FC868658
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_HUMAN (Aminomethyltransferase, mitochondrial OS=Homo sapiens GN=AMT PE=1 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 8.299e-40 Identity = 80/158 (50.63%), Postives = 111/158 (70.25%), Query Frame = 2 Query: 212 ENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685 E L++T L+DFH+A+GGKMV FAGWS+P+QY+DS +S L+ RQ+ SLFDVSHM + G D V +E LV+ D+A L P GTL++FTNE GG +DD ++T + H+Y+V NAGC +KDLA ++ ++ +G DV + D +LLALQGP A Sbjct: 31 EVLRRTPLYDFHLAHGGKMVAFAGWSLPVQYRDSHTDSHLHTRQHCSLFDVSHMLQTKILGSDRVKLMESLVVGDIAELRPNQGTLSLFTNEAGGILDDLIVTNTSEGHLYVVSNAGCWEKDLALMQDKVRELQNQGRDVGLEVLD-NALLALQGPTA 187
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_CANFA (Aminomethyltransferase, mitochondrial OS=Canis familiaris GN=AMT PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 7.026e-39 Identity = 79/156 (50.64%), Postives = 110/156 (70.51%), Query Frame = 2 Query: 218 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685 L++T L+DFH+A+GGKMV FAGWS+P+QY+DS ++S L+ R++ SLFDVSHM + G D V +E LV+ D+A L P GTL++FTNE GG DD ++T + ++Y+V NAGC DKDLA ++ ++ G DVS + D +LLALQGP A Sbjct: 33 LRRTPLYDFHLAHGGKMVAFAGWSLPVQYRDSHVDSHLHTRRHCSLFDVSHMLQTKILGCDRVKLMESLVVGDIAELRPNQGTLSLFTNEAGGIEDDLIVTSTSEGYLYVVSNAGCWDKDLALMQGKVRELQNMGSDVSLEVVD-NALLALQGPTA 187
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_DICDI (Aminomethyltransferase, mitochondrial OS=Dictyostelium discoideum GN=gcvT PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 5.948e-38 Identity = 82/166 (49.40%), Postives = 110/166 (66.27%), Query Frame = 2 Query: 188 RRHFASDAENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKG--GDVSWHIHDERSLLALQGP 679 +R+F+S E LKKTAL++ H G KMVPF GW MP+QY +M+ L+ R+ LFDVSHM L + GKD V F E +V+AD+ L G L+VFTNE GG IDD++IT D +Y+VVNAGC DKD++HI +K F + DVS + ++ SL+A+QGP Sbjct: 15 KRYFSSSNE-LKKTALNELHKELGAKMVPFCGWEMPVQYPAGVMKEHLHVRKESGLFDVSHMGQLRIHGKDRVKFFESIVVADLQALPTGHSKLSVFTNEKGGIIDDTMITNA-GDSLYVVVNAGCADKDISHINEKIKEFKSVNPTHDVSMQLLEDLSLIAIQGP 178
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_YEAST (Aminomethyltransferase, mitochondrial OS=Saccharomyces cerevisiae GN=GCV1 PE=1 SV=2) HSP 1 Score: 135.576 bits (340), Expect = 2.420e-31 Identity = 79/172 (45.93%), Postives = 102/172 (59.30%), Query Frame = 2 Query: 176 KTIARRHFASDAENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSI-MESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDH-IYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685 K I + F S LKKTALHD HV+ GG MVP+AG+SMP+ YK +ES R N LFDVSHM L G V FL+++ D L G+GTL+V N GG +DD++ITK DD+ Y+V NAGC ++D +++ + D W I + RSLLALQGP A Sbjct: 5 KKIVFKRFNS---TLKKTALHDLHVSLGGTMVPYAGYSMPVLYKGQTHIESHNWTRTNAGLFDVSHMLQSKLSGPHSVKFLQRVTPTDFNALPVGSGTLSVLLNPQGGVVDDTIITKENDDNEFYIVTNAGCAERDTEFFHDELQNGSTL--DCQWKIIEGRSLLALQGPKA 171
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_SCHPO (Probable aminomethyltransferase, mitochondrial OS=Schizosaccharomyces pombe GN=gcv1 PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 4.723e-27 Identity = 65/167 (38.92%), Postives = 105/167 (62.87%), Query Frame = 2 Query: 182 IARRHFASDAENLKKTALHDFHVANGGKMVPFAGWSMPIQYK-DSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGP 679 + R+ + + +LK+T L+D H+ G +VPFAG+SMP+QYK +I S R++ LFDVSHM ++G++ +LE + + + L P TL+ FTNE GG IDD++I+K ++ Y+V NA C +KD A+++ H++++ KG V R+L+A+QGP Sbjct: 10 LKRQSSTAASSSLKRTPLYDLHLKEGATIVPFAGFSMPVQYKGQTISASHKWTREHSGLFDVSHMVQWFVRGENATAYLESITPSSLKELKPFHSTLSAFTNETGGIIDDTIISKQDENTYYIVTNAACSEKDEANLKKHIENW--KG--VELERVQGRALIAIQGP 172
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_THEMA (Aminomethyltransferase OS=Thermotoga maritima GN=gcvT PE=1 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 6.821e-26 Identity = 65/156 (41.67%), Postives = 91/156 (58.33%), Query Frame = 2 Query: 218 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685 +K+T L + HV G KMV FAGW MP+ Y SI E + R++ +FDVSHM +KG + V F++ L+ D + L G +V NENGG IDD V+ KV D +VVNA +KD I++H K+F + ++S D +L+A QGP A Sbjct: 1 MKRTPLFEKHVELGAKMVDFAGWEMPLYYT-SIFEEVMAVRKSVGMFDVSHMGEFLVKGPEAVSFIDFLITNDFSSLPDGKAIYSVMCNENGGIIDDLVVYKVSPDEALMVVNAANIEKDFNWIKSHSKNFDVEVSNIS----DTTALIAFQGPKA 151
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_THESQ (Aminomethyltransferase OS=Thermotoga sp. (strain RQ2) GN=gcvT PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.985e-25 Identity = 64/156 (41.03%), Postives = 91/156 (58.33%), Query Frame = 2 Query: 218 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685 +K+T L + HV G KMV FAGW MP+ Y SI E + R++ +FDVSHM +KG + V F++ L+ + + L G +V NENGG IDD V+ KV D +VVNA +KD I++H K+F + ++S D +L+A QGP A Sbjct: 1 MKRTPLFEKHVELGAKMVDFAGWEMPLYYT-SIFEEVMAVRKSVGMFDVSHMGEFLVKGPEAVSFIDFLITNNFSSLPDGKALYSVMCNENGGIIDDLVVYKVSPDEALMVVNAANIEKDFNWIKSHSKNFNVEVSNIS----DTTALIAFQGPRA 151
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_THEP1 (Aminomethyltransferase OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=gcvT PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.592e-25 Identity = 65/156 (41.67%), Postives = 90/156 (57.69%), Query Frame = 2 Query: 218 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685 +K+T L + HV G KMV FAGW MP+ Y SI E + R++ +FDVSHM +KG + V F++ L+ D + L G +V NENGG IDD V+ KV D +VVNA +KD I++H K+F + +I D +L+A QGP A Sbjct: 1 MKRTPLFEKHVGLGAKMVDFAGWEMPLYYT-SIFEEVMAVRKSVGMFDVSHMGEFLVKGPEAVSFIDFLITNDFSSLPDGKAIYSVMCNENGGIIDDLVVYKVSPDEALMVVNAANIEKDFNWIKSHSKNFDVE----ILNISDTTALIAFQGPEA 151
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_THENN (Aminomethyltransferase OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=gcvT PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.541e-25 Identity = 62/154 (40.26%), Postives = 92/154 (59.74%), Query Frame = 2 Query: 218 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGP 679 +K+T L++ HVA G KMV FAGW MP+ Y SI E + R++ +FDVSHM + ++G++ V F+ LV D + + G TV NE GG +DD V+ ++ + +VVNA +KD I+ H K+F + +VS DE +L+A QGP Sbjct: 1 MKRTPLYERHVALGAKMVDFAGWIMPLYYS-SIFEEVMAVRKSVGVFDVSHMGEIVVEGQETVDFVNFLVTNDFSAIPEGKAMYTVMCNETGGIVDDLVVYRISHEKAIMVVNAANIEKDYEWIKVHAKNFNVEVRNVS----DETALVAFQGP 149
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_YERPS (Aminomethyltransferase OS=Yersinia pseudotuberculosis GN=gcvT PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.866e-24 Identity = 67/156 (42.95%), Postives = 89/156 (57.05%), Query Frame = 2 Query: 221 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLA-PGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685 K+T L+D HVA G +MV F GW MP+ Y I E L RQ+ +FDVSHM + L G FL L+ DVA L PG T NE+GG IDD ++ + +D+ LVVN+ RDKDLA I H + + V + D+ +L+A+QGP A Sbjct: 3 KQTPLYDQHVACGARMVDFHGWMMPLHYGSQIDEHHL-VRQDAGMFDVSHMTIVDLHGNRTREFLRYLLANDVAKLTQPGKALYTGMLNESGGVIDDLIVYFLSEDYFRLVVNSATRDKDLAWISQHAEPY-----QVEVTVRDDLALIAVQGPQA 152 The following BLAST results are available for this feature:
BLAST of FC868658 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 330
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868658 ID=FC868658; Name=FC868658; organism=Citrus clementina; type=EST; length=685bpback to top |