FC868656

Overview
NameFC868656
Unique NameFC868656
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length710
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_MYXXD (Chaperone protein dnaK OS=Myxococcus xanthus (strain DK 1622) GN=dnaK PE=2 SV=2)

HSP 1 Score: 217.238 bits (552), Expect = 6.765e-56
Identity = 113/223 (50.67%), Postives = 154/223 (69.06%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNK-KDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            TVF AK LIGR+F     +  + + PFKV + P     + +  KG    ++  E+S++VL+KM++ AE YLG  +  AV+TVPAYFNDSQRQATKDAG IAGL+V+RIINEPTAAA+AYGLD K    G + + ++DLGGGTFD+S+L +  G+FEVK+T GDT LGGEDFD R++++  + F   N   D+  +  AL+RL+ A ERAK  LSS  +T + +
Sbjct:   65 TVFAAKRLIGRKFDSPEGKKAIGVSPFKVASSPNGDAWVEIRGKG----YSPPEVSAIVLMKMKQTAEDYLGEQVSEAVITVPAYFNDSQRQATKDAGRIAGLSVLRIINEPTAAALAYGLD-KVQDGGTERIAVYDLGGGTFDISILELNAGVFEVKSTNGDTFLGGEDFDQRLIDYLAKRFAESNNGLDLRKDRMALQRLKEAAERAKHELSSAPETEVNL 282          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_BLOPB (Chaperone protein dnaK OS=Blochmannia pennsylvanicus (strain BPEN) GN=dnaK PE=2 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 6.765e-56
Identity = 113/226 (50.00%), Postives = 160/226 (70.80%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGRRF D  VQ D+ + P+K+I+  AD     ++ KG++   A  ++S+ +L KM++ AE YLG  I  AV+TVPAYFND+QRQATKD+G IAGL V RIINEPTAAA+AYGLDK+    G + + ++DLGGGTFD+S++ I+    E  FEV +T GDTHLGGEDFD+ ++N+   EFK+  + ++  +P A++RL+ A E+AK  LS++ QT + +
Sbjct:   65 TLFAIKRLIGRRFQDTEVQRDVNIMPYKIIS--ADNGDAWLDVKGQK--MAPPQVSAEILKKMKKTAEDYLGEQISEAVITVPAYFNDAQRQATKDSGRIAGLEVKRIINEPTAAALAYGLDKETR--GNRTIAVYDLGGGTFDISIIEIDDVDGEKTFEVLSTNGDTHLGGEDFDSLLINYLADEFKKDQRINLYNDPLAMQRLKEAAEKAKIELSASHQTDVNL 284          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_XYLFT (Chaperone protein dnaK OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=dnaK PE=2 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 8.835e-56
Identity = 118/226 (52.21%), Postives = 154/226 (68.14%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T +  K LIGR+F DA VQ D+ L P+K+         +      + K+ A +EIS+ VL KM++ AE +LG  +  AV+TVPAYFNDSQRQATKDAG IAGL+V RIINEPTAAA+AYGLDKK    G++ + ++DLGGGTFDVS++ I     E  FEV AT GDT LGGEDFD R++++ V EF +    D+  +P AL+RL+ A ERAK  LSS+ QT + +
Sbjct:   65 TFYAVKRLIGRKFGDAEVQKDLDLVPYKITQHDNGDAWVAT---ADGKKLAPQEISAKVLEKMKKTAEDFLGEKVTEAVITVPAYFNDSQRQATKDAGRIAGLDVKRIINEPTAAALAYGLDKKG---GDRKIAVYDLGGGTFDVSIIEIAEVDGEKQFEVLATNGDTFLGGEDFDKRVIDYLVDEFNKDQGIDLRKDPLALQRLKDAAERAKIELSSSQQTEVNL 284          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_XYLFM (Chaperone protein dnaK OS=Xylella fastidiosa (strain M12) GN=dnaK PE=2 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 8.835e-56
Identity = 118/226 (52.21%), Postives = 154/226 (68.14%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T +  K LIGR+F DA VQ D+ L P+K+         +      + K+ A +EIS+ VL KM++ AE +LG  +  AV+TVPAYFNDSQRQATKDAG IAGL+V RIINEPTAAA+AYGLDKK    G++ + ++DLGGGTFDVS++ I     E  FEV AT GDT LGGEDFD R++++ V EF +    D+  +P AL+RL+ A ERAK  LSS+ QT + +
Sbjct:   65 TFYAVKRLIGRKFGDAEVQKDLDLVPYKITQHDNGDAWVAT---ADGKKLAPQEISAKVLEKMKKTAEDFLGEKVTEAVITVPAYFNDSQRQATKDAGRIAGLDVKRIINEPTAAALAYGLDKKG---GDRKIAVYDLGGGTFDVSIIEIAEVDGEKQFEVLATNGDTFLGGEDFDKRVIDYLVDEFNKDQGIDLRKDPLALQRLKDAAERAKIELSSSQQTEVNL 284          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_XYLF2 (Chaperone protein dnaK OS=Xylella fastidiosa (strain M23) GN=dnaK PE=2 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 8.835e-56
Identity = 118/226 (52.21%), Postives = 154/226 (68.14%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T +  K LIGR+F DA VQ D+ L P+K+         +      + K+ A +EIS+ VL KM++ AE +LG  +  AV+TVPAYFNDSQRQATKDAG IAGL+V RIINEPTAAA+AYGLDKK    G++ + ++DLGGGTFDVS++ I     E  FEV AT GDT LGGEDFD R++++ V EF +    D+  +P AL+RL+ A ERAK  LSS+ QT + +
Sbjct:   65 TFYAVKRLIGRKFGDAEVQKDLDLVPYKITQHDNGDAWVAT---ADGKKLAPQEISAKVLEKMKKTAEDFLGEKVTEAVITVPAYFNDSQRQATKDAGRIAGLDVKRIINEPTAAALAYGLDKKG---GDRKIAVYDLGGGTFDVSIIEIAEVDGEKQFEVLATNGDTFLGGEDFDKRVIDYLVDEFNKDQGIDLRKDPLALQRLKDAAERAKIELSSSQQTEVNL 284          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_RHOFD (Chaperone protein dnaK OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=dnaK PE=2 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 8.835e-56
Identity = 119/226 (52.65%), Postives = 160/226 (70.80%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T++  K LIGR+F++  VQ D+ L P+K+ A  AD     V  +G   + A +++S+ VL KM++ AE YLG T+  AV+TVPAYFND+QRQATKDAG IAGL+V RIINEPTAAA+AYGLDK  T  G++ + +FDLGGGTFDVS++ I     E  FEV +T GDT LGGEDFD R+++  + EFK++   D+  +  AL+RL+ A E+AK  LSS+AQT I +
Sbjct:   65 TLYAVKRLIGRKFTEKEVQKDINLMPYKIAA--ADNGDAWVEVRGN--RMAPQQVSADVLRKMKKTAEDYLGETVTEAVITVPAYFNDAQRQATKDAGRIAGLDVKRIINEPTAAALAYGLDK--TEKGDRKIAVFDLGGGTFDVSIIEIADVDGEKQFEVLSTNGDTFLGGEDFDQRIIDFVIAEFKKEQGVDLGKDVLALQRLKEAAEKAKIELSSSAQTDINL 284          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_PSYIN (Chaperone protein dnaK OS=Psychromonas ingrahamii (strain 37) GN=dnaK PE=2 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 8.835e-56
Identity = 118/226 (52.21%), Postives = 156/226 (69.03%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGRR+ D  VQ D+K+ P+K++   AD     V   G +   A  +IS+ VL KM++ AE YLG  +  AV+TVPAYFND+QRQATKDAG IAGL V RIINEPTAAA AYG+D   +S G+  + ++DLGGGTFD+S++ I+    E  FEV +T GDTHLGGEDFDNR++N  V EFK +   D++ +P A++R++ A E+AK  LSS  QT I +
Sbjct:   64 TLFAIKRLIGRRYEDEEVQRDIKIMPYKIVK--ADNGDAWVEAHGNK--MAPPQISAEVLKKMKKTAEDYLGEKVTGAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAAFAYGVD---SSKGDSVIAVYDLGGGTFDISIIEIDEVDGEKTFEVLSTNGDTHLGGEDFDNRLINFLVAEFKTQQGFDLTNDPLAMQRVKEAAEKAKIELSSAQQTDINL 282          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_BORGA (Chaperone protein dnaK OS=Borrelia garinii GN=dnaK PE=2 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 8.835e-56
Identity = 110/222 (49.55%), Postives = 156/222 (70.27%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T++  K  +GRRF +  V  ++K+ P+K+  G        VN    +KQ +  EIS+  L KM+E AEAYLG  +  AV+TVPAYFND+QRQATKDAG IAGL V RI+NEPTAAA+AYG++KK     E+ V ++DLGGGTFD+S+L + +G+FEVK+T GDTHLGG++FD+ ++ H + EFK+++  D+S +  AL+RL+ A E+AK  LS   + +I +
Sbjct:   65 TIYSIKRFMGRRFEE--VASEIKMVPYKIEKGLNGDAR--VNISNIKKQMSPPEISAATLTKMKETAEAYLGEKVTEAVITVPAYFNDAQRQATKDAGKIAGLEVKRIVNEPTAAALAYGIEKK----HEEIVAVYDLGGGTFDISILELGDGVFEVKSTNGDTHLGGDNFDDEIIKHLISEFKKESAIDLSNDKMALQRLKEAAEKAKIELSGAQEASINL 278          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_BORBZ (Chaperone protein dnaK OS=Borrelia burgdorferi (strain ZS7) GN=dnaK PE=2 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 8.835e-56
Identity = 110/222 (49.55%), Postives = 156/222 (70.27%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T++  K  +GRRF +  V  ++K+ P+K+  G        VN    +KQ +  EIS+  L KM+E AEAYLG  +  AV+TVPAYFND+QRQATKDAG IAGL V RI+NEPTAAA+AYG++KK     E+ V ++DLGGGTFD+S+L + +G+FEVK+T GDTHLGG++FD+ ++ H + EFK+++  D+S +  AL+RL+ A E+AK  LS   + +I +
Sbjct:   65 TIYSIKRFMGRRFEE--VASEIKMVPYKIEKGLNGDAR--VNISNIKKQMSPPEISAATLTKMKETAEAYLGEKVTEAVITVPAYFNDAQRQATKDAGKIAGLEVKRIVNEPTAAALAYGIEKK----HEEIVAVYDLGGGTFDISILELGDGVFEVKSTNGDTHLGGDNFDDEIIKHLISEFKKESAIDLSNDKMALQRLKEAAEKAKIELSGAQEASINL 278          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_BORBU (Chaperone protein dnaK OS=Borrelia burgdorferi GN=dnaK PE=2 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 8.835e-56
Identity = 110/222 (49.55%), Postives = 156/222 (70.27%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T++  K  +GRRF +  V  ++K+ P+K+  G        VN    +KQ +  EIS+  L KM+E AEAYLG  +  AV+TVPAYFND+QRQATKDAG IAGL V RI+NEPTAAA+AYG++KK     E+ V ++DLGGGTFD+S+L + +G+FEVK+T GDTHLGG++FD+ ++ H + EFK+++  D+S +  AL+RL+ A E+AK  LS   + +I +
Sbjct:   65 TIYSIKRFMGRRFEE--VASEIKMVPYKIEKGLNGDAR--VNISNIKKQMSPPEISAATLTKMKETAEAYLGEKVTEAVITVPAYFNDAQRQATKDAGKIAGLEVKRIVNEPTAAALAYGIEKK----HEEIVAVYDLGGGTFDISILELGDGVFEVKSTNGDTHLGGDNFDDEIIKHLISEFKKESAIDLSNDKMALQRLKEAAEKAKIELSGAQEASINL 278          
The following BLAST results are available for this feature:
BLAST of FC868656 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_MYXXD6.765e-5650.67Chaperone protein dnaK OS=Myxococcus xanthus (stra... [more]
DNAK_BLOPB6.765e-5650.00Chaperone protein dnaK OS=Blochmannia pennsylvanic... [more]
DNAK_XYLFT8.835e-5652.21Chaperone protein dnaK OS=Xylella fastidiosa (stra... [more]
DNAK_XYLFM8.835e-5652.21Chaperone protein dnaK OS=Xylella fastidiosa (stra... [more]
DNAK_XYLF28.835e-5652.21Chaperone protein dnaK OS=Xylella fastidiosa (stra... [more]
DNAK_RHOFD8.835e-5652.65Chaperone protein dnaK OS=Rhodoferax ferrireducens... [more]
DNAK_PSYIN8.835e-5652.21Chaperone protein dnaK OS=Psychromonas ingrahamii ... [more]
DNAK_BORGA8.835e-5649.55Chaperone protein dnaK OS=Borrelia garinii GN=dnaK... [more]
DNAK_BORBZ8.835e-5649.55Chaperone protein dnaK OS=Borrelia burgdorferi (st... [more]
DNAK_BORBU8.835e-5649.55Chaperone protein dnaK OS=Borrelia burgdorferi GN=... [more]

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Properties
Property NameValue
Genbank descriptionC31003B06EF AbioticL1 Citrus clementina cDNA clone C31003B06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868656 ID=FC868656; Name=FC868656; organism=Citrus clementina; type=EST; length=710bp
ACACCGTCTTTGATGCAAAGAGCTTGATTGGTAGGAGATTCAGCGATGCA
TCAGTCCAAGGAGATATGAAGCTATGGCCATTTAAGGTGATTGCTGGACC
AGCTGACAAGCCCATGATTGGTGTTAACTACAAGGGCGAAGAGAAGCAGT
TTGCTGCTGAGGAAATCTCGTCTATGGTGCTCATCAAGATGCGTGAGATT
GCCGAGGCTTACCTTGGCTCAACTATTAAGAATGCAGTCGTTACTGTCCC
TGCTTACTTCAATGACTCACAGAGGCAGGCCACCAAGGATGCTGGTGTCA
TTGCTGGGCTTAATGTGATGCGTATCATCAATGAGCCCACTGCTGCTGCC
ATTGCTTATGGCCTTGACAAGAAGGCTACTAGTGTGGGTGAGAAGAATGT
GTTGATCTTTGATTTGGGTGGTGGTACTTTTGATGTGTCGTTGCTCACTA
TTGAGGAGGGAATCTTTGAAGTGAAGGCTACTGCTGGAGACACTCATCTT
GGTGGTGAGGATTTTGATAACAGAATGGTGAATCATTTTGTTCAGGAGTT
TAAGAGGAAGAACAAGAAGGATATTAGTGGCAACCCTAGAGCTCTTAGGA
GATTGAGGACTGCTTGTGAGAGAGCGAAGAGGACTCTCTCCTCTACTGCC
CAGACTACAATTGAGATTGATTCTTTGTATGANGGTATTGACTTTCTACT
CACCATAACT
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