FC868656

Overview
NameFC868656
Unique NameFC868656
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length710
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_CHLMU (Chaperone protein dnaK OS=Chlamydia muridarum GN=dnaK PE=2 SV=2)

HSP 1 Score: 214.157 bits (544), Expect = 5.727e-55
Identity = 116/230 (50.43%), Postives = 158/230 (68.70%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYXGID 692
            T+   K  IGR+FS+  V+ ++K  P+KV        +  V    E K +  EEI + +L+KM+E AEAYLG T+  AV+TVPAYFNDSQR +TKDAG IAGL+V RII EPTAAA+AYG+DK+    G+K + +FDLGGGTFD+S+L I +G+FEV +T GDTHLGG+DFD  ++N  + EFK++   D+S +  AL+RL+ A E+AK  LS  + T  EI+  +  ID
Sbjct:   70 TLASTKRFIGRKFSE--VESEIKTVPYKVAPNSKGDAVFEV----ENKLYTPEEIGAQILMKMKETAEAYLGETVTEAVITVPAYFNDSQRASTKDAGRIAGLDVKRIIPEPTAAALAYGIDKE----GDKKIAVFDLGGGTFDISILEIGDGVFEVLSTNGDTHLGGDDFDEVIINWMLGEFKKQEGIDLSKDNMALQRLKDAAEKAKIELSGVSST--EINQPFITID 287          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_CHLCH (Chaperone protein dnaK OS=Chlorobium chlorochromatii (strain CaD3) GN=dnaK PE=2 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 5.727e-55
Identity = 112/222 (50.45%), Postives = 156/222 (70.27%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K  +GRRF +  V  + K+ P+++I    +        K  +K ++ +EIS+MVL KM++ AE +LG  +  AV+TVPAYFND+QRQATKDAG IAGL V RIINEPTAAA+AYGLDKK  S   + V +FDLGGGTFD+S+L + EG+FEVK+T GDTHLGG+DFD +++++  +EFK++   D+  +   L+RL+ A E+AK  LSS + T I +
Sbjct:   65 TIFSIKRFMGRRFDE--VGEEKKMAPYELINDSGE-----ARVKINDKVYSPQEISAMVLQKMKQTAEDFLGEKVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKKNAS---EKVAVFDLGGGTFDISILELGEGVFEVKSTDGDTHLGGDDFDQKIIDYIAEEFKKQEGIDLRKDAITLQRLKEAAEKAKIELSSRSDTEINL 276          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_CELJU (Chaperone protein dnaK OS=Cellvibrio japonicus (strain Ueda107) GN=dnaK PE=2 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 5.727e-55
Identity = 119/226 (52.65%), Postives = 154/226 (68.14%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T+F  K LIGR+F D  VQ D+ + P+K++A  AD     V  KGE+K  A  +IS+ VL KM++ AE YLG  +  AV+TVPAYFNDSQRQATKDAG IAGL+V RIINEPTAAA+AYGLDK     G+  + ++DLGGGTFD+S++ I     E  FEV +T GDT LGGEDFD R++      FK+    D+  +P AL+RL+ A E+AK  LSS+ QT + +
Sbjct:   65 TLFAVKRLIGRKFKDDVVQKDISMVPYKIVA--ADNGDAWVEVKGEKK--APPQISAEVLKKMKKTAEDYLGEKVTEAVITVPAYFNDSQRQATKDAGKIAGLDVKRIINEPTAAALAYGLDK---GKGDHTIAVYDLGGGTFDISIIEIADVDGEHQFEVLSTNGDTFLGGEDFDMRLIEFLADSFKKDTGIDLHNDPLALQRLKEAAEKAKIELSSSQQTEVNL 283          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: HSP71_TRYCR (Heat shock 70 kDa protein, mitochondrial OS=Trypanosoma cruzi GN=MTP70 PE=3 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 9.769e-55
Identity = 111/222 (50.00%), Postives = 150/222 (67.57%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T F  K LIGRRF D+++Q D+K  P+K+         +        KQ++  ++ + VL KM+E AE +LG  + NAVVT PAYFN  QRQATKDAG IAGLNV+R++N PTAAA+AYGLDK   S+    + ++DLGGGTFD+S+L I  G+FEVKAT GDTHLGGEDFD  + ++ + EFK+    D+S    AL+R+R A E+AK  LS+T +T + +
Sbjct:   89 TFFAVKRLIGRRFEDSNIQHDIKNVPYKIGRSSNGDAWV---QDANGKQYSPSQVGAFVLEKMKETAENFLGRKVSNAVVTCPAYFNGPQRQATKDAGTIAGLNVIRVVNGPTAAALAYGLDKTKDSM----IAVYDLGGGTFDISVLEIAGGVFEVKATNGDTHLGGEDFDLCLSDYILTEFKKSTGIDLSNERMALQRIREAAEKAKCELSTTMETEVNL 303          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_XANC5 (Chaperone protein dnaK OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=dnaK PE=2 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 9.769e-55
Identity = 116/226 (51.33%), Postives = 154/226 (68.14%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T +  K LIGR+F+D  VQ D+   P+ ++A       +  +   + K+ A +EIS+ VL KM++ AE +LG  +  AV+TVPAYFNDSQRQATKDAG IAGL+V RIINEPTAAA+AYGLDK     G++ + ++DLGGGTFDVS++ I     E  FEV AT GDT LGGEDFDNR++ + V EF +    D+  +P AL+RL+ A ERAK  LSS+ QT + +
Sbjct:   65 TFYAVKRLIGRKFTDGEVQKDISHVPYGILAHDNGDAWVQTS---DAKRMAPQEISARVLEKMKKTAEDFLGEKVTEAVITVPAYFNDSQRQATKDAGRIAGLDVKRIINEPTAAALAYGLDKNG---GDRKIAVYDLGGGTFDVSIIEIAEVDGEKQFEVLATNGDTFLGGEDFDNRVIEYLVDEFNKDQGIDLRKDPLALQRLKDAAERAKIELSSSQQTEVNL 284          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_STRM5 (Chaperone protein dnaK OS=Stenotrophomonas maltophilia (strain R551-3) GN=dnaK PE=2 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 9.769e-55
Identity = 116/226 (51.33%), Postives = 155/226 (68.58%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T +  K LIGR+F+DA VQ D+   P+ ++A       +  +   + K+ A +EIS+ VL KM++ AE +LG  +  AV+TVPAYFNDSQRQATKDAG IAGL+V RIINEPTAAA+AYGLDK      ++ ++++DLGGGTFDVS++ I     E  FEV AT GDT LGGEDFDNR++ + V+EF +    D+  +P AL+RL+ A ERAK  LSS  QT + +
Sbjct:   65 TFYAVKRLIGRKFTDAEVQKDIAHVPYSILAHDNGDAWVATS---DAKKMAPQEISAKVLEKMKKTAEDFLGEKVTEAVITVPAYFNDSQRQATKDAGRIAGLDVKRIINEPTAAALAYGLDKGDNK--DRKIVVYDLGGGTFDVSVIEIANVDGEKQFEVLATNGDTFLGGEDFDNRVIEYLVEEFNKDQGIDLRKDPLALQRLKDAAERAKIELSSAQQTEVNL 285          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_RUBXD (Chaperone protein dnaK OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=dnaK PE=2 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 9.769e-55
Identity = 111/222 (50.00%), Postives = 158/222 (71.17%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            TV+  K  +GRR++D  V+ + +   ++V+ GP     + +     +K ++  EIS+M+L K++  AE YLG  + +AV+TVPAYF D+QRQATKDAG IAGLNV RIINEPTAAA+AYGLDK+     ++ +L+FDLGGGTFDVS+L + +G+FEVKAT+G+ HLGG+DFD ++V   V+EFK+    D+S +  A++RL  A E+AK+ LSST  T I +
Sbjct:   66 TVYSIKRFMGRRYND--VKQEAERVGYQVVPGPHGDVRVRLG----DKDYSPPEISAMILQKLKRDAEDYLGEEVTDAVITVPAYFEDAQRQATKDAGRIAGLNVKRIINEPTAAALAYGLDKE----NDQTILVFDLGGGTFDVSILELGDGVFEVKATSGNNHLGGDDFDAKVVEWIVEEFKKAEGIDLSRDKMAMQRLVEAAEKAKKELSSTTSTNINL 277          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_CYAME (Chaperone protein dnaK OS=Cyanidioschyzon merolae GN=dnaK PE=3 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 9.769e-55
Identity = 115/222 (51.80%), Postives = 156/222 (70.27%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            T +  K  IGR+FS+  ++ + K  P+ V A    K  + +    ++K FA EEIS+ VL K+ + A  YLG  +  AV+TVPAYFNDSQRQATKDAG IAGL+V+RIINEPTAA++AYGLDKK+     + +L+FDLGGGTFDVS+L I +G+FEV AT+GDTHLGG+DFD ++V+  +  +KR    D+S + +AL+RL  A E+AK  LS+  QT I +
Sbjct:   65 TFYSVKRFIGRKFSE--IEQEAKQVPYPVQAD--GKGNVRIFCSAKDKFFAPEEISAQVLRKLVDSASQYLGEKVTQAVITVPAYFNDSQRQATKDAGKIAGLDVLRIINEPTAASLAYGLDKKS----NEKILVFDLGGGTFDVSILEIGDGVFEVLATSGDTHLGGDDFDKKIVDWLIDNWKRIEGIDLSKDKQALQRLTEAAEKAKIELSNVTQTDINL 278          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_ACIF5 (Chaperone protein dnaK OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=dnaK PE=2 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 9.769e-55
Identity = 113/226 (50.00%), Postives = 156/226 (69.03%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            TV++ K LIGR+F DA VQ D+K  P+KVI        + V     +K+++A++IS+ +L KM++ AE YLG  +  AV+TVPAYFND+QRQATKDAG IAGL V RIINEPTAAA+A+G DKK    G+  + ++DLGGGTFD+S++ I     E  FEV +T GDT LGG DFD+R++N+    FK ++  D+ G+  A++RL+ A E+AK  LSS  QT + +
Sbjct:   65 TVYEVKRLIGRKFDDAEVQKDLKHVPYKVIKADNGDAWVEVR----DKKYSAQQISAFILQKMKKTAEDYLGEKVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAFGEDKKP---GDSKIAVYDLGGGTFDISIIEIAEMEGEHQFEVLSTNGDTFLGGGDFDSRVINYLADSFKAESGIDLRGDRLAMQRLKEAAEKAKIELSSAQQTDVNL 283          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: DNAK_ACIF2 (Chaperone protein dnaK OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=dnaK PE=2 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 9.769e-55
Identity = 113/226 (50.00%), Postives = 156/226 (69.03%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 668
            TV++ K LIGR+F DA VQ D+K  P+KVI        + V     +K+++A++IS+ +L KM++ AE YLG  +  AV+TVPAYFND+QRQATKDAG IAGL V RIINEPTAAA+A+G DKK    G+  + ++DLGGGTFD+S++ I     E  FEV +T GDT LGG DFD+R++N+    FK ++  D+ G+  A++RL+ A E+AK  LSS  QT + +
Sbjct:   65 TVYEVKRLIGRKFDDAEVQKDLKHVPYKVIKADNGDAWVEVR----DKKYSAQQISAFILQKMKKTAEDYLGEKVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAFGEDKKP---GDSKIAVYDLGGGTFDISIIEIAEMEGEHQFEVLSTNGDTFLGGGDFDSRVINYLADSFKAESGIDLRGDRLAMQRLKEAAEKAKIELSSAQQTDVNL 283          
The following BLAST results are available for this feature:
BLAST of FC868656 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_CHLMU5.727e-5550.43Chaperone protein dnaK OS=Chlamydia muridarum GN=d... [more]
DNAK_CHLCH5.727e-5550.45Chaperone protein dnaK OS=Chlorobium chlorochromat... [more]
DNAK_CELJU5.727e-5552.65Chaperone protein dnaK OS=Cellvibrio japonicus (st... [more]
HSP71_TRYCR9.769e-5550.00Heat shock 70 kDa protein, mitochondrial OS=Trypan... [more]
DNAK_XANC59.769e-5551.33Chaperone protein dnaK OS=Xanthomonas campestris p... [more]
DNAK_STRM59.769e-5551.33Chaperone protein dnaK OS=Stenotrophomonas maltoph... [more]
DNAK_RUBXD9.769e-5550.00Chaperone protein dnaK OS=Rubrobacter xylanophilus... [more]
DNAK_CYAME9.769e-5551.80Chaperone protein dnaK OS=Cyanidioschyzon merolae ... [more]
DNAK_ACIF59.769e-5550.00Chaperone protein dnaK OS=Acidithiobacillus ferroo... [more]
DNAK_ACIF29.769e-5550.00Chaperone protein dnaK OS=Acidithiobacillus ferroo... [more]

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Properties
Property NameValue
Genbank descriptionC31003B06EF AbioticL1 Citrus clementina cDNA clone C31003B06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868656 ID=FC868656; Name=FC868656; organism=Citrus clementina; type=EST; length=710bp
ACACCGTCTTTGATGCAAAGAGCTTGATTGGTAGGAGATTCAGCGATGCA
TCAGTCCAAGGAGATATGAAGCTATGGCCATTTAAGGTGATTGCTGGACC
AGCTGACAAGCCCATGATTGGTGTTAACTACAAGGGCGAAGAGAAGCAGT
TTGCTGCTGAGGAAATCTCGTCTATGGTGCTCATCAAGATGCGTGAGATT
GCCGAGGCTTACCTTGGCTCAACTATTAAGAATGCAGTCGTTACTGTCCC
TGCTTACTTCAATGACTCACAGAGGCAGGCCACCAAGGATGCTGGTGTCA
TTGCTGGGCTTAATGTGATGCGTATCATCAATGAGCCCACTGCTGCTGCC
ATTGCTTATGGCCTTGACAAGAAGGCTACTAGTGTGGGTGAGAAGAATGT
GTTGATCTTTGATTTGGGTGGTGGTACTTTTGATGTGTCGTTGCTCACTA
TTGAGGAGGGAATCTTTGAAGTGAAGGCTACTGCTGGAGACACTCATCTT
GGTGGTGAGGATTTTGATAACAGAATGGTGAATCATTTTGTTCAGGAGTT
TAAGAGGAAGAACAAGAAGGATATTAGTGGCAACCCTAGAGCTCTTAGGA
GATTGAGGACTGCTTGTGAGAGAGCGAAGAGGACTCTCTCCTCTACTGCC
CAGACTACAATTGAGATTGATTCTTTGTATGANGGTATTGACTTTCTACT
CACCATAACT
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