQKDIKLAPYKIVK--ADNGDAWVEVDG--KALSPQEVSAQILRKLKKDAEAYLGETVTDAVITVPAYFNDSQRQATKDAGKIAGLNVKRIINEPTAAALAYGVDKNSNA--DQKVVVYDLGGGTFDLSIIEISNVDGEKQFEVLATNGDTFLGGEDFDLRLINYLADEFKKESGIDIHQDTLALQRIKEAAEKAKIELSSALQTEVNL 283          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_TOLAT (Chaperone protein dnaK OS=Tolumonas auensis (strain DSM 9187 / TA4) GN=dnaK PE=2 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.363e-56
Identity = 118/226 (52.21%), Postives = 160/226 (70.80%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T++  K LIGRR+ D  VQ D+K+ PF ++   AD     V+ KG  ++ AA +IS+ VL KM++ AE +LG  +  AV+TVPAYFND+QRQATKDAG IAGL+V RIINEPTAAA AYG++K     GE+ + ++DLGGGTFD+S++ I+    E  FEV +T GDTHLGGEDFDNR++N+ V EFKR+   D+  +  AL+RL+ + E+AK  LSS  QT + +
Sbjct:   65 TLYAIKRLIGRRYEDEEVQRDIKIMPFDIVR--ADNGDAWVDVKG--RKLAAPQISAEVLKKMKKTAEDFLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLDVKRIINEPTAAAFAYGVNKVQ---GERKIAVYDLGGGTFDISIIEIDEMDGEKTFEVLSTNGDTHLGGEDFDNRLINYLVDEFKREQGIDLRKDQLALQRLKDSAEKAKIELSSAQQTEVNL 283          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_METPB (Chaperone protein dnaK OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=dnaK PE=2 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.363e-56
Identity = 115/222 (51.80%), Postives = 153/222 (68.92%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T F  K LIGR + D   Q D  L P+K+  G      +    + + K+++  +IS+  L KM+E AE++LG  +  AV+TVPAYFND+QRQATKDAG IAGL V+RIINEPTAAA+AYGLDKK +      + ++DLGGGTFDVS+L I +G+FEVK+T GDT LGGEDFDNR+V +   EFK++   D++ +  AL+RL+ A E+AK  LSS  QT I +
Sbjct:   65 TFFAIKRLIGRTYDDPLTQKDKGLVPYKIARGDNGDAWV----EADGKKYSPSQISAFTLQKMKETAESHLGQPVTQAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKKKSG----TIAVYDLGGGTFDVSILEIGDGVFEVKSTNGDTFLGGEDFDNRVVEYLTAEFKKEQGIDLTKDKLALQRLKEAAEKAKIELSSATQTEINL 278          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_MAGSM (Chaperone protein dnaK OS=Magnetococcus sp. (strain MC-1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.363e-56
Identity = 117/222 (52.70%), Postives = 156/222 (70.27%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T++  K LIGRRFSD     D  L P+K++   AD     V   G  K+ +  E S+M+L KM++ AE YLG ++  AV+TVPAYFND+QRQATKDAG IAGL V+RIINEPTAAA+AYGLDKK      + + +FDLGGGTFD+S+L I +G+FEVK+T GDT LGGEDFD  ++++   +FK++N  D+  +  AL+RL+ A E+AK  LSS+ QT I +
Sbjct:   65 TLYAIKRLIGRRFSDPLTAKDQGLVPYKIVK--ADNGDAWVEADG--KKMSPSECSAMILQKMKQTAEDYLGESVSEAVITVPAYFNDAQRQATKDAGRIAGLEVLRIINEPTAAALAYGLDKK----DGQTIAVFDLGGGTFDISILEIGDGVFEVKSTNGDTFLGGEDFDMAIIDYLADQFKKENSIDLRKDSMALQRLKEAAEKAKIELSSSNQTDINL 278          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_HAMD5 (Chaperone protein dnaK OS=Hamiltonella defensa subsp. Acyrthosiphon pisum (strain 5AT) GN=dnaK PE=2 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.363e-56
Identity = 118/226 (52.21%), Postives = 156/226 (69.03%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T F  K L+GR+FSD   Q D  + PF ++   +D     ++ KG++   A  +IS+ VL KM++ AE YLG T+  AVVTVPAYFND+QRQATKDAG I+GL + RIINEPTAAAIAYGLDK     G   + ++DLGGGTFD+S++ I+    E  FEV AT GDTHLGGEDFDNR++N+ V EFK++   D+  +P A++RL+ A E+AK  LSS  QT + +
Sbjct:   65 TFFAIKRLVGRKFSDQETQRDKDIMPFDILE--SDNGDAWLSVKGQKT--APPQISAEVLKKMKKTAEDYLGETVTEAVVTVPAYFNDAQRQATKDAGRISGLEIKRIINEPTAAAIAYGLDK---GKGNSTIAVYDLGGGTFDISIIEIDDVDGEKTFEVLATNGDTHLGGEDFDNRLINYLVDEFKKEQGFDLRKDPLAMQRLKEAAEKAKVELSSAQQTDVNL 283          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_GLOVI (Chaperone protein dnaK OS=Gloeobacter violaceus GN=dnaK PE=2 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.363e-56
Identity = 116/230 (50.43%), Postives = 158/230 (68.70%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYXGID 692
            T +  K  IGR++ +  +  + K   ++V+   ++  +   N   E+K FA EEIS++VL K+ + A  YLG  I  AV+TVPAYFNDSQRQATKDAG IAG+ V+RIINEPTAAA+AYGLDKKA     + +L+FDLGGGTFDVS+L + +G+FEVK+T+GDTHLGG+DFD R+V++   EFK+    D+  + +AL+RL  A E+AK  LS   QT I +  +  G D
Sbjct:   65 TFYSVKRFIGRKYDE--ITDEAKQVAYRVVRDGSNVKLHSTN---EDKDFAPEEISALVLRKLVDDASKYLGEKITQAVITVPAYFNDSQRQATKDAGRIAGIEVLRIINEPTAAALAYGLDKKA----NETILVFDLGGGTFDVSILEVGDGVFEVKSTSGDTHLGGDDFDRRIVDYLADEFKKLEGVDLRTDRQALQRLTEAAEKAKIELSGVTQTQINLPFITAGAD 285          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_BRAJA (Chaperone protein dnaK OS=Bradyrhizobium japonicum GN=dnaK PE=2 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.363e-56
Identity = 112/222 (50.45%), Postives = 154/222 (69.37%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T F  K LIGRR+ D  V+ D KL P+K++        +    + + + ++  ++S+ +L KM+E AEA+LG  +  AV+TVPAYFND+QRQATKDAG IAGL V+RIINEPTAAA+AYGLDK  T      + ++DLGGGTFD+S+L I +G+FEVK+T GDT LGGEDFD R+V +   EF+++   ++  +  AL+RL+ A E+AK  LSST QT I +
Sbjct:   65 TFFAVKRLIGRRYDDPMVEKDKKLVPYKIVKASNGDAWV----EADGQTYSPSQVSAFILQKMKETAEAHLGQKVDQAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKTKTG----TIAVYDLGGGTFDISILEIGDGVFEVKSTNGDTFLGGEDFDMRLVGYLADEFQKEQGINLRNDKLALQRLKEAAEKAKIELSSTTQTEINL 278          
The following BLAST results are available for this feature:
BLAST of FC868656 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_GLUDA7.991e-5751.35Chaperone protein dnaK OS=Gluconacetobacter diazot... [more]
DNAK_WIGBR1.044e-5650.44Chaperone protein dnaK OS=Wigglesworthia glossinid... [more]
DNAK_METRJ1.044e-5651.80Chaperone protein dnaK OS=Methylobacterium radioto... [more]
DNAK1_COLP31.044e-5652.65Chaperone protein dnaK 1 OS=Colwellia psychrerythr... [more]
DNAK_TOLAT1.363e-5652.21Chaperone protein dnaK OS=Tolumonas auensis (strai... [more]
DNAK_METPB1.363e-5651.80Chaperone protein dnaK OS=Methylobacterium populi ... [more]
DNAK_MAGSM1.363e-5652.70Chaperone protein dnaK OS=Magnetococcus sp. (strai... [more]
DNAK_HAMD51.363e-5652.21Chaperone protein dnaK OS=Hamiltonella defensa sub... [more]
DNAK_GLOVI1.363e-5650.43Chaperone protein dnaK OS=Gloeobacter violaceus GN... [more]
DNAK_BRAJA1.363e-5650.45Chaperone protein dnaK OS=Bradyrhizobium japonicum... [more]

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Properties
Property NameValue
Genbank descriptionC31003B06EF AbioticL1 Citrus clementina cDNA clone C31003B06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868656 ID=FC868656; Name=FC868656; organism=Citrus clementina; type=EST; length=710bp
ACACCGTCTTTGATGCAAAGAGCTTGATTGGTAGGAGATTCAGCGATGCA
TCAGTCCAAGGAGATATGAAGCTATGGCCATTTAAGGTGATTGCTGGACC
AGCTGACAAGCCCATGATTGGTGTTAACTACAAGGGCGAAGAGAAGCAGT
TTGCTGCTGAGGAAATCTCGTCTATGGTGCTCATCAAGATGCGTGAGATT
GCCGAGGCTTACCTTGGCTCAACTATTAAGAATGCAGTCGTTACTGTCCC
TGCTTACTTCAATGACTCACAGAGGCAGGCCACCAAGGATGCTGGTGTCA
TTGCTGGGCTTAATGTGATGCGTATCATCAATGAGCCCACTGCTGCTGCC
ATTGCTTATGGCCTTGACAAGAAGGCTACTAGTGTGGGTGAGAAGAATGT
GTTGATCTTTGATTTGGGTGGTGGTACTTTTGATGTGTCGTTGCTCACTA
TTGAGGAGGGAATCTTTGAAGTGAAGGCTACTGCTGGAGACACTCATCTT
GGTGGTGAGGATTTTGATAACAGAATGGTGAATCATTTTGTTCAGGAGTT
TAAGAGGAAGAACAAGAAGGATATTAGTGGCAACCCTAGAGCTCTTAGGA
GATTGAGGACTGCTTGTGAGAGAGCGAAGAGGACTCTCTCCTCTACTGCC
CAGACTACAATTGAGATTGATTCTTTGTATGANGGTATTGACTTTCTACT
CACCATAACT
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