FC868658
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_SHEPW (Aminomethyltransferase OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=gcvT PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.510e-20 Identity = 60/155 (38.71%), Postives = 83/155 (53.55%), Query Frame = 2 Query: 224 KTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685 KT L + H+ + GKMV F GW MP+ Y I E RQ+ +FDVSHM + + G D FL KL+ DVA L PG + NGG IDD + + D +VVN+ R+KDLA I +K F+ + + E +++A+QGP A Sbjct: 4 KTVLFNKHLESNGKMVDFHGWDMPLNYGSQIEEHHA-VRQDAGMFDVSHMTVVDVIGDDACAFLRKLLANDVAKLKVPGKALYGGMLDHNGGVIDDLITYYLSDTQYRIVVNSATREKDLAWINEQVKGFSVEVTE-----RPELAMIAVQGPNA 152
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_SHEPA (Aminomethyltransferase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=gcvT PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.510e-20 Identity = 60/155 (38.71%), Postives = 83/155 (53.55%), Query Frame = 2 Query: 224 KTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685 KT L + H+ + GKMV F GW MP+ Y I E RQ+ +FDVSHM + + G D FL KL+ DVA L PG + NGG IDD + + D +VVN+ R+KDLA I +K F+ + + E +++A+QGP A Sbjct: 4 KTVLFNKHLESNGKMVDFHGWDMPLNYGSQIEEHHA-VRQDAGMFDVSHMTVVDVIGDDACAFLRKLLANDVAKLKVPGKALYGGMLDHNGGVIDDLITYYLSDTEYRIVVNSATREKDLAWINEQVKGFSVEVTE-----RPELAMIAVQGPNA 152
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_SHEFN (Aminomethyltransferase OS=Shewanella frigidimarina (strain NCIMB 400) GN=gcvT PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.510e-20 Identity = 63/155 (40.65%), Postives = 81/155 (52.26%), Query Frame = 2 Query: 224 KTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLA-PGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685 KT L + H+ + KMV F GW MPI Y I E RQ+ +FDVSHM + + G D FL KL+ DVA L PG +EN G IDD + + D H +VVN+ RDKDLA I +F DV E +++A+QGP A Sbjct: 4 KTVLFNKHLESKAKMVDFHGWEMPINYGSQIEEHHA-VRQDAGMFDVSHMTVVDVTGSDACAFLRKLLANDVAKLTVPGKALYGGMLDENAGIIDDLITYYLTDTHYRVVVNSATRDKDLAWINKQAAAF-----DVVVTERPELAMIAVQGPNA 152
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_PROMM (Aminomethyltransferase OS=Prochlorococcus marinus (strain MIT 9313) GN=gcvT PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.510e-20 Identity = 61/162 (37.65%), Postives = 82/162 (50.62%), Query Frame = 2 Query: 215 NLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVI-----TKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685 NL+ T LHD GG+MVPFAGW MP+Q+ + E RQ +FD+SHM L L+G + L+ LV D+ + PG TV NE GG +DD VI K + +V+NA C D ++ H++ D + LLALQGP A Sbjct: 2 NLQHTPLHDLCRDAGGRMVPFAGWDMPVQFSGLLQEHQA-VRQQVGMFDISHMGVLRLEGTNPKDHLQALVPTDLNRIGPGEACYTVLLNETGGILDDLVIYDLGTNKQDSQSLLIVINAACSKTDTIWLKQHLQPAGIALSDAK----NNGVLLALQGPQA 158
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_CLOBK (Aminomethyltransferase OS=Clostridium botulinum (strain Okra / Type B1) GN=gcvT PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.510e-20 Identity = 61/158 (38.61%), Postives = 86/158 (54.43%), Query Frame = 2 Query: 212 ENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685 E+LK T L + GGK+V FAG+ +P Q+K + E R+ LFDVSHM + + GKD F++ L+ D+ L T NE+GG IDD ++ K ++ +LV+NA +DKD+ I H F + D S D + LALQGPLA Sbjct: 2 EDLKVTPLRGVYEEYGGKIVDFAGYELPTQFKGFLHEHH-TVREKAGLFDVSHMGEVMVTGKDAGKFIQYLMTNDINILKDNEVLYTFMCNEDGGVIDDLLVYKFAENEFFLVINASNKDKDVKWIMDHKGDFDVEIVDES----DSIAQLALQGPLA 154
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_METCA (Aminomethyltransferase OS=Methylococcus capsulatus GN=gcvT PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.279e-20 Identity = 55/152 (36.18%), Postives = 86/152 (56.58%), Query Frame = 2 Query: 227 TALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLA-PGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGP 679 TALH+ H+A G +M F+GW +P+ Y I E R+ +FDVSH+ + ++G PFL +++ DVA LA PG N++GG +DD V+ + D L++NAG R+KDL+ + F+ V+ D+ +++ALQGP Sbjct: 5 TALHEEHLALGARMTEFSGWELPLHYGSQIAEHHA-VRRAAGMFDVSHLGVVDVEGLQAAPFLRRVLANDVARLAEPGRMLYGCMLNQDGGIVDDLVVGFIDDRRFRLILNAGTREKDLSWLHRQAAPFS-----VTVTPRDDLAMIALQGP 150
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_ACIBL (Aminomethyltransferase OS=Acidobacteria bacterium (strain Ellin345) GN=gcvT PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.279e-20 Identity = 53/157 (33.76%), Postives = 87/157 (55.41%), Query Frame = 2 Query: 215 NLKKTALHDFHVANGGKMVPFAGWSMPIQYKD--SIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGP 679 N++KTAL+ H +G KMV ++GW MP++Y +M+ L R LFDVSHM + + G + + ++ L + D + L G + NG +DD ++ K DD LV+NAG R+KD+ ++ + + F D+S D+ + +A+QGP Sbjct: 8 NIRKTALNATHRQSGAKMVDYSGWDMPVEYPSVGGLMKEHLAVRAGVGLFDVSHMGDIRVHGPEALKAVQYLTMNDASKLNTGQAQYSAMLYPNGTFVDDVIVHKFADDDYLLVINAGTREKDVNWVKDNTRQFKVTVEDLS----DQFTQIAIQGP 160
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_SHEWM (Aminomethyltransferase OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=gcvT PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.282e-20 Identity = 61/155 (39.35%), Postives = 81/155 (52.26%), Query Frame = 2 Query: 224 KTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685 KT L + H+ + KMV F GW MP+ Y I E RQ+ +FDVSHM + + G D FL KL+ DVA L PG + N G IDD + + D H +VVN+ R+KDLA I +K F DV E +++A+QGP A Sbjct: 4 KTVLFNKHLESDAKMVDFHGWDMPLNYGSQIEEHHA-VRQDAGMFDVSHMTVVDVNGTDACAFLRKLLANDVAKLKVPGKALYGGMLDHNAGVIDDLITYYLNDTHYRIVVNSATREKDLAWIAQEVKGF-----DVVITERPELAMIAVQGPNA 152
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_SHESH (Aminomethyltransferase OS=Shewanella sediminis (strain HAW-EB3) GN=gcvT PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.282e-20 Identity = 61/155 (39.35%), Postives = 81/155 (52.26%), Query Frame = 2 Query: 224 KTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685 KT L + H+ + KMV F GW MP+ Y I E RQ+ +FDVSHM + + G D FL KL+ DVA L PG + N G IDD + + D H +VVN+ R+KDLA I +K F DV E +++A+QGP A Sbjct: 4 KTVLFNKHLESDAKMVDFHGWDMPLNYGSQIEEHNA-VRQDAGMFDVSHMTVVDVTGTDACAFLRKLLANDVAKLKVPGKALYGGMLDHNAGVIDDLITYYLTDTHYRVVVNSATREKDLAWIAEQVKGF-----DVEIVERPELAMIAVQGPNA 152
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_BORPD (Aminomethyltransferase OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=gcvT PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.282e-20 Identity = 61/158 (38.61%), Postives = 86/158 (54.43%), Query Frame = 2 Query: 215 NLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685 +LK+T L D HVA G +MV F GW MP+ Y S +E R++ +FDVSHM + + G D FL +LV DVA L PG + N GG IDD ++ D +VVNA DKD+A ++ + A DV+ + +++A+QGP A Sbjct: 4 SLKRTPLADAHVAAGARMVDFGGWDMPLAY-GSQLEEHHAVRRDAGMFDVSHMLNVDVTGPDATAFLRRLVANDVARLTVPGKALYSCMLNPQGGIIDDLIVYFFAADQWRVVVNAATADKDVAWMQ---RVAAAGSYDVAIAPRRDLAMVAVQGPNA 157 The following BLAST results are available for this feature:
BLAST of FC868658 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 330
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868658 ID=FC868658; Name=FC868658; organism=Citrus clementina; type=EST; length=685bpback to top |